Os04g0477300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : No apical meristem (NAM) protein domain containing protein.
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Os04g0477300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : No apical meristem (NAM) protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 98.94 | 0.467 | 6.56 | 0.183 | 0.369 | 0.727 | 0.0932 | 0.315 | 0.562 | 13.1 | 20 | 165 | -- | -- |
| 99.03 | 0.463 | 6.55 | 0.22 | 0.366 | 0.661 | 0.0508 | -- | 0.578 | 13 | 20.5 | 171 | -- | -- |
| 98.97 | 0.463 | 6.56 | 0.19 | 0.368 | 0.724 | -- | 0.295 | 0.562 | 13.1 | 20.02 | 164 | -- | -- |
| 98.95 | 0.463 | 6.55 | 0.218 | 0.371 | 0.655 | -- | -- | 0.578 | 13 | 20.4 | 151 | -- | -- |
| 106.04 | 0.48 | 6.56 | 0.205 | -- | 0.697 | -- | 0.259 | 0.568 | -- | 20.04 | 420 | -- | -- |
| 114.95 | 0.503 | 6.58 | 0.0212 | 0.242 | -- | 0.176 | -- | 0.451 | 12 | -- | -- | -- | -- |
| 115.04 | 0.502 | 6.58 | 0.0291 | 0.243 | -- | -- | -- | 0.452 | 12.4 | -- | -- | -- | -- |
| 106.19 | 0.48 | 6.56 | 0.26 | -- | 0.678 | -- | -- | 0.576 | -- | 20 | 575 | -- | -- |
| 100.11 | 0.466 | 6.55 | -- | 0.373 | 0.609 | -- | -- | 0.559 | 13 | 20.4 | 148 | -- | -- |
| 118.74 | 0.509 | 6.58 | 0.0208 | -- | -- | -- | -- | 0.448 | -- | -- | -- | -- | -- |
| 115.06 | 0.502 | 6.58 | -- | 0.243 | -- | -- | -- | 0.449 | 12.4 | -- | -- | -- | -- |
| 107.68 | 0.483 | 6.55 | -- | -- | 0.601 | -- | -- | 0.551 | -- | 20.1 | 391 | -- | -- |
| 118.76 | 0.509 | 6.58 | -- | -- | -- | -- | -- | 0.446 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 95.27 | temperature | 20.0 | 90 | > th | dose independent | rect. | 15 | 14 |
| 6 | 96.97 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 22 |
| 7 | 97.13 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 15 | 14 |
| 9 | 97.38 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 20 |
| 10 | 97.39 | temperature | 20.0 | 720 | > th | dose independent | rect. | 15 | 12 |
| 14 | 97.67 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 22 |
| 23 | 97.87 | temperature | 20.0 | 90 | > th | dose independent | rect. | 13 | 23 |
| 28 | 98.12 | temperature | 20.0 | 90 | < th | dose independent | rect. | 16 | 19 |
| 44 | 98.37 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 17 |
| 46 | 98.42 | temperature | 20.0 | 720 | > th | dose independent | rect. | 7 | 20 |
| 50 | 98.46 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 17 | 9 |
| 54 | 98.54 | temperature | 20.0 | 90 | > th | dose independent | rect. | 15 | 18 |
| 65 | 98.72 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 10 |
| 72 | 98.79 | temperature | 20.0 | 90 | < th | dose independent | rect. | 13 | 22 |
| 83 | 98.86 | temperature | 20.0 | 90 | < th | dose independent | rect. | 5 | 22 |
| 86 | 98.88 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 23 |
| 107 | 99.04 | temperature | 20.0 | 90 | < th | dose independent | rect. | 16 | 22 |
| 122 | 99.13 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 5 |
| 136 | 99.20 | temperature | 20.0 | 720 | > th | dose independent | rect. | 20 | 7 |
| 185 | 99.45 | temperature | 20.0 | 90 | < th | dose independent | rect. | 21 | 23 |
| 213 | 99.57 | temperature | 20.0 | 90 | < th | dose independent | no | NA | NA |
| 232 | 99.66 | temperature | 20.0 | 270 | > th | dose independent | no | NA | NA |
| 256 | 99.75 | temperature | 20.0 | 270 | > th | dose independent | sin | 11 | NA |
| 273 | 99.82 | temperature | 20.0 | 270 | > th | dose dependent | sin | 14 | NA |
| 326 | 100.06 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 7 |
| 330 | 100.08 | temperature | 20.0 | 720 | > th | dose independent | rect. | 23 | 2 |
| 338 | 100.10 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 14 | 8 |
| 352 | 100.14 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 13 | 10 |
| 378 | 100.22 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 5 | 21 |
| 379 | 100.23 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 13 | 10 |
| 385 | 100.24 | temperature | 30.0 | 90 | < th | dose dependent | sin | 13 | NA |
| 387 | 100.26 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 14 | 8 |
| 402 | 100.30 | temperature | 20.0 | 10 | > th | dose independent | sin | 14 | NA |
| 442 | 100.41 | temperature | 20.0 | 720 | < th | dose independent | rect. | 8 | 17 |
| 449 | 100.43 | temperature | 20.0 | 90 | > th | dose independent | sin | 15 | NA |
| 450 | 100.43 | temperature | 20.0 | 720 | > th | dose independent | sin | 16 | NA |
| 453 | 100.44 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 13 | 20 |
| 484 | 100.53 | temperature | 20.0 | 90 | < th | dose independent | sin | 12 | NA |
| 485 | 100.53 | temperature | 20.0 | 720 | < th | dose independent | rect. | 14 | 11 |
| 527 | 100.62 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 5 |
| 530 | 100.63 | temperature | 20.0 | 720 | < th | dose independent | rect. | 11 | 14 |
| 618 | 100.81 | temperature | 20.0 | 720 | < th | dose independent | rect. | 19 | 6 |
| 661 | 100.87 | temperature | 20.0 | 720 | < th | dose independent | sin | 18 | NA |
| 840 | 101.19 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 10 | 8 |
| 845 | 101.20 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 14 |
| 936 | 101.35 | temperature | 20.0 | 720 | < th | dose independent | rect. | 21 | 3 |
| 979 | 101.43 | temperature | 20.0 | 90 | < th | dose independent | rect. | 16 | 11 |