Os04g0515300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ribosomal protein L14 domain containing protein.
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Os04g0515300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ribosomal protein L14 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.69 | 0.318 | 13.8 | 0.242 | 0.605 | 0.658 | 0.356 | -1 | -0.0194 | 18.6 | 20.5 | 4157 | -- | -- |
| 47.03 | 0.319 | 13.7 | 0.421 | 0.604 | 0.825 | 0.353 | -- | 0.0308 | 18.6 | 20.2 | 4141 | -- | -- |
| 46 | 0.316 | 13.8 | 0.23 | 0.607 | 0.657 | -- | -1.03 | -0.0199 | 18.6 | 20.6 | 4158 | -- | -- |
| 47.37 | 0.321 | 13.7 | 0.404 | 0.609 | 0.853 | -- | -- | 0.0244 | 18.5 | 20.23 | 4129 | -- | -- |
| 64.5 | 0.374 | 13.8 | 0.247 | -- | 0.627 | -- | -1 | -0.0372 | -- | 21.1 | 3600 | -- | -- |
| 60.26 | 0.364 | 13.7 | 0.929 | 0.588 | -- | 0.477 | -- | 0.263 | 18.8 | -- | -- | -- | -- |
| 60.83 | 0.365 | 13.7 | 0.922 | 0.59 | -- | -- | -- | 0.265 | 18.7 | -- | -- | -- | -- |
| 65.59 | 0.377 | 13.7 | 0.425 | -- | 0.813 | -- | -- | 0.0245 | -- | 20.49 | 3481 | -- | -- |
| 47.02 | 0.319 | 13.8 | -- | 0.593 | 1.01 | -- | -- | -0.0544 | 18.7 | 19 | 21699 | -- | -- |
| 79.02 | 0.415 | 13.7 | 0.908 | -- | -- | -- | -- | 0.253 | -- | -- | -- | -- | -- |
| 83.23 | 0.427 | 13.7 | -- | 0.579 | -- | -- | -- | 0.162 | 18.8 | -- | -- | -- | -- |
| 65.19 | 0.376 | 13.7 | -- | -- | 1.01 | -- | -- | -0.0639 | -- | 18.92 | 21032 | -- | -- |
| 100.78 | 0.469 | 13.7 | -- | -- | -- | -- | -- | 0.152 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.77 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 2 | 44.72 | temperature | 20 | 4320 | < th | dose independent | rect. | 16 | 10 |
| 3 | 44.75 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 10 |
| 19 | 44.93 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 40 | 45.07 | temperature | 20 | 4320 | < th | dose independent | sin | 15 | NA |
| 44 | 45.08 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |
| 67 | 45.19 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 201 | 45.76 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 202 | 45.76 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 294 | 46.01 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 308 | 46.05 | temperature | 20 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 321 | 46.07 | temperature | 20 | 4320 | > th | dose independent | no | NA | NA |
| 324 | 46.08 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 330 | 46.09 | temperature | 20 | 4320 | < th | dose independent | no | NA | NA |
| 332 | 46.09 | temperature | 20 | 4320 | > th | dose independent | rect. | 4 | 23 |
| 344 | 46.11 | temperature | 20 | 4320 | < th | dose independent | rect. | 5 | 23 |
| 345 | 46.12 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 2 |
| 354 | 46.13 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 23 |
| 355 | 46.13 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 23 |
| 368 | 46.15 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 23 |
| 369 | 46.15 | temperature | 20 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 379 | 46.16 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 23 |
| 388 | 46.17 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 23 |
| 426 | 46.24 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 6 |
| 430 | 46.25 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 2 |
| 460 | 46.28 | humidity | 50 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 461 | 46.28 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 21 |
| 483 | 46.33 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 488 | 46.33 | temperature | 25 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 513 | 46.37 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 522 | 46.38 | temperature | 15 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 534 | 46.40 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 588 | 46.48 | humidity | 90 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 715 | 46.64 | humidity | 90 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 764 | 46.69 | temperature | 15 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 785 | 46.71 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 815 | 46.74 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 19 |
| 855 | 46.80 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 862 | 46.80 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 892 | 46.83 | humidity | 50 | 43200 | < th | dose dependent | rect. | 3 | 7 |
| 954 | 46.88 | radiation | 10 | 4320 | > th | dose dependent | rect. | 17 | 1 |