Os04g0490300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0490300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 277.33 | 0.782 | 5.28 | 2.64 | 0.809 | 2.98 | -0.0704 | 6.94 | 0.413 | 0.537 | 1.139 | 1432 | -- | -- |
| 277.78 | 0.776 | 5.14 | 3.38 | 0.702 | 2.06 | 0.205 | -- | 0.693 | 0.02 | 4.372 | 1447 | -- | -- |
| 274.88 | 0.772 | 5.25 | 2.92 | 0.831 | 2.19 | -- | 3.78 | 0.428 | 0.0361 | 2.534 | 1425 | -- | -- |
| 276.68 | 0.775 | 5.14 | 3.3 | 0.695 | 1.91 | -- | -- | 0.651 | 0.63 | 4.659 | 1445 | -- | -- |
| 285.01 | 0.786 | 5.16 | 2.98 | -- | 2.34 | -- | 2.64 | 0.559 | -- | 4.202 | 1548 | -- | -- |
| 338.88 | 0.863 | 5.22 | 3 | 0.707 | -- | -0.469 | -- | 0.307 | 0.72 | -- | -- | -- | -- |
| 339.59 | 0.863 | 5.22 | 3.02 | 0.709 | -- | -- | -- | 0.311 | 0.367 | -- | -- | -- | -- |
| 282.46 | 0.783 | 5.13 | 3.26 | -- | 2.31 | -- | -- | 0.651 | -- | 5.052 | 1576 | -- | -- |
| 531.36 | 1.07 | 5.24 | -- | 0.516 | 1.71 | -- | -- | 0.203 | 23.5 | 19.85 | 3189 | -- | -- |
| 371.21 | 0.9 | 5.21 | 3.04 | -- | -- | -- | -- | 0.322 | -- | -- | -- | -- | -- |
| 579.54 | 1.13 | 5.3 | -- | 0.754 | -- | -- | -- | -0.0254 | 0.574 | -- | -- | -- | -- |
| 533.05 | 1.08 | 5.12 | -- | -- | 2.4 | -- | -- | 0.614 | -- | 10 | 1602 | -- | -- |
| 615.19 | 1.16 | 5.28 | -- | -- | -- | -- | -- | -0.0154 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 263.41 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 2 | 263.63 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 3 | 265.96 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 20 | 4 |
| 4 | 266.01 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 21 | 266.96 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 62 | 268.01 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 11 | NA |
| 116 | 269.20 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 121 | 269.26 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 198 | 270.09 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 19 | 14 |
| 225 | 270.28 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 19 | 8 |
| 233 | 270.32 | temperature | 25.0 | 14400 | > th | dose dependent | no | NA | NA |
| 235 | 270.32 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 271 | 270.43 | temperature | 25.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 331 | 270.63 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 347 | 270.70 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 19 | 14 |
| 353 | 270.73 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 386 | 270.89 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 22 | 11 |
| 404 | 270.99 | temperature | 25.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 464 | 271.23 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 19 | 7 |
| 504 | 271.39 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 2 | 7 |
| 505 | 271.39 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 19 | 9 |
| 517 | 271.45 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 672 | 272.00 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 683 | 272.05 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 12 | 8 |
| 691 | 272.06 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 13 | 6 |
| 702 | 272.06 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 12 | 19 |
| 792 | 272.28 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 12 | 7 |
| 837 | 272.33 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 839 | 272.33 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 16 | 7 |
| 897 | 272.41 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 947 | 272.47 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 17 | 23 |
| 949 | 272.48 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 978 | 272.50 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 6 | 13 |
| 993 | 272.50 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 2 | 18 |