Os04g0507800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UbiE/COQ5 methyltransferase family protein.
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Os04g0507800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UbiE/COQ5 methyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 59.82 | 0.363 | 11.1 | -2.05 | 0.807 | 1.14 | 0.181 | 4.49 | -0.97 | 0.0562 | 0.71 | 1441 | -- | -- |
| 66.72 | 0.38 | 11.2 | -2.41 | 0.82 | 0.549 | 0.432 | -- | -1.07 | 23.6 | 11.38 | 11733 | -- | -- |
| 59.95 | 0.361 | 11.1 | -2.05 | 0.797 | 1.14 | -- | 4.47 | -0.971 | 0.0552 | 0.7089 | 1437 | -- | -- |
| 66.11 | 0.379 | 11.2 | -2.32 | 0.871 | 0.558 | -- | -- | -1.2 | 0.546 | 21.18 | 9083 | -- | -- |
| 85.72 | 0.431 | 11.1 | -2.03 | -- | 1.44 | -- | 4.16 | -1.02 | -- | 0.4516 | 2713 | -- | -- |
| 75.99 | 0.409 | 11.2 | -2.46 | 0.831 | -- | 0.236 | -- | -0.993 | 0.167 | -- | -- | -- | -- |
| 76.23 | 0.409 | 11.2 | -2.47 | 0.83 | -- | -- | -- | -0.994 | 0.158 | -- | -- | -- | -- |
| 85.2 | 0.432 | 11.2 | -2.47 | -- | -0.557 | -- | -- | -0.932 | -- | 4.144 | 6907 | -- | -- |
| 168.15 | 0.604 | 11.2 | -- | 0.549 | 1.3 | -- | -- | -1 | 0.893 | 49.81 | 24373 | -- | -- |
| 119.6 | 0.511 | 11.2 | -2.45 | -- | -- | -- | -- | -0.981 | -- | -- | -- | -- | -- |
| 237.35 | 0.721 | 11.1 | -- | 0.797 | -- | -- | -- | -0.718 | 24 | -- | -- | -- | -- |
| 196.93 | 0.654 | 11.2 | -- | -- | 1.71 | -- | -- | -0.884 | -- | 49.83 | 25612 | -- | -- |
| 277.39 | 0.777 | 11.1 | -- | -- | -- | -- | -- | -0.71 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.86 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 4 |
| 13 | 56.78 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 14 | 56.78 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 17 | 56.83 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 42 | 57.93 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 48 | 58.04 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 7 |
| 66 | 58.32 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 15 |
| 77 | 58.37 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 12 |
| 84 | 58.39 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 15 |
| 85 | 58.39 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 17 | 12 |
| 91 | 58.44 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 94 | 58.46 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 98 | 58.49 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 12 |
| 114 | 58.59 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 13 |
| 132 | 58.68 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 13 |
| 152 | 58.83 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 167 | 58.90 | humidity | 80.0 | 14400 | < th | dose independent | sin | 15 | NA |
| 168 | 58.90 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 216 | 59.10 | humidity | 80.0 | 14400 | > th | dose independent | sin | 15 | NA |
| 224 | 59.13 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 14 | 21 |
| 246 | 59.22 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 262 | 59.28 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 302 | 59.38 | humidity | 80.0 | 14400 | < th | dose dependent | sin | 13 | NA |
| 310 | 59.41 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 316 | 59.44 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 16 | 17 |
| 325 | 59.46 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 19 |
| 330 | 59.47 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 2 |
| 338 | 59.49 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 21 | NA |
| 351 | 59.53 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 18 |
| 352 | 59.53 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 18 | 4 |
| 358 | 59.55 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 18 | 4 |
| 411 | 59.64 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 441 | 59.70 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 12 | 7 |
| 442 | 59.70 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 457 | 59.72 | radiation | 30.0 | 1440 | > th | dose independent | rect. | 15 | 20 |
| 510 | 59.76 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 17 | 15 |
| 519 | 59.77 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 15 | 20 |
| 520 | 59.77 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 571 | 59.88 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 576 | 59.89 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 17 | 19 |
| 587 | 59.92 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 8 |
| 590 | 59.92 | radiation | 20.0 | 1440 | > th | dose dependent | rect. | 9 | 2 |
| 597 | 59.94 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 12 | 8 |
| 615 | 59.96 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 9 |
| 635 | 60.00 | radiation | 1.0 | 1440 | > th | dose independent | sin | 12 | NA |
| 636 | 60.00 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 709 | 60.08 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 15 | 17 |
| 751 | 60.13 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 17 | 15 |
| 823 | 60.21 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 8 |
| 826 | 60.22 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 4 |
| 832 | 60.22 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 834 | 60.23 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 859 | 60.25 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 17 | 19 |
| 860 | 60.25 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 20 |
| 892 | 60.29 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 12 | NA |
| 903 | 60.31 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 20 |
| 914 | 60.33 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 9 | 10 |
| 938 | 60.35 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 8 | 23 |
| 974 | 60.37 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 9 | 16 |