Os04g0534300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ubiquitin interacting motif domain containing protein.
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Os04g0534300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ubiquitin interacting motif domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.1 | 0.2 | 10.5 | -0.547 | 0.489 | 0.282 | 0.0182 | -0.437 | -0.211 | 5.04 | 20.11 | 585 | -- | -- |
| 18.62 | 0.201 | 10.5 | -0.61 | 0.491 | 0.333 | -0.117 | -- | -0.225 | 5.02 | 20.23 | 603 | -- | -- |
| 18.06 | 0.198 | 10.5 | -0.547 | 0.489 | 0.28 | -- | -0.438 | -0.21 | 5.03 | 20.2 | 581 | -- | -- |
| 18.54 | 0.201 | 10.5 | -0.612 | 0.485 | 0.347 | -- | -- | -0.227 | 4.96 | 19.9 | 614 | -- | -- |
| 29.9 | 0.255 | 10.5 | -0.521 | -- | 0.341 | -- | -0.43 | -0.186 | -- | 20.6 | 374 | -- | -- |
| 21.64 | 0.218 | 10.6 | -0.736 | 0.511 | -- | -0.0156 | -- | -0.293 | 5.26 | -- | -- | -- | -- |
| 21.64 | 0.218 | 10.6 | -0.736 | 0.511 | -- | -- | -- | -0.293 | 5.26 | -- | -- | -- | -- |
| 30.36 | 0.257 | 10.5 | -0.583 | -- | 0.402 | -- | -- | -0.197 | -- | 20.2 | 414 | -- | -- |
| 19.81 | 0.207 | 10.5 | -- | 0.515 | 0.675 | -- | -- | -0.0673 | 5.2 | 17.6 | 47520 | -- | -- |
| 35.26 | 0.277 | 10.6 | -0.718 | -- | -- | -- | -- | -0.28 | -- | -- | -- | -- | -- |
| 35.92 | 0.28 | 10.5 | -- | 0.498 | -- | -- | -- | -0.211 | 5.32 | -- | -- | -- | -- |
| 33.7 | 0.27 | 10.5 | -- | -- | 0.654 | -- | -- | -0.0611 | -- | 17.63 | 47520 | -- | -- |
| 48.88 | 0.326 | 10.5 | -- | -- | -- | -- | -- | -0.2 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 15.80 | temperature | 20.0 | 270 | > th | dose independent | rect. | 2 | 16 |
| 18 | 17.00 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 24 | 7 |
| 22 | 17.06 | temperature | 20.0 | 270 | > th | dose independent | rect. | 12 | 19 |
| 25 | 17.11 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 29 | 17.15 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 62 | 17.40 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 16 |
| 92 | 17.60 | temperature | 20.0 | 270 | > th | dose independent | rect. | 12 | 7 |
| 110 | 17.69 | wind | 5.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 111 | 17.69 | temperature | 20.0 | 720 | > th | dose independent | rect. | 20 | 17 |
| 130 | 17.74 | temperature | 20.0 | 30 | > th | dose independent | rect. | 12 | 21 |
| 163 | 17.81 | wind | 9.0 | 270 | < th | dose dependent | rect. | 17 | 8 |
| 195 | 17.89 | temperature | 20.0 | 720 | > th | dose independent | sin | 8 | NA |
| 210 | 17.92 | wind | 5.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 254 | 18.00 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 265 | 18.02 | temperature | 20.0 | 30 | > th | dose independent | rect. | 12 | 23 |
| 269 | 18.03 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 273 | 18.04 | humidity | 90.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 307 | 18.09 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 308 | 18.09 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 309 | 18.09 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 312 | 18.09 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 331 | 18.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 7 |
| 339 | 18.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 344 | 18.12 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 7 |
| 346 | 18.12 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 12 | 7 |
| 350 | 18.12 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 17 |
| 351 | 18.12 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 17 |
| 359 | 18.13 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 9 |
| 363 | 18.13 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 365 | 18.14 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 368 | 18.14 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 379 | 18.15 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 17 |
| 392 | 18.16 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 393 | 18.16 | radiation | 20.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 406 | 18.16 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 407 | 18.16 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 17 | 13 |
| 424 | 18.17 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 19 |
| 428 | 18.18 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 17 |
| 429 | 18.18 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 17 |
| 437 | 18.18 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 17 |
| 438 | 18.19 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 24 | 7 |
| 451 | 18.20 | radiation | 20.0 | 270 | < th | dose independent | rect. | 24 | 7 |
| 464 | 18.21 | temperature | 20.0 | 720 | < th | dose independent | rect. | 21 | 19 |
| 478 | 18.22 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 7 |
| 485 | 18.22 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 486 | 18.22 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 491 | 18.22 | temperature | 20.0 | 720 | < th | dose independent | rect. | 18 | 18 |
| 501 | 18.23 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 7 |
| 502 | 18.23 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 504 | 18.23 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 15 |
| 505 | 18.23 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 511 | 18.23 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 524 | 18.23 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 15 |
| 526 | 18.23 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 537 | 18.24 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 9 | 8 |
| 540 | 18.25 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 7 |
| 542 | 18.25 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 17 |
| 553 | 18.25 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 10 | 1 |
| 554 | 18.25 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 11 | 4 |
| 556 | 18.25 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 10 | 6 |
| 558 | 18.25 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 7 |
| 561 | 18.25 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 17 |
| 565 | 18.26 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 7 |
| 567 | 18.26 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 7 |
| 569 | 18.26 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 7 |
| 570 | 18.26 | humidity | 50.0 | 270 | > th | dose independent | rect. | 18 | 7 |
| 571 | 18.26 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 7 |
| 573 | 18.26 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 7 |
| 576 | 18.26 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 584 | 18.26 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 17 |
| 624 | 18.27 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 632 | 18.28 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 633 | 18.28 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 7 |
| 653 | 18.28 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 7 |
| 680 | 18.29 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 17 |
| 694 | 18.29 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 17 |
| 712 | 18.30 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 721 | 18.30 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 21 |
| 722 | 18.31 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 12 | 6 |
| 732 | 18.31 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 17 |
| 755 | 18.32 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 770 | 18.32 | temperature | 20.0 | 720 | < th | dose independent | rect. | 7 | 23 |
| 800 | 18.33 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 15 |
| 804 | 18.33 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 835 | 18.34 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 14 | 9 |
| 839 | 18.34 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 17 |
| 843 | 18.35 | humidity | 90.0 | 270 | < th | dose independent | rect. | 12 | 7 |
| 894 | 18.37 | temperature | 20.0 | 720 | < th | dose independent | no | NA | NA |
| 896 | 18.37 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 7 |
| 897 | 18.37 | temperature | 20.0 | 30 | > th | dose independent | rect. | 12 | 8 |
| 902 | 18.37 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 12 | 19 |
| 910 | 18.38 | temperature | 20.0 | 720 | > th | dose independent | no | NA | NA |
| 916 | 18.38 | radiation | 1.0 | 270 | > th | dose independent | rect. | 4 | 9 |
| 920 | 18.38 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 11 | 13 |
| 939 | 18.39 | wind | 1.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 947 | 18.39 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 12 | 11 |
| 956 | 18.39 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 4 |
| 965 | 18.40 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 19 | NA |
| 981 | 18.40 | temperature | 20.0 | 720 | < th | dose independent | rect. | 11 | 23 |
| 983 | 18.40 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 989 | 18.41 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 19 | NA |