Os04g0449000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochondrial substrate carrier family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0449000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Mitochondrial substrate carrier family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.81 | 0.307 | 7.72 | 0.289 | 0.111 | 1.01 | -0.989 | 2.32 | -0.0353 | 7.79 | 14.08 | 16 | -- | -- |
| 45.69 | 0.315 | 7.76 | -0.0263 | 0.0824 | 0.865 | -1.18 | -- | -0.129 | 6.27 | 18.66 | 16 | -- | -- |
| 45.13 | 0.313 | 7.72 | 0.289 | 0.172 | 0.967 | -- | 2.31 | -0.0349 | 8.48 | 14.92 | 93 | -- | -- |
| 48.81 | 0.325 | 7.76 | -0.044 | 0.101 | 0.879 | -- | -- | -0.125 | 8.59 | 18.6 | 17 | -- | -- |
| 46.34 | 0.317 | 7.72 | 0.253 | -- | 1.01 | -- | 2.2 | -0.0267 | -- | 13.77 | 52 | -- | -- |
| 58.03 | 0.357 | 7.73 | 0.134 | 0.323 | -- | 0.756 | -- | 0.0242 | 14.6 | -- | -- | -- | -- |
| 59.32 | 0.361 | 7.73 | 0.152 | 0.335 | -- | -- | -- | 0.0273 | 13.2 | -- | -- | -- | -- |
| 49.43 | 0.327 | 7.76 | -0.042 | -- | 0.891 | -- | -- | -0.123 | -- | 18.6 | 16 | -- | -- |
| 48.84 | 0.326 | 7.76 | -- | 0.105 | 0.877 | -- | -- | -0.115 | 8.79 | 18.6 | 17 | -- | -- |
| 66.25 | 0.38 | 7.73 | 0.139 | -- | -- | -- | -- | 0.0205 | -- | -- | -- | -- | -- |
| 59.94 | 0.362 | 7.73 | -- | 0.332 | -- | -- | -- | 0.0104 | 13.2 | -- | -- | -- | -- |
| 49.47 | 0.328 | 7.76 | -- | -- | 0.881 | -- | -- | -0.117 | -- | 18.6 | 16 | -- | -- |
| 66.76 | 0.381 | 7.73 | -- | -- | -- | -- | -- | 0.00503 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.82 | temperature | 30 | 90 | < th | dose dependent | rect. | 12 | 19 |
| 2 | 39.86 | temperature | 30 | 30 | < th | dose dependent | rect. | 12 | 21 |
| 54 | 41.41 | temperature | 15 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 76 | 41.72 | temperature | 25 | 270 | < th | dose independent | rect. | 12 | 17 |
| 87 | 41.80 | temperature | 15 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 162 | 42.40 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 203 | 42.77 | temperature | 25 | 30 | < th | dose dependent | sin | 14 | NA |
| 205 | 42.77 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 210 | 42.81 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 217 | 42.83 | temperature | 25 | 270 | < th | dose independent | sin | 15 | NA |
| 225 | 42.85 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 230 | 42.87 | temperature | 20 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 248 | 42.96 | temperature | 30 | 90 | < th | dose dependent | sin | 11 | NA |
| 250 | 42.96 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 252 | 42.97 | temperature | 30 | 270 | < th | dose dependent | sin | 13 | NA |
| 260 | 43.01 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 265 | 43.02 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 23 |
| 270 | 43.04 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 281 | 43.07 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 310 | 43.17 | temperature | 30 | 270 | < th | dose dependent | sin | 16 | NA |
| 319 | 43.20 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 321 | 43.21 | temperature | 30 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 331 | 43.26 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 368 | 43.39 | temperature | 20 | 90 | > th | dose dependent | rect. | 7 | 20 |
| 377 | 43.41 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 10 |
| 380 | 43.41 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 391 | 43.45 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 403 | 43.48 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 447 | 43.64 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 514 | 43.81 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 549 | 43.96 | temperature | 25 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 550 | 43.96 | temperature | 25 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 562 | 44.01 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 673 | 44.24 | temperature | 10 | 90 | > th | dose dependent | sin | 12 | NA |
| 689 | 44.27 | temperature | 30 | 720 | < th | dose dependent | rect. | 10 | 12 |
| 844 | 44.49 | temperature | 25 | 270 | > th | dose independent | rect. | 15 | 17 |
| 856 | 44.50 | temperature | 20 | 270 | > th | dose dependent | rect. | 15 | 19 |
| 966 | 44.69 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 12 |