Os04g0558400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Acyl-CoA thioesterase family protein.
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Os04g0558400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Acyl-CoA thioesterase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.36 | 0.271 | 12.6 | -0.482 | 0.323 | 0.566 | -0.245 | -1.33 | 0.24 | 10.6 | 1.2 | 157 | -- | -- |
| 34.88 | 0.275 | 12.6 | -0.492 | 0.333 | 0.448 | -0.343 | -- | 0.223 | 10.9 | 1.293 | 163 | -- | -- |
| 33.6 | 0.27 | 12.6 | -0.488 | 0.326 | 0.575 | -- | -1.39 | 0.24 | 10.4 | 1.2 | 157 | -- | -- |
| 35.19 | 0.276 | 12.6 | -0.542 | 0.321 | 0.45 | -- | -- | 0.226 | 10.7 | 1.3 | 163 | -- | -- |
| 39.81 | 0.294 | 12.6 | -0.497 | -- | 0.495 | -- | -1.04 | 0.237 | -- | 1.499 | 128 | -- | -- |
| 37.6 | 0.287 | 12.6 | -0.601 | 0.33 | -- | -0.336 | -- | 0.266 | 12.6 | -- | -- | -- | -- |
| 38.07 | 0.289 | 12.6 | -0.614 | 0.331 | -- | -- | -- | 0.264 | 12.5 | -- | -- | -- | -- |
| 41 | 0.298 | 12.6 | -0.534 | -- | 0.39 | -- | -- | 0.224 | -- | 1.448 | 128 | -- | -- |
| 41.95 | 0.302 | 12.6 | -- | 0.331 | 0.575 | -- | -- | 0.267 | 9.9 | 1.5 | 168 | -- | -- |
| 44.94 | 0.313 | 12.6 | -0.626 | -- | -- | -- | -- | 0.258 | -- | -- | -- | -- | -- |
| 48.02 | 0.324 | 12.6 | -- | 0.34 | -- | -- | -- | 0.332 | 12.5 | -- | -- | -- | -- |
| 47.8 | 0.322 | 12.6 | -- | -- | 0.409 | -- | -- | 0.291 | -- | 1.6 | 61 | -- | -- |
| 55.26 | 0.347 | 12.6 | -- | -- | -- | -- | -- | 0.328 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.97 | temperature | 20.0 | 10 | > th | dose independent | rect. | 24 | 6 |
| 6 | 29.57 | temperature | 20.0 | 270 | > th | dose independent | rect. | 24 | 3 |
| 9 | 29.87 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 24 | 6 |
| 20 | 30.25 | wind | 1.0 | 30 | > th | dose independent | rect. | 6 | 18 |
| 21 | 30.30 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 21 |
| 29 | 30.54 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 24 | 7 |
| 36 | 30.67 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 24 | 6 |
| 42 | 30.73 | humidity | 90.0 | 30 | > th | dose independent | rect. | 24 | 6 |
| 50 | 30.81 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 6 | 18 |
| 52 | 30.84 | humidity | 60.0 | 30 | > th | dose independent | rect. | 6 | 18 |
| 55 | 30.85 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 24 | 6 |
| 56 | 30.89 | wind | 3.0 | 90 | < th | dose dependent | rect. | 24 | 6 |
| 62 | 30.93 | wind | 9.0 | 30 | < th | dose dependent | rect. | 24 | 6 |
| 64 | 30.94 | wind | 9.0 | 30 | < th | dose independent | rect. | 24 | 6 |
| 69 | 30.95 | temperature | 30.0 | 10 | < th | dose independent | rect. | 24 | 6 |
| 70 | 30.95 | humidity | 50.0 | 10 | > th | dose independent | rect. | 24 | 6 |
| 73 | 30.95 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 24 | 6 |
| 76 | 30.95 | radiation | 20.0 | 10 | < th | dose independent | rect. | 24 | 6 |
| 79 | 30.95 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 18 |
| 95 | 30.98 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 1 | 6 |
| 98 | 30.98 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 1 | 6 |
| 102 | 30.98 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 1 | 6 |
| 107 | 30.98 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 1 | 6 |
| 108 | 30.98 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 1 | 6 |
| 112 | 30.98 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 18 |
| 116 | 30.98 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 18 |
| 120 | 30.98 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 18 |
| 127 | 31.03 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 24 | 6 |
| 136 | 31.08 | wind | 9.0 | 30 | < th | dose dependent | rect. | 15 | 15 |
| 137 | 31.09 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 1 | 2 |
| 140 | 31.10 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 3 |
| 141 | 31.11 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 24 | 6 |
| 142 | 31.11 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 24 | 6 |
| 156 | 31.19 | wind | 9.0 | 30 | < th | dose dependent | rect. | 13 | 17 |
| 177 | 31.30 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 24 | 3 |
| 195 | 31.33 | wind | 9.0 | 30 | < th | dose independent | rect. | 6 | 18 |
| 199 | 31.34 | temperature | 30.0 | 30 | < th | dose independent | rect. | 6 | 18 |
| 222 | 31.43 | wind | 1.0 | 270 | > th | dose independent | rect. | 18 | 15 |
| 246 | 31.48 | wind | 9.0 | 270 | < th | dose dependent | rect. | 11 | 17 |
| 252 | 31.51 | wind | 9.0 | 4320 | < th | dose independent | rect. | 2 | 5 |
| 271 | 31.53 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 21 |
| 272 | 31.53 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 21 |
| 274 | 31.54 | radiation | 40.0 | 270 | < th | dose independent | rect. | 4 | 7 |
| 293 | 31.60 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 3 |
| 295 | 31.60 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 3 |
| 296 | 31.60 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 3 |
| 299 | 31.60 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 3 |
| 300 | 31.60 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 24 | 3 |
| 302 | 31.60 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 3 |
| 307 | 31.60 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 21 |
| 308 | 31.60 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 24 | 3 |
| 316 | 31.61 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 3 |
| 317 | 31.61 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 3 |
| 322 | 31.61 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 3 |
| 344 | 31.63 | radiation | 40.0 | 30 | < th | dose independent | rect. | 6 | 18 |
| 362 | 31.67 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 6 | 18 |
| 406 | 31.71 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 18 |
| 421 | 31.73 | wind | 7.0 | 30 | < th | dose independent | rect. | 15 | 15 |
| 432 | 31.75 | wind | 9.0 | 270 | < th | dose dependent | rect. | 24 | 3 |
| 437 | 31.75 | wind | 9.0 | 270 | < th | dose dependent | rect. | 22 | 7 |
| 471 | 31.77 | wind | 3.0 | 30 | < th | dose independent | rect. | 24 | 6 |
| 479 | 31.78 | radiation | 30.0 | 270 | < th | dose independent | rect. | 18 | 15 |
| 516 | 31.81 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 10 |
| 517 | 31.81 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 19 |
| 523 | 31.81 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 11 | 19 |
| 543 | 31.82 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 19 |
| 553 | 31.82 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 19 |
| 559 | 31.84 | wind | 7.0 | 270 | < th | dose independent | rect. | 11 | 17 |
| 563 | 31.85 | radiation | 1.0 | 90 | < th | dose independent | sin | 5 | NA |
| 573 | 31.86 | radiation | 1.0 | 90 | > th | dose independent | sin | 6 | NA |
| 577 | 31.86 | radiation | 40.0 | 30 | < th | dose independent | rect. | 6 | 6 |
| 597 | 31.88 | humidity | 60.0 | 30 | > th | dose independent | rect. | 6 | 9 |
| 657 | 31.95 | wind | 3.0 | 90 | < th | dose dependent | rect. | 11 | 19 |
| 676 | 31.98 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 7 |
| 683 | 31.98 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 6 | 7 |
| 684 | 31.99 | humidity | 60.0 | 10 | > th | dose independent | rect. | 6 | 6 |
| 685 | 31.99 | wind | 9.0 | 270 | < th | dose independent | rect. | 22 | 7 |
| 687 | 31.99 | temperature | 30.0 | 270 | < th | dose independent | rect. | 22 | 7 |
| 688 | 31.99 | humidity | 50.0 | 270 | > th | dose independent | rect. | 22 | 7 |
| 691 | 31.99 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 22 | 7 |
| 698 | 31.99 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 22 | 7 |
| 704 | 32.00 | humidity | 60.0 | 270 | > th | dose independent | rect. | 4 | 7 |
| 712 | 32.01 | radiation | 30.0 | 270 | < th | dose independent | rect. | 5 | 4 |
| 714 | 32.01 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 21 |
| 721 | 32.02 | radiation | 10.0 | 30 | < th | dose dependent | sin | 5 | NA |
| 735 | 32.03 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 15 |
| 740 | 32.03 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 15 |
| 743 | 32.04 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 22 | 7 |
| 748 | 32.04 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 6 | 9 |
| 751 | 32.05 | wind | 1.0 | 270 | < th | dose independent | rect. | 9 | 20 |
| 761 | 32.06 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 6 |
| 774 | 32.08 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 12 | 18 |
| 803 | 32.11 | wind | 3.0 | 270 | < th | dose independent | rect. | 23 | 5 |
| 805 | 32.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 22 | 7 |
| 810 | 32.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 22 | 7 |
| 811 | 32.11 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 20 |
| 822 | 32.13 | temperature | 20.0 | 90 | > th | dose independent | rect. | 11 | 19 |
| 830 | 32.14 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 8 |
| 837 | 32.15 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 845 | 32.15 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 868 | 32.18 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 20 |
| 892 | 32.19 | temperature | 15.0 | 270 | > th | dose independent | rect. | 9 | 9 |
| 893 | 32.19 | wind | 5.0 | 30 | < th | dose independent | rect. | 13 | 17 |
| 904 | 32.20 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 7 |
| 905 | 32.20 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 9 |
| 906 | 32.20 | humidity | 90.0 | 30 | > th | dose independent | rect. | 24 | 10 |
| 914 | 32.20 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 9 |
| 917 | 32.20 | wind | 3.0 | 270 | < th | dose dependent | rect. | 9 | 20 |
| 948 | 32.22 | temperature | 15.0 | 10 | > th | dose independent | rect. | 12 | 18 |
| 980 | 32.24 | temperature | 15.0 | 270 | > th | dose independent | rect. | 9 | 20 |
| 999 | 32.26 | radiation | 20.0 | 270 | < th | dose independent | rect. | 4 | 20 |