Os04g0464500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function FAF1 domain containing protein.
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Os04g0464500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function FAF1 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11 | 0.156 | 9.8 | 0.637 | 0.501 | -0.581 | 0.303 | 4.07 | -0.174 | 11 | 30.2 | 3770 | -- | -- |
| 11.56 | 0.158 | 9.87 | -0.00683 | 0.512 | -0.125 | 0.284 | -- | -0.162 | 11.2 | 30.45 | 7938 | -- | -- |
| 11.38 | 0.157 | 9.8 | 0.635 | 0.499 | -0.577 | -- | 3.99 | -0.175 | 10.9 | 30.1 | 3718 | -- | -- |
| 11.77 | 0.16 | 9.87 | 0.0259 | 0.503 | -0.129 | -- | -- | -0.146 | 10.9 | 30.4 | 8071 | -- | -- |
| 26.54 | 0.24 | 9.81 | 0.717 | -- | -0.703 | -- | 4.31 | -0.18 | -- | 30.02 | 3767 | -- | -- |
| 12.13 | 0.163 | 9.87 | -0.0222 | 0.516 | -- | 0.296 | -- | -0.172 | 11 | -- | -- | -- | -- |
| 12.49 | 0.166 | 9.87 | -0.0104 | 0.515 | -- | -- | -- | -0.171 | 10.9 | -- | -- | -- | -- |
| 27.33 | 0.243 | 9.87 | 0.0406 | -- | -0.202 | -- | -- | -0.133 | -- | 31.61 | 8062 | -- | -- |
| 11.78 | 0.16 | 9.87 | -- | 0.504 | -0.126 | -- | -- | -0.147 | 10.9 | 30.41 | 8071 | -- | -- |
| 28.93 | 0.251 | 9.89 | -0.0215 | -- | -- | -- | -- | -0.175 | -- | -- | -- | -- | -- |
| 12.5 | 0.165 | 9.87 | -- | 0.515 | -- | -- | -- | -0.17 | 10.9 | -- | -- | -- | -- |
| 27.32 | 0.243 | 9.88 | -- | -- | -0.185 | -- | -- | -0.131 | -- | 31.7 | 8074 | -- | -- |
| 28.94 | 0.251 | 9.89 | -- | -- | -- | -- | -- | -0.173 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 10.12 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 21 |
| 2 | 10.13 | wind | 7.0 | 270 | < th | dose independent | rect. | 4 | 3 |
| 3 | 10.13 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 3 |
| 4 | 10.13 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 3 |
| 7 | 10.14 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 3 |
| 9 | 10.14 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 3 |
| 10 | 10.14 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 3 |
| 13 | 10.14 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 3 |
| 14 | 10.14 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 3 |
| 15 | 10.14 | radiation | 30.0 | 270 | < th | dose independent | rect. | 4 | 3 |
| 17 | 10.14 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 21 |
| 20 | 10.17 | wind | 1.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 21 | 10.18 | wind | 9.0 | 270 | < th | dose dependent | rect. | 4 | 3 |
| 22 | 10.18 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 20 |
| 26 | 10.19 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 9 | 20 |
| 27 | 10.19 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 21 |
| 28 | 10.19 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 21 |
| 37 | 10.20 | wind | 9.0 | 90 | < th | dose independent | rect. | 9 | 20 |
| 38 | 10.20 | temperature | 10.0 | 90 | > th | dose independent | rect. | 9 | 20 |
| 43 | 10.22 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 3 |
| 45 | 10.23 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 3 |
| 47 | 10.24 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 4 | 3 |
| 48 | 10.25 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 9 | 20 |
| 50 | 10.25 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 9 | 20 |
| 51 | 10.27 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 9 | 20 |
| 54 | 10.28 | humidity | 80.0 | 270 | > th | dose independent | rect. | 5 | 1 |
| 56 | 10.28 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 70 | 10.29 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 21 |
| 89 | 10.32 | wind | 5.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 99 | 10.32 | radiation | 20.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 105 | 10.33 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 1 |
| 107 | 10.33 | temperature | 30.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 108 | 10.33 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 1 |
| 111 | 10.33 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 1 |
| 112 | 10.33 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 113 | 10.33 | radiation | 20.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 116 | 10.33 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 1 |
| 120 | 10.33 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 21 |
| 121 | 10.33 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 23 |
| 122 | 10.33 | wind | 9.0 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 123 | 10.33 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 135 | 10.35 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 171 | 10.38 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 5 | 1 |
| 173 | 10.38 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 4 | 3 |
| 182 | 10.39 | humidity | 50.0 | 270 | > th | dose independent | rect. | 15 | 17 |
| 190 | 10.40 | radiation | 1.0 | 90 | > th | dose independent | sin | 10 | NA |
| 205 | 10.40 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 4 |
| 208 | 10.40 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 6 | 4 |
| 209 | 10.40 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 6 | 4 |
| 211 | 10.40 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 20 |
| 215 | 10.40 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 1 |
| 244 | 10.42 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 10 | 19 |
| 281 | 10.44 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 5 |
| 335 | 10.49 | temperature | 30.0 | 90 | < th | dose independent | rect. | 16 | 17 |
| 344 | 10.49 | radiation | 1.0 | 90 | < th | dose dependent | sin | 9 | NA |
| 395 | 10.52 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 5 | 5 |
| 406 | 10.52 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 455 | 10.54 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 484 | 10.56 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 7 |
| 486 | 10.56 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 8 | 7 |
| 492 | 10.56 | wind | 7.0 | 10 | < th | dose dependent | rect. | 6 | 3 |
| 528 | 10.58 | temperature | 10.0 | 270 | > th | dose independent | rect. | 8 | 7 |
| 530 | 10.58 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 8 | 7 |
| 531 | 10.58 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 7 |
| 534 | 10.58 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 17 |
| 538 | 10.58 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 21 |
| 539 | 10.58 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 21 |
| 546 | 10.58 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 7 |
| 548 | 10.59 | radiation | 1.0 | 90 | < th | dose independent | sin | 10 | NA |
| 553 | 10.59 | wind | 1.0 | 270 | > th | dose independent | rect. | 8 | 7 |
| 559 | 10.59 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 17 |
| 563 | 10.59 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 4 | 3 |
| 571 | 10.59 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 17 |
| 573 | 10.60 | wind | 7.0 | 10 | < th | dose independent | rect. | 6 | 3 |
| 575 | 10.60 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 3 |
| 577 | 10.60 | temperature | 30.0 | 10 | < th | dose independent | rect. | 6 | 3 |
| 578 | 10.60 | humidity | 50.0 | 10 | > th | dose independent | rect. | 6 | 3 |
| 580 | 10.60 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 6 | 3 |
| 581 | 10.60 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 3 |
| 601 | 10.60 | temperature | 15.0 | 270 | > th | dose independent | rect. | 4 | 14 |
| 608 | 10.60 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 21 |
| 614 | 10.60 | wind | 9.0 | 10 | < th | dose dependent | rect. | 5 | 5 |
| 622 | 10.61 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 3 |
| 648 | 10.61 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 17 |
| 656 | 10.61 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 3 |
| 670 | 10.62 | wind | 9.0 | 270 | < th | dose independent | rect. | 8 | 7 |
| 689 | 10.63 | radiation | 40.0 | 10 | < th | dose independent | rect. | 6 | 3 |
| 737 | 10.64 | wind | 9.0 | 10 | < th | dose independent | rect. | 9 | 21 |
| 739 | 10.64 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 752 | 10.65 | wind | 9.0 | 4320 | < th | dose independent | rect. | 6 | 3 |
| 783 | 10.65 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 15 |
| 788 | 10.65 | wind | 9.0 | 10 | < th | dose independent | rect. | 10 | 19 |
| 804 | 10.65 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 6 |
| 821 | 10.66 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 8 |
| 827 | 10.66 | radiation | 1.0 | 90 | > th | dose independent | rect. | 9 | 10 |
| 835 | 10.66 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 18 | 16 |
| 840 | 10.66 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 17 |
| 851 | 10.66 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 6 | 3 |
| 889 | 10.67 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 18 | 16 |
| 898 | 10.67 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 953 | 10.69 | radiation | 1.0 | 10 | > th | dose independent | rect. | 9 | 9 |
| 983 | 10.70 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 6 | 3 |
| 997 | 10.70 | wind | 7.0 | 270 | < th | dose independent | rect. | 18 | 10 |