Os04g0545700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os04g0545700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 139.6 | 0.555 | 2.87 | 0.096 | 0.0559 | -5.08 | -0.302 | 18.8 | -0.0684 | 7.86 | 0.1227 | 35 | -- | -- |
| 143.49 | 0.562 | 2.91 | 0.0121 | 0.00501 | -0.199 | -0.408 | -- | -0.0587 | 10.3 | 0.1227 | 35 | -- | -- |
| 139.81 | 0.551 | 2.87 | 0.0867 | 0.0656 | -5.12 | -- | 19.1 | -0.0686 | 6.13 | 0.2274 | 34 | -- | -- |
| 143.25 | 0.557 | 2.91 | -0.0323 | 0.0236 | 0.581 | -- | -- | -0.0554 | 9.92 | 0.4995 | 22 | -- | -- |
| 140.03 | 0.551 | 2.87 | 0.0869 | -- | -5.02 | -- | 18.7 | -0.067 | -- | 0.2097 | 34 | -- | -- |
| 143.54 | 0.562 | 2.91 | 0.00845 | 0.00647 | -- | -0.404 | -- | -0.0583 | 10.2 | -- | -- | -- | -- |
| 144.13 | 0.562 | 2.91 | -0.00881 | 0.0347 | -- | -- | -- | -0.0601 | 5.44 | -- | -- | -- | -- |
| 143.28 | 0.558 | 2.91 | -0.0319 | -- | 0.57 | -- | -- | -0.0551 | -- | 0.4946 | 22 | -- | -- |
| 143.26 | 0.557 | 2.92 | -- | 0.0242 | 0.566 | -- | -- | -0.0538 | 7.98 | 0.225 | 22 | -- | -- |
| 144.2 | 0.561 | 2.91 | -0.00765 | -- | -- | -- | -- | -0.0593 | -- | -- | -- | -- | -- |
| 144.14 | 0.562 | 2.91 | -- | 0.0345 | -- | -- | -- | -0.0591 | 5.45 | -- | -- | -- | -- |
| 143.31 | 0.558 | 2.91 | -- | -- | 0.558 | -- | -- | -0.0515 | -- | 0.1808 | 22 | -- | -- |
| 144.2 | 0.56 | 2.91 | -- | -- | -- | -- | -- | -0.0584 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 132.31 | humidity | 50.0 | 30 | < th | dose independent | rect. | 13 | 3 |
| 3 | 132.33 | humidity | 50.0 | 30 | < th | dose independent | rect. | 15 | 1 |
| 23 | 132.37 | humidity | 50.0 | 30 | < th | dose dependent | rect. | 13 | 3 |
| 24 | 132.40 | humidity | 50.0 | 30 | < th | dose dependent | rect. | 15 | 1 |
| 166 | 134.43 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 172 | 135.01 | wind | 7.0 | 90 | > th | dose independent | rect. | 21 | 1 |
| 174 | 135.04 | wind | 7.0 | 90 | > th | dose dependent | rect. | 21 | 1 |
| 202 | 135.16 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 21 | 1 |
| 204 | 135.16 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 21 | 1 |
| 233 | 135.41 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 21 | 1 |
| 244 | 135.41 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 21 | 1 |
| 256 | 135.57 | humidity | 50.0 | 10 | < th | dose independent | sin | 6 | NA |
| 262 | 135.78 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 2 | 1 |
| 263 | 135.78 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 315 | 136.34 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 20 | 7 |
| 316 | 136.34 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 20 | 7 |
| 357 | 137.11 | temperature | 20.0 | 30 | > th | dose independent | rect. | 3 | 1 |
| 452 | 137.90 | precipitation | 0.1 | 90 | < th | dose independent | sin | 14 | NA |
| 453 | 137.90 | precipitation | 0.1 | 90 | < th | dose dependent | sin | 14 | NA |
| 456 | 137.94 | precipitation | 0.1 | 90 | > th | dose independent | sin | 14 | NA |
| 457 | 137.94 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 3 | 1 |
| 472 | 138.08 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 20 | 12 |
| 481 | 138.12 | wind | 5.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 486 | 138.17 | radiation | 30.0 | 90 | > th | dose independent | rect. | 15 | 1 |
| 502 | 138.18 | temperature | 30.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 511 | 138.20 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 15 | 7 |
| 670 | 138.45 | wind | 7.0 | 30 | > th | dose dependent | sin | 11 | NA |
| 724 | 138.63 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 15 | 12 |
| 725 | 138.63 | precipitation | 0.1 | 30 | > th | dose dependent | sin | 15 | NA |
| 745 | 138.67 | radiation | 20.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 777 | 138.67 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 15 | 16 |
| 781 | 138.68 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 20 | 12 |
| 835 | 138.74 | humidity | 50.0 | 10 | < th | dose dependent | sin | 6 | NA |
| 897 | 138.82 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 2 |
| 899 | 138.82 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 2 |
| 998 | 139.05 | wind | 1.0 | 270 | < th | dose independent | rect. | 24 | 1 |