Os04g0503700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : DIE2/ALG10 family protein.
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Os04g0503700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : DIE2/ALG10 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.47 | 0.237 | 9.68 | -0.496 | 0.281 | -0.736 | -0.503 | 0.207 | -0.127 | 3.63 | 26.4 | 23 | -- | -- |
| 25.52 | 0.235 | 9.68 | -0.462 | 0.286 | -0.749 | -0.424 | -- | -0.12 | 3.73 | 26.4 | 26 | -- | -- |
| 25.99 | 0.237 | 9.68 | -0.434 | 0.29 | -0.762 | -- | -0.101 | -0.121 | 4.01 | 26.4 | 32 | -- | -- |
| 26 | 0.237 | 9.68 | -0.451 | 0.288 | -0.748 | -- | -- | -0.119 | 4.03 | 26.41 | 33 | -- | -- |
| 28.58 | 0.25 | 9.66 | -0.393 | -- | -0.689 | -- | -0.163 | -0.0405 | -- | 23.5 | 18 | -- | -- |
| 34.02 | 0.273 | 9.64 | -0.278 | 0.136 | -- | -0.375 | -- | 0.0461 | 4.94 | -- | -- | -- | -- |
| 34.11 | 0.273 | 9.64 | -0.276 | 0.152 | -- | -- | -- | 0.0483 | 6.64 | -- | -- | -- | -- |
| 28.62 | 0.25 | 9.66 | -0.412 | -- | -0.667 | -- | -- | -0.0455 | -- | 23.6 | 25 | -- | -- |
| 30.95 | 0.261 | 9.66 | -- | 0.233 | -0.56 | -- | -- | -0.0284 | 4.32 | 26.3 | 46 | -- | -- |
| 35.32 | 0.278 | 9.64 | -0.272 | -- | -- | -- | -- | 0.0514 | -- | -- | -- | -- | -- |
| 36.11 | 0.281 | 9.63 | -- | 0.149 | -- | -- | -- | 0.079 | 6.75 | -- | -- | -- | -- |
| 32.78 | 0.268 | 9.65 | -- | -- | -0.526 | -- | -- | 0.0175 | -- | 23.6 | 25 | -- | -- |
| 37.27 | 0.285 | 9.64 | -- | -- | -- | -- | -- | 0.0815 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.34 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 3 | 25.51 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 20 |
| 25 | 25.78 | temperature | 25 | 10 | < th | dose dependent | rect. | 8 | 23 |
| 38 | 25.86 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 39 | 25.87 | temperature | 25 | 10 | < th | dose dependent | rect. | 14 | 22 |
| 40 | 25.87 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 45 | 25.88 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 47 | 25.88 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 53 | 25.89 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 54 | 25.90 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 64 | 25.92 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 65 | 25.92 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 69 | 25.95 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 128 | 26.31 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 16 |
| 176 | 26.45 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 21 |
| 178 | 26.46 | temperature | 15 | 10 | > th | dose dependent | rect. | 20 | 20 |
| 180 | 26.47 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 14 |
| 181 | 26.47 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 16 |
| 228 | 26.60 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 9 |
| 248 | 26.63 | temperature | 25 | 10 | < th | dose dependent | sin | 17 | NA |
| 267 | 26.66 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 19 |
| 304 | 26.73 | temperature | 25 | 720 | < th | dose dependent | sin | 20 | NA |
| 325 | 26.76 | temperature | 15 | 270 | > th | dose independent | rect. | 17 | 22 |
| 334 | 26.78 | temperature | 10 | 720 | > th | dose dependent | sin | 18 | NA |
| 456 | 26.95 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 17 |
| 679 | 27.20 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 22 |
| 686 | 27.21 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 786 | 27.27 | temperature | 20 | 30 | < th | dose dependent | rect. | 19 | 17 |
| 843 | 27.31 | temperature | 20 | 90 | > th | dose independent | rect. | 19 | 20 |
| 942 | 27.36 | temperature | 15 | 270 | > th | dose dependent | sin | 11 | NA |