Os04g0464100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heavy metal transport/detoxification protein domain containing protein.
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Os04g0464100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heavy metal transport/detoxification protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 358.73 | 0.89 | 4.52 | -1.16 | 0.365 | 3.84 | 2.75 | 3.1 | -0.684 | 4.56 | 1019 | 106 | 11.1 | -- |
| 360.09 | 0.884 | 4.54 | -1.16 | 0.351 | 3.73 | 1.94 | -- | -0.672 | 2.01 | 1018 | 155 | 11.7 | -- |
| 373.08 | 0.9 | 4.54 | -1.18 | 0.179 | 3.59 | -- | 1.75 | -0.696 | 13.9 | 1019 | 158 | 10.7 | -- |
| 375.09 | 0.902 | 4.54 | -1.19 | 0.307 | 3.68 | -- | -- | -0.692 | 1.82 | 1017 | 159 | 11.6 | -- |
| 373.12 | 0.9 | 4.53 | -1.19 | -- | 3.6 | -- | 1.39 | -0.698 | -- | 1018 | 184 | 11.2 | -- |
| 417.76 | 0.958 | 4.64 | -1.08 | 1.95 | -- | 1 | -- | -0.896 | 20.2 | -- | -- | -- | -- |
| 420.63 | 0.96 | 4.64 | -1.11 | 1.95 | -- | -- | -- | -0.894 | 20.1 | -- | -- | -- | -- |
| 375.31 | 0.902 | 4.54 | -1.21 | -- | 3.7 | -- | -- | -0.69 | -- | 1018 | 202 | 11.4 | -- |
| 413.68 | 0.947 | 4.51 | -- | 0.137 | 3.48 | -- | -- | -0.567 | 22.4 | 1018 | 164 | 11.3 | -- |
| 630.01 | 1.17 | 4.59 | -1.13 | -- | -- | -- | -- | -0.918 | -- | -- | -- | -- | -- |
| 453.17 | 0.996 | 4.61 | -- | 1.96 | -- | -- | -- | -0.77 | 20.1 | -- | -- | -- | -- |
| 413.76 | 0.947 | 4.51 | -- | -- | 3.58 | -- | -- | -0.567 | -- | 1019 | 192 | 11.4 | -- |
| 663.56 | 1.2 | 4.56 | -- | -- | -- | -- | -- | -0.793 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 354.31 | atmosphere | 1015.0 | 720 | < th | dose dependent | rect. | 11 | 6 |
| 5 | 357.45 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 12 | 13 |
| 7 | 359.12 | atmosphere | 995.0 | 720 | > th | dose dependent | rect. | 9 | 7 |
| 21 | 362.11 | atmosphere | 1015.0 | 90 | < th | dose dependent | sin | 17 | NA |
| 25 | 362.52 | atmosphere | 1015.0 | 270 | < th | dose dependent | sin | 19 | NA |
| 26 | 362.67 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 9 | 7 |
| 47 | 364.68 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 10 | 11 |
| 60 | 365.58 | atmosphere | 995.0 | 270 | > th | dose dependent | sin | 20 | NA |
| 92 | 367.77 | atmosphere | 1000.0 | 270 | > th | dose independent | sin | 19 | NA |
| 139 | 369.67 | atmosphere | 1000.0 | 720 | > th | dose independent | sin | 23 | NA |
| 146 | 369.94 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 10 | 12 |
| 147 | 369.96 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 7 | 13 |
| 174 | 370.80 | temperature | 30.0 | 720 | < th | dose independent | sin | 9 | NA |
| 183 | 370.93 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 12 | 12 |
| 230 | 371.90 | atmosphere | 995.0 | 720 | > th | dose dependent | sin | 0 | NA |
| 259 | 372.71 | atmosphere | 1015.0 | 720 | < th | dose dependent | rect. | 8 | 15 |
| 369 | 374.64 | temperature | 25.0 | 720 | < th | dose independent | rect. | 24 | 16 |
| 372 | 374.69 | atmosphere | 1000.0 | 720 | < th | dose independent | rect. | 12 | 4 |
| 398 | 375.16 | atmosphere | 1000.0 | 270 | > th | dose independent | sin | 17 | NA |
| 412 | 375.35 | wind | 3.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 491 | 376.29 | temperature | 30.0 | 720 | < th | dose independent | rect. | 9 | 5 |
| 493 | 376.31 | atmosphere | 1000.0 | 720 | < th | dose independent | rect. | 9 | 11 |
| 498 | 376.38 | atmosphere | 1000.0 | 720 | < th | dose independent | rect. | 11 | 8 |
| 509 | 376.45 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 551 | 376.98 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 15 |
| 554 | 376.98 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 15 |
| 562 | 377.14 | temperature | 30.0 | 720 | < th | dose independent | rect. | 9 | 2 |
| 585 | 377.40 | temperature | 30.0 | 720 | < th | dose independent | rect. | 19 | 16 |
| 614 | 377.73 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 14 | 14 |
| 621 | 377.83 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 11 | 6 |
| 632 | 377.90 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 21 |
| 656 | 378.12 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 662 | 378.16 | temperature | 30.0 | 720 | < th | dose independent | rect. | 19 | 19 |
| 694 | 378.40 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 1 | 7 |
| 745 | 378.82 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 14 | 8 |
| 758 | 378.91 | atmosphere | 1000.0 | 720 | < th | dose independent | sin | 21 | NA |
| 761 | 378.94 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 15 | 6 |
| 787 | 379.10 | atmosphere | 995.0 | 720 | > th | dose dependent | rect. | 13 | 7 |
| 793 | 379.16 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 13 | 10 |
| 814 | 379.32 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 12 | 8 |
| 856 | 379.63 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 16 | 7 |
| 865 | 379.70 | atmosphere | 1000.0 | 720 | < th | dose dependent | rect. | 15 | 1 |
| 932 | 380.12 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 10 | 13 |
| 950 | 380.25 | temperature | 25.0 | 720 | < th | dose independent | sin | 4 | NA |
| 954 | 380.26 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 14 | 5 |
| 958 | 380.29 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 23 | 23 |
| 960 | 380.29 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 23 | 23 |