Os04g0505000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF869, plant family protein.
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Os04g0505000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF869, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.48 | 0.429 | 8.24 | -1.63 | 0.714 | -0.427 | -0.389 | -1.04 | -0.244 | 11.6 | 1011 | 10001 | -- | -- |
| 87.32 | 0.435 | 8.27 | -1.91 | 0.731 | -0.36 | -0.203 | -- | -0.301 | 11.4 | 1011 | 12102 | -- | -- |
| 84.04 | 0.427 | 8.24 | -1.65 | 0.713 | -0.451 | -- | -1.05 | -0.247 | 11.5 | 1012 | 9844 | -- | -- |
| 87.51 | 0.436 | 8.28 | -2.02 | 0.713 | -0.396 | -- | -- | -0.334 | 11.4 | 1012 | 12110 | -- | -- |
| 116.16 | 0.502 | 8.26 | -1.69 | -- | -0.407 | -- | -0.935 | -0.257 | -- | 1012 | 11210 | -- | -- |
| 93.81 | 0.454 | 8.26 | -1.8 | 0.705 | -- | -0.395 | -- | -0.214 | 11.5 | -- | -- | -- | -- |
| 94.47 | 0.455 | 8.26 | -1.82 | 0.707 | -- | -- | -- | -0.216 | 11.4 | -- | -- | -- | -- |
| 119.26 | 0.509 | 8.3 | -2.02 | -- | -0.39 | -- | -- | -0.34 | -- | 1012 | 11744 | -- | -- |
| 145.73 | 0.562 | 8.18 | -- | 0.713 | 1.02 | -- | -- | 0.133 | 13.1 | 1015 | 47520 | -- | -- |
| 125.82 | 0.524 | 8.27 | -1.83 | -- | -- | -- | -- | -0.223 | -- | -- | -- | -- | -- |
| 181.43 | 0.63 | 8.21 | -- | 0.727 | -- | -- | -- | -0.0135 | 11.6 | -- | -- | -- | -- |
| 172.2 | 0.611 | 8.18 | -- | -- | 1.14 | -- | -- | 0.192 | -- | 1015 | 47520 | -- | -- |
| 214.63 | 0.684 | 8.23 | -- | -- | -- | -- | -- | -0.0195 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.30 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 2 | 81.27 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 3 | 81.30 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 4 | 81.41 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 4 |
| 5 | 81.66 | humidity | 50 | 14400 | > th | dose independent | rect. | 5 | 6 |
| 6 | 81.69 | humidity | 50 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 7 | 81.69 | humidity | 50 | 14400 | > th | dose independent | rect. | 18 | 17 |
| 9 | 81.72 | humidity | 50 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 10 | 81.73 | humidity | 60 | 14400 | > th | dose independent | rect. | 5 | 4 |
| 13 | 81.74 | humidity | 60 | 14400 | > th | dose independent | rect. | 7 | 2 |
| 14 | 81.75 | humidity | 60 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 16 | 81.75 | humidity | 50 | 14400 | > th | dose independent | rect. | 20 | 15 |
| 18 | 81.77 | humidity | 50 | 14400 | > th | dose independent | rect. | 23 | 12 |
| 19 | 81.77 | humidity | 50 | 14400 | < th | dose dependent | rect. | 9 | 3 |
| 20 | 81.78 | humidity | 50 | 14400 | > th | dose independent | sin | 8 | NA |
| 31 | 81.78 | humidity | 60 | 14400 | < th | dose dependent | rect. | 20 | 13 |
| 48 | 81.79 | humidity | 50 | 14400 | > th | dose independent | rect. | 1 | 10 |
| 57 | 81.80 | humidity | 60 | 14400 | < th | dose dependent | rect. | 6 | 3 |
| 67 | 81.82 | humidity | 50 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 68 | 81.82 | humidity | 50 | 14400 | > th | dose independent | rect. | 7 | 7 |
| 69 | 81.82 | humidity | 50 | 14400 | > th | dose independent | rect. | 5 | 9 |
| 75 | 81.83 | humidity | 50 | 14400 | > th | dose independent | rect. | 20 | 18 |
| 91 | 81.85 | humidity | 50 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 128 | 81.87 | humidity | 50 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 149 | 81.89 | humidity | 50 | 14400 | < th | dose independent | sin | 8 | NA |
| 196 | 81.97 | wind | 1 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 227 | 82.12 | humidity | 50 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 284 | 82.22 | wind | 3 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 287 | 82.23 | humidity | 50 | 14400 | < th | dose dependent | sin | 9 | NA |
| 351 | 82.50 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 6 |
| 363 | 82.57 | humidity | 50 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 434 | 82.70 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 481 | 82.77 | wind | 1 | 14400 | > th | dose independent | rect. | 22 | 4 |
| 483 | 82.78 | wind | 3 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 511 | 82.82 | humidity | 50 | 14400 | < th | dose dependent | rect. | 13 | 23 |
| 548 | 82.87 | humidity | 50 | 14400 | < th | dose dependent | no | NA | NA |
| 677 | 82.90 | wind | 1 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 716 | 82.94 | wind | 1 | 14400 | < th | dose dependent | rect. | 21 | 16 |
| 718 | 82.95 | wind | 1 | 14400 | < th | dose independent | rect. | 22 | 5 |
| 724 | 82.95 | wind | 1 | 14400 | < th | dose dependent | rect. | 19 | 18 |
| 726 | 82.96 | wind | 1 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 734 | 82.98 | wind | 1 | 14400 | > th | dose independent | rect. | 6 | 7 |
| 805 | 83.12 | humidity | 50 | 14400 | > th | dose independent | rect. | 5 | 16 |
| 838 | 83.13 | humidity | 50 | 14400 | > th | dose independent | rect. | 1 | 20 |
| 854 | 83.14 | humidity | 50 | 14400 | > th | dose independent | no | NA | NA |
| 965 | 83.22 | wind | 1 | 14400 | < th | dose dependent | rect. | 16 | 21 |