Os04g0537100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Auxin-induced protein X15.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0537100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Auxin-induced protein X15.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 88.91 | 0.443 | 11.8 | 0.0602 | 2.9 | -0.551 | 0.409 | 0.791 | -0.348 | 9.03 | 20.2 | 10 | -- | -- |
| 91.72 | 0.449 | 11.8 | -0.0973 | 2.9 | -0.59 | 0.674 | -- | -0.376 | 9.06 | 20.6 | 10 | -- | -- |
| 88.52 | 0.442 | 11.8 | 0.0872 | 2.91 | -0.639 | -- | 0.859 | -0.362 | 9.03 | 19.3 | 10 | -- | -- |
| 90.92 | 0.444 | 11.8 | -0.000713 | 2.91 | -0.769 | -- | -- | -0.382 | 9.05 | 19.1 | 12 | -- | -- |
| 556.77 | 1.1 | 11.9 | -0.1 | -- | 0.284 | -- | 0.746 | -0.503 | -- | 22.2 | 25 | -- | -- |
| 106.8 | 0.484 | 11.8 | -0.244 | 2.83 | -- | 0.623 | -- | -0.491 | 8.9 | -- | -- | -- | -- |
| 108.1 | 0.487 | 11.8 | -0.223 | 2.83 | -- | -- | -- | -0.491 | 8.87 | -- | -- | -- | -- |
| 515.18 | 1.06 | 11.8 | 0.181 | -- | -1.08 | -- | -- | -0.124 | -- | 21.8 | 755 | -- | -- |
| 90.92 | 0.444 | 11.8 | -- | 2.91 | -0.77 | -- | -- | -0.382 | 9.04 | 19.05 | 12 | -- | -- |
| 565.52 | 1.11 | 11.9 | -0.223 | -- | -- | -- | -- | -0.471 | -- | -- | -- | -- | -- |
| 109.42 | 0.489 | 11.8 | -- | 2.83 | -- | -- | -- | -0.466 | 8.88 | -- | -- | -- | -- |
| 367.91 | 0.893 | 11.8 | -- | -- | -2.01 | -- | -- | -0.101 | -- | 26.2 | 638 | -- | -- |
| 566.83 | 1.11 | 11.9 | -- | -- | -- | -- | -- | -0.446 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 77.57 | temperature | 20 | 10 | < th | dose independent | sin | 12 | NA |
| 3 | 77.93 | temperature | 20 | 10 | < th | dose independent | rect. | 18 | 10 |
| 24 | 79.45 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 12 |
| 36 | 79.78 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 8 |
| 90 | 81.05 | temperature | 30 | 90 | < th | dose dependent | sin | 13 | NA |
| 102 | 81.35 | temperature | 30 | 270 | < th | dose dependent | sin | 15 | NA |
| 113 | 81.50 | temperature | 30 | 10 | < th | dose dependent | sin | 12 | NA |
| 131 | 81.68 | temperature | 20 | 270 | < th | dose independent | rect. | 23 | 1 |
| 162 | 82.00 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 11 |
| 168 | 82.07 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 11 |
| 238 | 82.85 | temperature | 20 | 10 | > th | dose independent | sin | 15 | NA |
| 250 | 82.97 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 12 |
| 333 | 83.62 | temperature | 20 | 10 | > th | dose independent | rect. | 16 | 12 |
| 405 | 84.14 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 12 |
| 410 | 84.15 | temperature | 25 | 10 | < th | dose dependent | rect. | 18 | 10 |
| 500 | 84.72 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 10 |
| 687 | 85.84 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 10 |
| 701 | 85.94 | temperature | 10 | 270 | > th | dose dependent | sin | 17 | NA |
| 711 | 86.04 | temperature | 10 | 90 | > th | dose dependent | sin | 12 | NA |
| 715 | 86.08 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 10 |
| 729 | 86.17 | temperature | 10 | 10 | > th | dose dependent | sin | 11 | NA |
| 777 | 86.49 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 16 |
| 866 | 86.91 | temperature | 20 | 10 | > th | dose independent | rect. | 7 | 23 |
| 965 | 87.59 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 12 |
| 981 | 87.68 | temperature | 10 | 10 | > th | dose dependent | sin | 15 | NA |