Os04g0451100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0451100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.99 | 0.387 | 7.39 | -0.377 | 0.261 | 0.688 | 0.399 | 1.11 | 0.327 | 22.5 | 69 | 2661 | -- | -- |
| 69.77 | 0.389 | 7.38 | -0.29 | 0.269 | 0.764 | 0.276 | -- | 0.32 | 22.2 | 68.46 | 2649 | -- | -- |
| 68.56 | 0.386 | 7.39 | -0.381 | 0.257 | 0.685 | -- | 1.05 | 0.323 | 22 | 69 | 2670 | -- | -- |
| 70.02 | 0.39 | 7.37 | -0.276 | 0.269 | 0.771 | -- | -- | 0.348 | 22 | 68.71 | 2645 | -- | -- |
| 70.81 | 0.392 | 7.39 | -0.372 | -- | 0.673 | -- | 1.42 | 0.289 | -- | 67.77 | 2987 | -- | -- |
| 88.31 | 0.441 | 7.37 | -0.376 | 0.198 | -- | 0.0419 | -- | 0.352 | 20.4 | -- | -- | -- | -- |
| 88.31 | 0.44 | 7.37 | -0.377 | 0.199 | -- | -- | -- | 0.352 | 20.3 | -- | -- | -- | -- |
| 73.65 | 0.4 | 7.38 | -0.316 | -- | 0.718 | -- | -- | 0.283 | -- | 67 | 2745 | -- | -- |
| 71.99 | 0.395 | 7.37 | -- | 0.276 | 0.803 | -- | -- | 0.378 | 22 | 68.37 | 2636 | -- | -- |
| 90.51 | 0.445 | 7.36 | -0.379 | -- | -- | -- | -- | 0.35 | -- | -- | -- | -- | -- |
| 92.07 | 0.449 | 7.36 | -- | 0.201 | -- | -- | -- | 0.394 | 20.2 | -- | -- | -- | -- |
| 75.88 | 0.406 | 7.36 | -- | -- | 0.746 | -- | -- | 0.377 | -- | 68.03 | 2744 | -- | -- |
| 94.29 | 0.453 | 7.35 | -- | -- | -- | -- | -- | 0.392 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.11 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 2 | 66.11 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 3 | 66.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 4 | 66.28 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 5 | 67.17 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 6 | 67.22 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 7 |
| 7 | 67.25 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 15 | 67.50 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 16 | 67.54 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 20 | 67.62 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 22 | 67.64 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 24 | 67.69 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 6 |
| 26 | 67.71 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 12 |
| 27 | 67.71 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 12 |
| 28 | 67.75 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 12 |
| 31 | 67.82 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 36 | 67.84 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 7 | 6 |
| 38 | 67.85 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 39 | 67.86 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 5 | 8 |
| 44 | 67.90 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 47 | 67.97 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 75 | 68.16 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 76 | 68.16 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 95 | 68.26 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 8 |
| 97 | 68.29 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 105 | 68.35 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 108 | 68.36 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 12 |
| 111 | 68.38 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 6 |
| 132 | 68.49 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 148 | 68.56 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 4 |
| 159 | 68.63 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 192 | 68.77 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 6 |
| 193 | 68.77 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 9 |
| 196 | 68.79 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 210 | 68.86 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 11 |
| 215 | 68.88 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 255 | 69.02 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 271 | 69.07 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 273 | 69.07 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 288 | 69.12 | humidity | 60.0 | 1440 | > th | dose dependent | sin | 4 | NA |
| 293 | 69.13 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 303 | 69.16 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 347 | 69.30 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 22 | 15 |
| 348 | 69.30 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 20 | 17 |
| 366 | 69.33 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 5 | NA |
| 577 | 69.88 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 2 | NA |
| 578 | 69.88 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 2 | NA |
| 581 | 69.89 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 2 | NA |
| 583 | 69.89 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 584 | 69.89 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 12 |
| 609 | 69.95 | humidity | 80.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 612 | 69.95 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 614 | 69.95 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 623 | 69.98 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 625 | 69.98 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 19 | 18 |
| 634 | 70.00 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 648 | 70.04 | humidity | 80.0 | 1440 | > th | dose independent | sin | 4 | NA |
| 662 | 70.07 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 14 |
| 683 | 70.11 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 690 | 70.12 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 13 |
| 699 | 70.14 | wind | 9.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 790 | 70.30 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 791 | 70.31 | wind | 3.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 813 | 70.34 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 818 | 70.35 | wind | 3.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 893 | 70.48 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 938 | 70.56 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 942 | 70.56 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 3 |
| 955 | 70.59 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 987 | 70.63 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 995 | 70.64 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 9 | 4 |