Os04g0555600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Concanavalin A-like lectin/glucanase domain containing protein.
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Os04g0555600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Concanavalin A-like lectin/glucanase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 186.6 | 0.642 | 6.24 | 0.693 | 1.3 | 8.79 | -0.317 | -15.3 | 0.199 | 19.1 | 69.63 | 83 | 19.8 | 0.0671 |
| 186.26 | 0.636 | 6.23 | 0.762 | 1.3 | 7.38 | -0.304 | -- | 0.204 | 19.1 | 70.55 | 101 | 19.8 | 8.32 |
| 186.46 | 0.636 | 6.24 | 0.713 | 1.3 | 8.62 | -- | -13.9 | 0.2 | 19.1 | 70.97 | 80 | 19.8 | 0.154 |
| 186.39 | 0.636 | 6.23 | 0.778 | 1.3 | 7.31 | -- | -- | 0.198 | 19.1 | 70.66 | 103 | 19.8 | 10.8 |
| 274.65 | 0.772 | 6.21 | 0.68 | -- | 9.34 | -- | -13.2 | 0.178 | -- | 71.47 | 80 | 19.8 | 0.865 |
| 292.92 | 0.802 | 6.24 | 0.819 | 1.45 | -- | -0.0152 | -- | 0.161 | 19.2 | -- | -- | -- | -- |
| 292.92 | 0.801 | 6.24 | 0.819 | 1.45 | -- | -- | -- | 0.161 | 19.2 | -- | -- | -- | -- |
| 274.49 | 0.772 | 6.2 | 0.739 | -- | 8.02 | -- | -- | 0.169 | -- | 70.19 | 122 | 19.8 | 10.7 |
| 202.24 | 0.662 | 6.25 | -- | 1.29 | 7.5 | -- | -- | 0.114 | 19.1 | 71.58 | 74 | 19.8 | 10.4 |
| 404.16 | 0.939 | 6.21 | 0.792 | -- | -- | -- | -- | 0.135 | -- | -- | -- | -- | -- |
| 310.6 | 0.824 | 6.26 | -- | 1.44 | -- | -- | -- | 0.0695 | 19.2 | -- | -- | -- | -- |
| 289.15 | 0.792 | 6.2 | -- | -- | 8.13 | -- | -- | 0.121 | -- | 70.07 | 123 | 19.8 | 10.6 |
| 420.7 | 0.957 | 6.23 | -- | -- | -- | -- | -- | 0.0473 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 219.98 | humidity | 70.0 | 90 | < th | dose independent | rect. | 19 | 1 |
| 24 | 225.20 | humidity | 70.0 | 90 | < th | dose dependent | rect. | 19 | 1 |
| 75 | 237.57 | temperature | 30.0 | 90 | > th | dose independent | rect. | 18 | 1 |
| 89 | 237.88 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 19 | 1 |
| 118 | 243.60 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 119 | 244.10 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 120 | 244.77 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 121 | 244.87 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 123 | 245.11 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 126 | 246.19 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 129 | 246.49 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 139 | 247.30 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 144 | 247.86 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 16 | 5 |
| 182 | 249.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 185 | 249.87 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 186 | 249.87 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 188 | 249.91 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 202 | 250.62 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 220 | 251.25 | humidity | 50.0 | 270 | < th | dose independent | rect. | 17 | 1 |
| 236 | 251.25 | humidity | 50.0 | 270 | < th | dose dependent | rect. | 17 | 1 |
| 255 | 251.43 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 258 | 251.43 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 3 |
| 262 | 251.58 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 263 | 251.58 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 264 | 251.66 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 265 | 251.66 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 271 | 251.89 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 276 | 251.95 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 277 | 251.95 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 279 | 252.00 | wind | 9.0 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 281 | 252.03 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 282 | 252.03 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 13 |
| 283 | 252.07 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 314 | 252.49 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 6 |
| 315 | 252.49 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 6 |
| 319 | 252.62 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 331 | 252.76 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 333 | 252.76 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 336 | 252.82 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 3 |
| 356 | 252.98 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 11 |
| 357 | 252.98 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 11 |
| 361 | 253.01 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 3 |
| 367 | 253.08 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 375 | 253.16 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 11 |
| 380 | 253.22 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 400 | 253.27 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 6 |
| 409 | 253.38 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 6 |
| 425 | 253.53 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 428 | 253.56 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 450 | 253.72 | radiation | 40.0 | 720 | > th | dose independent | rect. | 13 | 21 |
| 468 | 253.86 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 480 | 253.94 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 1 | 19 |
| 481 | 253.94 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 1 | 19 |
| 483 | 253.96 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 10 |
| 490 | 254.02 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 1 | 19 |
| 528 | 254.24 | wind | 7.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 545 | 254.35 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 10 |
| 576 | 254.60 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 4 | NA |
| 577 | 254.60 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 4 | NA |
| 579 | 254.60 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 4 | NA |
| 582 | 254.62 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 2 | NA |
| 583 | 254.62 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 2 | NA |
| 584 | 254.63 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 2 | NA |
| 594 | 254.71 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 615 | 254.80 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 11 |
| 616 | 254.82 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 627 | 254.89 | wind | 9.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 637 | 254.94 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 10 |
| 639 | 254.94 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 10 |
| 640 | 254.97 | radiation | 40.0 | 720 | > th | dose independent | rect. | 13 | 23 |
| 644 | 255.00 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 670 | 255.22 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 671 | 255.23 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 672 | 255.24 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 13 |
| 681 | 255.29 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 691 | 255.34 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 764 | 255.74 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 3 | NA |
| 800 | 256.14 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 8 |
| 803 | 256.15 | radiation | 40.0 | 720 | > th | dose dependent | rect. | 13 | 23 |
| 811 | 256.20 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 5 | NA |
| 815 | 256.24 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 14 |
| 825 | 256.29 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 827 | 256.31 | radiation | 40.0 | 720 | < th | dose independent | rect. | 13 | 1 |
| 847 | 256.41 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 864 | 256.50 | radiation | 40.0 | 720 | < th | dose independent | rect. | 4 | 20 |
| 865 | 256.52 | humidity | 70.0 | 270 | < th | dose independent | sin | 12 | NA |
| 907 | 256.69 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 3 |
| 909 | 256.71 | radiation | 40.0 | 720 | < th | dose independent | rect. | 11 | 5 |
| 925 | 256.81 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 5 |
| 927 | 256.82 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 10 |
| 928 | 256.82 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 10 |
| 955 | 256.95 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 962 | 256.96 | radiation | 30.0 | 720 | > th | dose dependent | rect. | 13 | 21 |
| 974 | 257.00 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 16 | 4 |
| 993 | 257.12 | radiation | 40.0 | 720 | > th | dose independent | sin | 12 | NA |