Os04g0527500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os04g0527500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 97.32 | 0.464 | 8.07 | -0.347 | 0.828 | -0.881 | -0.25 | -0.0981 | -0.0759 | 14.3 | 83 | 1193 | -- | -- |
| 97.29 | 0.459 | 8.07 | -0.345 | 0.825 | -0.895 | -0.214 | -- | -0.0699 | 14.3 | 84 | 1183 | -- | -- |
| 97.47 | 0.46 | 8.07 | -0.35 | 0.822 | -0.897 | -- | 0.0284 | -0.0712 | 14.3 | 84 | 1179 | -- | -- |
| 97.48 | 0.46 | 8.07 | -0.353 | 0.821 | -0.896 | -- | -- | -0.072 | 14.3 | 84 | 1179 | -- | -- |
| 130.54 | 0.535 | 8.06 | -0.541 | -- | 1.26 | -- | -0.0334 | -0.0352 | -- | 86.41 | 1141 | -- | -- |
| 114.06 | 0.501 | 8.06 | -0.474 | 0.999 | -- | -0.114 | -- | -0.0538 | 14 | -- | -- | -- | -- |
| 114.11 | 0.5 | 8.06 | -0.477 | 0.999 | -- | -- | -- | -0.0545 | 14 | -- | -- | -- | -- |
| 130.54 | 0.534 | 8.06 | -0.54 | -- | 1.26 | -- | -- | -0.0352 | -- | 86.41 | 1141 | -- | -- |
| 100.55 | 0.467 | 8.07 | -- | 0.82 | -0.952 | -- | -- | -0.047 | 14.4 | 82 | 1179 | -- | -- |
| 174.17 | 0.617 | 8.07 | -0.519 | -- | -- | -- | -- | -0.0779 | -- | -- | -- | -- | -- |
| 120.11 | 0.513 | 8.05 | -- | 1.01 | -- | -- | -- | -0.00136 | 14 | -- | -- | -- | -- |
| 134.8 | 0.541 | 8.07 | -- | -- | -1.4 | -- | -- | -0.0495 | -- | 85.28 | 1132 | -- | -- |
| 181.26 | 0.628 | 8.06 | -- | -- | -- | -- | -- | -0.0203 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 85.11 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 2 | 85.49 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 6 | 21 |
| 3 | 85.85 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 4 | 85.86 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 6 | 86.12 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 20 |
| 7 | 86.37 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 22 |
| 27 | 88.43 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 39 | 89.31 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 13 |
| 50 | 89.57 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 9 |
| 60 | 89.81 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 19 | 4 |
| 61 | 89.82 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 77 | 89.98 | wind | 5.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 83 | 90.15 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 90 | 90.51 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 5 |
| 91 | 90.51 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 92 | 90.51 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 97 | 90.60 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 102 | 90.64 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 106 | 90.75 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 107 | 90.76 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 2 |
| 110 | 90.80 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 119 | 90.94 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 120 | 90.94 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 123 | 90.96 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 124 | 90.99 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 127 | 91.08 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 143 | 91.32 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 145 | 91.40 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 148 | 91.45 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 151 | 91.45 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 154 | 91.45 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 155 | 91.45 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 156 | 91.45 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 159 | 91.45 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 165 | 91.48 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 6 |
| 180 | 91.53 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 18 |
| 182 | 91.55 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 184 | 91.56 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 190 | 91.57 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 16 |
| 195 | 91.61 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 197 | 91.64 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 198 | 91.64 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 199 | 91.64 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 201 | 91.64 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 202 | 91.64 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 207 | 91.64 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 208 | 91.64 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 209 | 91.64 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 215 | 91.66 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 220 | 91.70 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 226 | 91.73 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 228 | 91.74 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 16 |
| 230 | 91.74 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 231 | 91.75 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 243 | 91.88 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 247 | 91.93 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 252 | 91.95 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 18 |
| 253 | 91.95 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 18 |
| 259 | 91.97 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 4 | 16 |
| 267 | 92.01 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 285 | 92.16 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 19 |
| 287 | 92.16 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 307 | 92.20 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 316 | 92.25 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 8 |
| 317 | 92.25 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 318 | 92.26 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 327 | 92.30 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 330 | 92.32 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 354 | 92.44 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 1 |
| 355 | 92.44 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 11 |
| 357 | 92.44 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 380 | 92.49 | radiation | 10.0 | 10 | < th | dose independent | rect. | 4 | 17 |
| 410 | 92.63 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 6 |
| 411 | 92.63 | humidity | 60.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 412 | 92.63 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 19 | 6 |
| 414 | 92.64 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 415 | 92.64 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 6 |
| 417 | 92.64 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 418 | 92.64 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 6 |
| 424 | 92.64 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 16 |
| 426 | 92.64 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 427 | 92.64 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 428 | 92.64 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 429 | 92.64 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 19 | 6 |
| 434 | 92.64 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 447 | 92.68 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 21 | 6 |
| 464 | 92.74 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 471 | 92.77 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 483 | 92.89 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 487 | 92.91 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 9 |
| 510 | 92.97 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 3 | 18 |
| 514 | 92.99 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 541 | 93.08 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 11 |
| 547 | 93.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 15 |
| 549 | 93.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 15 |
| 550 | 93.12 | wind | 9.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 552 | 93.14 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 556 | 93.15 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 600 | 93.34 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 619 | 93.36 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 4 |
| 622 | 93.36 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 4 |
| 650 | 93.45 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 653 | 93.46 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 666 | 93.52 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 667 | 93.53 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 6 |
| 669 | 93.53 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 6 |
| 672 | 93.54 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 6 | 10 |
| 703 | 93.65 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 9 |
| 704 | 93.65 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 9 |
| 705 | 93.66 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 706 | 93.66 | radiation | 10.0 | 90 | < th | dose dependent | sin | 1 | NA |
| 776 | 93.81 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 802 | 93.86 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 803 | 93.86 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 804 | 93.86 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 805 | 93.86 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 808 | 93.87 | humidity | 80.0 | 720 | < th | dose independent | rect. | 19 | 3 |
| 826 | 93.91 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 837 | 93.94 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 863 | 94.02 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 871 | 94.05 | temperature | 25.0 | 90 | < th | dose independent | sin | 6 | NA |
| 937 | 94.12 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 960 | 94.16 | humidity | 60.0 | 720 | < th | dose independent | rect. | 18 | 2 |
| 979 | 94.16 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 981 | 94.16 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 20 |