Os04g0471400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0471400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.81 | 0.265 | 11.4 | 1.04 | 1.2 | -0.403 | -0.0703 | 2.99 | 0.286 | 6.14 | 9.798 | 3810 | -- | -- |
| 36.95 | 0.285 | 11.5 | 0.316 | 1.09 | -0.872 | -0.18 | -- | 0.127 | 6.98 | 5.216 | 10187 | -- | -- |
| 31.82 | 0.263 | 11.4 | 1.04 | 1.2 | -0.405 | -- | 2.99 | 0.286 | 6.14 | 9.756 | 3794 | -- | -- |
| 37.03 | 0.285 | 11.5 | 0.311 | 1.09 | -0.866 | -- | -- | 0.127 | 6.98 | 5.216 | 10187 | -- | -- |
| 97.17 | 0.462 | 11.5 | 0.56 | -- | -1.22 | -- | 1.21 | 0.237 | -- | 12.7 | 3503 | -- | -- |
| 44.21 | 0.312 | 11.6 | 0.144 | 1.2 | -- | -0.0301 | -- | 0.00549 | 6.24 | -- | -- | -- | -- |
| 44.22 | 0.311 | 11.6 | 0.144 | 1.2 | -- | -- | -- | 0.0056 | 6.24 | -- | -- | -- | -- |
| 77.14 | 0.409 | 11.5 | 0.524 | -- | -1.67 | -- | -- | 0.262 | -- | 7.409 | 355 | -- | -- |
| 39.35 | 0.294 | 11.6 | -- | 1.11 | -0.715 | -- | -- | 0.0743 | 6.82 | 5.216 | 10187 | -- | -- |
| 119.04 | 0.51 | 11.6 | 0.176 | -- | -- | -- | -- | 0.0319 | -- | -- | -- | -- | -- |
| 44.76 | 0.313 | 11.6 | -- | 1.2 | -- | -- | -- | -0.0104 | 6.23 | -- | -- | -- | -- |
| 83.86 | 0.427 | 11.6 | -- | -- | -1.49 | -- | -- | 0.184 | -- | 7.571 | 346 | -- | -- |
| 119.86 | 0.511 | 11.6 | -- | -- | -- | -- | -- | 0.0123 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.25 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 13 |
| 2 | 30.28 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 15 |
| 15 | 30.36 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 9 |
| 20 | 30.38 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 4 | NA |
| 28 | 30.43 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 35 | 30.48 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 5 |
| 77 | 30.77 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 14 |
| 78 | 30.77 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 11 | 20 |
| 142 | 30.89 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 174 | 30.96 | humidity | 90.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 249 | 31.21 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 14 | NA |
| 278 | 31.30 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 279 | 31.31 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 13 |
| 289 | 31.34 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 307 | 31.37 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 315 | 31.39 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 19 | 4 |
| 324 | 31.41 | wind | 9.0 | 43200 | < th | dose independent | rect. | 21 | 4 |
| 335 | 31.43 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 10 | 4 |
| 337 | 31.44 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 338 | 31.44 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 14 | 17 |
| 373 | 31.49 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 409 | 31.53 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 412 | 31.53 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 413 | 31.54 | wind | 9.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 414 | 31.54 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 17 | 11 |
| 425 | 31.55 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 21 | 5 |
| 427 | 31.56 | humidity | 90.0 | 14400 | < th | dose independent | sin | 7 | NA |
| 428 | 31.56 | wind | 9.0 | 43200 | > th | dose independent | rect. | 21 | 3 |
| 433 | 31.56 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 460 | 31.59 | wind | 9.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 473 | 31.61 | wind | 7.0 | 43200 | > th | dose independent | rect. | 21 | 7 |
| 483 | 31.62 | wind | 7.0 | 43200 | < th | dose independent | rect. | 21 | 7 |
| 554 | 31.68 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 7 |
| 560 | 31.69 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 7 |
| 586 | 31.71 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 7 |
| 591 | 31.71 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 20 | 5 |
| 594 | 31.71 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 7 |
| 599 | 31.72 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 15 |
| 605 | 31.72 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 644 | 31.76 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 658 | 31.77 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 676 | 31.78 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 680 | 31.78 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 18 |
| 691 | 31.78 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 18 | 14 |
| 693 | 31.79 | wind | 7.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 705 | 31.79 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 714 | 31.79 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 8 | 16 |
| 724 | 31.80 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 730 | 31.80 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 8 | 16 |
| 735 | 31.81 | wind | 7.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 736 | 31.81 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 772 | 31.82 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 2 | 12 |
| 774 | 31.82 | wind | 7.0 | 43200 | > th | dose independent | rect. | 21 | 15 |
| 775 | 31.82 | wind | 7.0 | 43200 | < th | dose independent | rect. | 21 | 15 |
| 782 | 31.82 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 9 | 5 |
| 811 | 31.83 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 9 | 5 |
| 829 | 31.84 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 11 | NA |
| 831 | 31.84 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 850 | 31.84 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 21 | 16 |
| 859 | 31.85 | humidity | 90.0 | 14400 | > th | dose independent | no | NA | NA |
| 865 | 31.85 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 889 | 31.85 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 6 | 22 |
| 890 | 31.86 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 891 | 31.86 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 892 | 31.86 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 901 | 31.86 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 935 | 31.87 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 937 | 31.87 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 938 | 31.87 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 951 | 31.87 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 984 | 31.88 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 18 |
| 986 | 31.88 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 7 | NA |