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Os04g0501800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF1068 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.0146) R2 : 0.00203
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0297 (0.0308) R2dN8 : 0.00262 R2N8 : 0.00203
σ : 0.276
deviance : 34.92
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.62 0.218 10.7 -0.586 0.138 -0.326 1.06 0.11 -0.147 3.92 1011 4743 -- --
21.65 0.217 10.7 -0.565 0.139 -0.332 1.04 -- -0.143 3.91 1012 4733 -- --
24.46 0.23 10.7 -0.605 0.171 -0.32 -- 0.0894 -0.162 5.82 1010 4693 -- --
24.39 0.23 10.7 -0.597 0.205 -0.27 -- -- -0.161 5.64 1010 8484 -- --
26.05 0.238 10.7 -0.577 -- -0.319 -- 0.0379 -0.145 -- 1011 4560 -- --
24.33 0.231 10.7 -0.478 0.148 -- 1.03 -- -0.0818 3.96 -- -- -- --
26.88 0.243 10.7 -0.491 0.188 -- -- -- -0.0878 5.97 -- -- -- --
26.05 0.238 10.7 -0.615 -- -0.269 -- -- -0.157 -- 1011 8486 -- --
32.83 0.267 10.7 -- 0.177 -0.0963 -- -- -0.0539 6.15 1008 9997 -- --
28.72 0.25 10.7 -0.485 -- -- -- -- -0.0835 -- -- -- -- --
33.22 0.27 10.7 -- 0.181 -- -- -- -0.0332 6.11 -- -- -- --
34.47 0.273 10.7 -- -- -0.104 -- -- -0.0512 -- 1008 9989 -- --
34.92 0.276 10.7 -- -- -- -- -- -0.0297 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 19.47 temperature 10.0 270 > th dose dependent rect. 19 9
2 19.70 temperature 10.0 90 > th dose dependent rect. 21 8
3 19.74 humidity 80.0 10 < th dose independent rect. 11 5
5 19.77 radiation 20.0 14400 < th dose independent rect. 22 8
8 19.84 wind 5.0 270 < th dose independent rect. 18 10
9 19.86 radiation 1.0 270 > th dose independent rect. 8 6
13 20.08 temperature 25.0 270 < th dose independent rect. 11 21
19 20.14 humidity 50.0 270 > th dose independent rect. 8 6
20 20.14 temperature 15.0 270 > th dose independent rect. 18 10
23 20.18 wind 9.0 270 < th dose independent rect. 14 18
24 20.19 wind 9.0 90 < th dose dependent rect. 20 9
26 20.21 precipitation 0.1 270 < th dose independent rect. 8 6
28 20.21 precipitation 0.1 270 < th dose dependent rect. 8 6
29 20.22 temperature 10.0 270 > th dose independent rect. 8 6
30 20.22 atmosphere 995.0 270 > th dose independent rect. 8 6
31 20.22 atmosphere 1015.0 270 < th dose independent rect. 8 6
32 20.22 temperature 10.0 270 > th dose independent rect. 14 18
37 20.25 radiation 10.0 270 > th dose independent rect. 11 1
38 20.25 precipitation 0.1 270 < th dose independent rect. 18 10
39 20.25 precipitation 0.1 270 < th dose dependent rect. 18 10
40 20.26 wind 9.0 270 < th dose independent rect. 8 6
41 20.26 humidity 80.0 90 < th dose independent rect. 9 7
43 20.26 radiation 40.0 270 < th dose independent rect. 14 18
44 20.27 humidity 80.0 30 < th dose independent rect. 11 3
46 20.27 humidity 80.0 10 < th dose independent rect. 9 7
52 20.29 wind 9.0 270 < th dose independent rect. 4 14
55 20.33 humidity 60.0 270 > th dose independent rect. 18 10
60 20.38 radiation 10.0 10 > th dose independent rect. 11 6
63 20.39 humidity 80.0 270 < th dose independent rect. 11 1
67 20.39 radiation 1.0 270 < th dose independent rect. 18 10
69 20.39 radiation 10.0 270 < th dose dependent rect. 18 10
74 20.40 atmosphere 995.0 270 > th dose independent rect. 14 18
80 20.42 radiation 1.0 10 > th dose independent rect. 9 7
85 20.42 temperature 30.0 270 < th dose independent rect. 18 10
94 20.42 temperature 10.0 270 > th dose independent rect. 4 14
95 20.42 atmosphere 1015.0 270 < th dose independent rect. 4 14
107 20.44 atmosphere 995.0 270 > th dose independent rect. 18 10
110 20.45 precipitation 0.1 270 < th dose independent rect. 14 18
111 20.45 precipitation 0.1 270 < th dose dependent rect. 14 18
112 20.46 temperature 20.0 270 > th dose independent rect. 9 4
132 20.50 humidity 80.0 270 < th dose independent rect. 7 7
133 20.50 temperature 10.0 10 > th dose dependent rect. 21 9
138 20.51 humidity 90.0 10 < th dose dependent rect. 11 5
154 20.55 humidity 60.0 14400 > th dose independent rect. 22 9
159 20.56 wind 1.0 30 > th dose independent rect. 16 17
166 20.57 temperature 15.0 90 > th dose independent rect. 20 9
176 20.59 wind 1.0 270 > th dose independent rect. 8 6
180 20.59 precipitation 0.1 270 < th dose independent rect. 4 14
184 20.59 precipitation 0.1 270 < th dose dependent rect. 4 14
188 20.61 precipitation 0.1 90 < th dose independent rect. 20 9
191 20.61 precipitation 0.1 90 < th dose dependent rect. 20 9
197 20.63 wind 1.0 270 > th dose independent rect. 14 18
243 20.71 temperature 10.0 270 > th dose dependent rect. 18 20
275 20.75 wind 1.0 30 > th dose independent rect. 14 21
276 20.75 humidity 90.0 10 < th dose dependent rect. 9 7
285 20.77 temperature 20.0 270 > th dose independent rect. 11 1
292 20.77 wind 1.0 30 > th dose independent rect. 16 19
334 20.82 temperature 10.0 270 > th dose dependent rect. 19 18
361 20.85 radiation 1.0 90 < th dose independent rect. 20 9
370 20.85 radiation 1.0 90 < th dose dependent rect. 20 9
379 20.86 temperature 30.0 90 < th dose independent rect. 20 9
380 20.86 humidity 50.0 90 > th dose independent rect. 20 9
383 20.86 atmosphere 995.0 90 > th dose independent rect. 20 9
393 20.86 humidity 90.0 270 < th dose dependent rect. 11 1
394 20.86 humidity 90.0 270 < th dose dependent rect. 8 6
402 20.87 humidity 50.0 10 > th dose independent rect. 16 17
405 20.87 radiation 40.0 10 < th dose independent rect. 16 19
406 20.87 humidity 90.0 30 < th dose dependent rect. 11 3
407 20.87 radiation 10.0 720 < th dose dependent rect. 12 5
452 20.91 temperature 20.0 10 > th dose independent rect. 11 5
485 20.92 radiation 20.0 10 < th dose dependent rect. 6 15
511 20.93 humidity 50.0 90 > th dose independent rect. 16 17
522 20.94 temperature 10.0 1440 > th dose independent rect. 10 7
540 20.94 temperature 10.0 1440 > th dose independent rect. 17 17
548 20.94 humidity 90.0 270 < th dose dependent rect. 9 4
557 20.95 wind 9.0 10 < th dose dependent rect. 21 9
558 20.96 humidity 50.0 270 > th dose independent rect. 11 1
567 20.96 temperature 30.0 270 < th dose dependent rect. 13 19
568 20.97 temperature 20.0 30 > th dose independent rect. 11 3
575 20.97 wind 1.0 270 > th dose independent rect. 4 14
601 20.98 wind 9.0 10 < th dose independent rect. 16 17
612 20.99 temperature 10.0 10 > th dose independent rect. 9 7
614 20.99 atmosphere 1015.0 10 < th dose independent rect. 9 7
615 20.99 precipitation 0.1 10 < th dose independent rect. 9 7
618 20.99 temperature 25.0 720 < th dose independent rect. 11 13
619 20.99 temperature 10.0 10 > th dose independent rect. 16 17
620 20.99 radiation 40.0 10 < th dose independent rect. 16 17
623 20.99 precipitation 0.1 10 < th dose dependent rect. 9 7
635 21.01 temperature 10.0 270 > th dose independent rect. 11 1
636 21.01 atmosphere 995.0 270 > th dose independent rect. 11 1
637 21.01 atmosphere 1015.0 270 < th dose independent rect. 11 1
638 21.01 precipitation 0.1 270 < th dose independent rect. 11 1
647 21.01 temperature 10.0 270 > th dose independent rect. 12 23
648 21.01 precipitation 0.1 270 < th dose dependent rect. 11 1
660 21.02 humidity 50.0 10 > th dose independent rect. 16 19
678 21.04 radiation 10.0 10 > th dose independent sin 20 NA
679 21.04 wind 9.0 270 < th dose independent rect. 11 1
692 21.04 radiation 1.0 720 < th dose independent rect. 9 16
697 21.04 radiation 1.0 90 < th dose dependent sin 10 NA
717 21.05 humidity 50.0 270 > th dose independent rect. 14 18
727 21.06 wind 1.0 270 > th dose independent rect. 11 1
730 21.06 temperature 10.0 1440 > th dose independent rect. 12 5
736 21.06 wind 9.0 10 < th dose independent rect. 9 7
737 21.06 atmosphere 995.0 10 > th dose independent rect. 9 7
745 21.06 atmosphere 1015.0 270 < th dose independent rect. 14 18
746 21.06 temperature 10.0 1440 > th dose independent rect. 17 19
752 21.06 temperature 10.0 270 > th dose dependent rect. 8 5
788 21.09 atmosphere 1015.0 90 < th dose independent rect. 21 8
792 21.09 atmosphere 995.0 10 > th dose independent rect. 16 17
795 21.09 radiation 40.0 30 < th dose independent rect. 14 21
797 21.09 wind 9.0 270 < th dose independent rect. 12 23
805 21.09 radiation 20.0 10 < th dose dependent rect. 21 9
834 21.11 humidity 80.0 90 < th dose independent sin 1 NA
837 21.11 temperature 10.0 10 > th dose independent rect. 11 5
839 21.11 atmosphere 1015.0 10 < th dose independent rect. 11 5
841 21.11 precipitation 0.1 10 < th dose independent rect. 11 5
854 21.11 temperature 10.0 10 > th dose independent rect. 16 19
855 21.11 precipitation 0.1 10 < th dose dependent rect. 11 5
859 21.11 radiation 40.0 270 < th dose dependent rect. 14 18
861 21.12 humidity 80.0 270 < th dose independent sin 3 NA
867 21.12 radiation 1.0 720 < th dose independent rect. 10 7
871 21.12 wind 5.0 10 < th dose independent rect. 21 9
880 21.12 wind 9.0 10 < th dose independent rect. 16 19
886 21.12 temperature 10.0 10 > th dose dependent rect. 11 5
912 21.13 radiation 1.0 720 < th dose dependent rect. 9 16
913 21.13 humidity 90.0 270 < th dose dependent rect. 20 18
942 21.15 wind 9.0 10 < th dose independent rect. 11 5
982 21.16 atmosphere 995.0 10 > th dose independent rect. 11 5