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Os04g0438500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0157) R2 : 0.579
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.01 (0.0403) R2dC : 0.576 R2C : 0.577
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0423 (0.033) R2dN8 : 0.00197 R2N8 : 0.0024
σ : 0.296
deviance : 39.98
__
_____
C
peak time of C : 16.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
34.61 0.276 10.1 0.186 0.81 -0.211 -2.27 -3.74 -0.000358 16.1 1.461 666 -- --
37.13 0.286 10.2 0.0481 0.95 -0.301 0.911 -- -0.048 17.8 1.461 666 -- --
35.75 0.278 10.1 0.213 0.979 -0.0467 -- -2.17 0.00676 16 0.00405 961 -- --
37.51 0.287 10.2 0.0362 0.969 -0.306 -- -- -0.0586 17.7 0.00405 961 -- --
40.01 0.295 10.2 0.0509 -- -1.07 -- -1.08 -0.109 -- 5.991 570 -- --
39.09 0.293 10.2 0.0543 1.01 -- 0.549 -- -0.0387 16.4 -- -- -- --
39.88 0.296 10.2 0.0591 1.01 -- -- -- -0.0358 16.3 -- -- -- --
40.86 0.298 10.2 0.0328 -- -1.06 -- -- -0.0948 -- 6.75 555 -- --
37.54 0.287 10.2 -- 0.969 -0.308 -- -- -0.0628 17.7 0.00405 961 -- --
94.5 0.454 10.1 0.0191 -- -- -- -- -0.0625 -- -- -- -- --
39.98 0.296 10.2 -- 1.01 -- -- -- -0.0423 16.3 -- -- -- --
40.88 0.298 10.2 -- -- -1.06 -- -- -0.0984 -- 6.64 555 -- --
94.51 0.454 10.1 -- -- -- -- -- -0.0646 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 29.21 temperature 15.0 270 > th dose independent rect. 8 13
4 29.89 temperature 10.0 270 > th dose dependent rect. 12 12
7 30.62 radiation 20.0 270 < th dose independent rect. 16 11
11 30.81 humidity 50.0 270 > th dose independent rect. 16 11
12 30.82 radiation 30.0 270 < th dose dependent rect. 16 11
14 30.83 temperature 30.0 270 < th dose independent rect. 16 11
18 30.90 temperature 20.0 270 > th dose independent rect. 9 1
19 30.92 temperature 15.0 10 > th dose dependent rect. 14 12
37 31.32 temperature 20.0 10 > th dose independent rect. 9 5
38 31.34 temperature 20.0 90 > th dose independent rect. 9 4
45 31.46 wind 1.0 270 > th dose independent rect. 3 14
54 31.54 humidity 90.0 10 < th dose independent rect. 9 5
58 31.60 wind 1.0 30 > th dose independent rect. 12 21
61 31.65 temperature 15.0 270 > th dose independent rect. 1 11
64 31.71 radiation 30.0 90 < th dose dependent sin 13 NA
68 31.77 temperature 15.0 270 > th dose independent rect. 16 20
75 31.83 atmosphere 995.0 90 > th dose independent rect. 9 14
78 31.84 temperature 20.0 270 > th dose independent rect. 12 13
80 31.86 wind 9.0 270 < th dose independent rect. 3 13
81 31.87 temperature 10.0 270 > th dose independent rect. 16 11
84 31.87 temperature 10.0 270 > th dose independent rect. 3 13
85 31.87 atmosphere 1015.0 270 < th dose independent rect. 3 13
89 31.90 temperature 30.0 90 < th dose independent rect. 23 10
92 31.92 wind 9.0 90 < th dose independent rect. 23 10
93 31.92 temperature 10.0 90 > th dose independent rect. 23 10
94 31.92 humidity 50.0 90 > th dose independent rect. 23 10
96 31.92 atmosphere 995.0 90 > th dose independent rect. 23 10
100 31.93 temperature 10.0 30 > th dose dependent rect. 14 19
101 31.94 radiation 1.0 270 > th dose independent rect. 9 1
102 31.94 atmosphere 995.0 270 > th dose independent rect. 16 11
105 31.95 temperature 20.0 270 > th dose independent rect. 7 5
112 32.00 radiation 40.0 90 < th dose independent rect. 23 10
120 32.05 wind 9.0 270 < th dose independent rect. 16 11
126 32.06 temperature 10.0 720 > th dose dependent rect. 12 4
130 32.08 atmosphere 1015.0 1440 < th dose independent rect. 24 10
140 32.11 temperature 30.0 270 < th dose independent rect. 8 13
146 32.14 wind 9.0 90 < th dose independent rect. 9 14
162 32.20 wind 9.0 270 < th dose independent rect. 10 23
166 32.22 atmosphere 1015.0 1440 < th dose independent rect. 15 4
167 32.22 temperature 15.0 720 > th dose independent rect. 23 14
168 32.23 radiation 10.0 90 < th dose independent sin 13 NA
171 32.25 precipitation 0.1 1440 < th dose independent rect. 10 3
172 32.25 radiation 30.0 270 < th dose independent rect. 21 11
175 32.25 precipitation 0.1 1440 < th dose dependent rect. 10 3
178 32.26 temperature 15.0 270 > th dose independent rect. 10 23
179 32.27 temperature 15.0 1440 > th dose independent rect. 10 3
184 32.28 temperature 30.0 270 < th dose independent rect. 15 21
188 32.30 wind 9.0 270 < th dose independent rect. 21 11
189 32.30 temperature 10.0 270 > th dose independent rect. 21 11
190 32.30 temperature 30.0 270 < th dose independent rect. 21 11
191 32.30 humidity 50.0 270 > th dose independent rect. 21 11
193 32.30 atmosphere 995.0 270 > th dose independent rect. 21 11
203 32.31 atmosphere 1015.0 90 < th dose independent rect. 23 10
207 32.31 temperature 10.0 10 > th dose dependent rect. 9 5
219 32.35 atmosphere 1015.0 720 < th dose independent rect. 24 5
221 32.35 humidity 50.0 270 > th dose independent rect. 8 13
235 32.38 humidity 50.0 270 > th dose independent rect. 16 20
242 32.39 temperature 15.0 720 > th dose independent rect. 9 10
248 32.40 temperature 15.0 30 > th dose dependent rect. 9 3
254 32.43 temperature 15.0 720 > th dose independent rect. 24 5
259 32.43 radiation 40.0 270 < th dose dependent rect. 21 11
260 32.44 wind 7.0 270 < th dose independent rect. 9 1
271 32.46 temperature 15.0 720 > th dose independent rect. 24 20
285 32.49 atmosphere 1015.0 90 < th dose independent rect. 9 14
290 32.50 precipitation 0.1 90 < th dose independent rect. 23 10
291 32.50 precipitation 0.1 90 < th dose dependent rect. 23 10
292 32.51 wind 7.0 10 < th dose independent rect. 9 5
294 32.52 precipitation 0.1 270 < th dose independent rect. 9 1
295 32.52 precipitation 0.1 270 < th dose independent rect. 1 11
298 32.52 precipitation 0.1 270 < th dose dependent rect. 9 1
300 32.52 precipitation 0.1 270 < th dose dependent rect. 1 11
308 32.54 radiation 1.0 270 > th dose independent rect. 8 3
311 32.54 temperature 30.0 720 < th dose independent rect. 24 11
319 32.55 atmosphere 995.0 270 > th dose independent rect. 9 1
320 32.55 atmosphere 1015.0 270 < th dose independent rect. 9 1
321 32.55 radiation 10.0 30 > th dose independent rect. 9 5
322 32.55 atmosphere 995.0 270 > th dose independent rect. 7 14
348 32.59 humidity 50.0 270 > th dose independent rect. 9 1
361 32.60 humidity 70.0 90 > th dose independent sin 14 NA
372 32.62 temperature 10.0 43200 > th dose independent rect. 13 7
375 32.62 precipitation 0.1 270 < th dose independent rect. 3 13
376 32.62 wind 9.0 270 < th dose dependent rect. 9 1
377 32.62 temperature 10.0 270 > th dose dependent rect. 9 1
380 32.62 precipitation 0.1 270 < th dose dependent rect. 3 13
383 32.63 wind 1.0 270 > th dose independent rect. 12 4
384 32.63 temperature 10.0 43200 > th dose independent rect. 15 5
396 32.65 wind 7.0 90 < th dose independent rect. 9 4
411 32.68 precipitation 0.1 270 < th dose independent rect. 16 11
416 32.68 precipitation 0.1 270 < th dose dependent rect. 16 11
418 32.69 wind 1.0 270 > th dose independent rect. 9 1
429 32.71 atmosphere 1015.0 270 < th dose independent rect. 7 14
438 32.73 precipitation 0.1 270 < th dose independent rect. 7 14
442 32.73 precipitation 0.1 270 < th dose dependent rect. 7 14
445 32.74 wind 9.0 10 < th dose independent rect. 14 19
446 32.74 temperature 15.0 720 > th dose independent rect. 9 19
448 32.74 temperature 20.0 10 > th dose dependent rect. 14 6
466 32.77 wind 9.0 270 < th dose independent rect. 7 14
483 32.80 temperature 15.0 720 > th dose independent rect. 5 10
488 32.80 wind 9.0 90 < th dose independent rect. 13 20
503 32.82 wind 9.0 270 < th dose independent rect. 11 21
505 32.82 wind 9.0 90 < th dose dependent rect. 9 4
507 32.83 temperature 10.0 10 > th dose independent rect. 9 5
510 32.83 atmosphere 995.0 10 > th dose independent rect. 9 5
511 32.83 atmosphere 1015.0 10 < th dose independent rect. 9 5
512 32.83 precipitation 0.1 10 < th dose independent rect. 9 5
515 32.83 temperature 10.0 10 > th dose independent rect. 14 19
517 32.83 precipitation 0.1 10 < th dose dependent rect. 9 5
522 32.84 temperature 30.0 270 < th dose independent rect. 16 7
558 32.89 radiation 40.0 10 < th dose independent rect. 14 19
566 32.90 wind 9.0 270 < th dose independent rect. 12 13
571 32.91 radiation 40.0 30 < th dose independent rect. 12 21
581 32.92 temperature 10.0 1440 > th dose independent rect. 10 5
590 32.92 atmosphere 995.0 270 > th dose independent rect. 16 20
609 32.94 precipitation 0.1 90 < th dose independent rect. 13 20
611 32.94 temperature 10.0 90 > th dose dependent rect. 2 11
615 32.94 precipitation 0.1 90 < th dose dependent rect. 13 20
616 32.95 wind 1.0 270 > th dose independent rect. 16 11
632 32.96 wind 7.0 270 < th dose independent rect. 12 5
637 32.97 temperature 20.0 270 > th dose independent rect. 12 4
639 32.97 humidity 50.0 14400 > th dose independent rect. 19 11
644 32.97 atmosphere 1015.0 10 < th dose dependent rect. 14 19
659 32.99 atmosphere 1015.0 720 < th dose independent rect. 24 14
670 33.00 atmosphere 1015.0 720 < th dose independent rect. 24 20
674 33.00 wind 9.0 90 < th dose dependent rect. 9 14
688 33.02 precipitation 0.1 270 < th dose independent rect. 16 20
689 33.02 temperature 10.0 270 > th dose independent rect. 11 21
696 33.02 precipitation 0.1 270 < th dose dependent rect. 16 20
716 33.04 humidity 70.0 90 < th dose independent rect. 14 18
720 33.04 temperature 25.0 30 > th dose dependent rect. 14 19
722 33.05 humidity 50.0 270 > th dose independent rect. 8 3
728 33.06 wind 9.0 270 < th dose independent rect. 1 11
748 33.08 wind 1.0 90 > th dose independent rect. 23 10
755 33.09 precipitation 0.1 270 < th dose independent rect. 21 10
757 33.09 atmosphere 995.0 270 > th dose independent rect. 1 11
759 33.09 temperature 10.0 270 > th dose independent rect. 12 13
762 33.09 precipitation 0.1 270 < th dose dependent rect. 21 10
786 33.13 atmosphere 995.0 270 > th dose independent rect. 3 13
793 33.14 humidity 90.0 270 < th dose independent rect. 12 5
794 33.14 atmosphere 1005.0 270 > th dose independent rect. 16 11
802 33.15 wind 1.0 90 > th dose independent rect. 9 4
812 33.15 atmosphere 995.0 90 > th dose dependent rect. 17 11
817 33.16 radiation 1.0 270 > th dose independent rect. 12 5
819 33.16 wind 1.0 270 > th dose independent rect. 12 13
830 33.17 radiation 40.0 720 < th dose independent rect. 19 14
838 33.18 temperature 10.0 270 > th dose independent rect. 12 4
840 33.18 atmosphere 1015.0 270 < th dose independent rect. 12 4
842 33.18 radiation 20.0 4320 < th dose independent rect. 19 11
855 33.19 precipitation 0.1 270 < th dose independent rect. 12 4
867 33.19 precipitation 0.1 270 < th dose dependent rect. 12 4
869 33.19 humidity 50.0 90 > th dose dependent rect. 23 10
874 33.20 wind 1.0 10 > th dose independent rect. 9 5
883 33.21 temperature 30.0 270 < th dose independent sin 19 NA
893 33.21 atmosphere 1005.0 270 > th dose dependent rect. 17 3
894 33.21 humidity 50.0 270 > th dose dependent rect. 21 11
896 33.21 radiation 1.0 270 > th dose dependent rect. 12 20
921 33.24 temperature 30.0 720 < th dose independent rect. 9 2
923 33.24 humidity 70.0 90 < th dose independent rect. 14 6
936 33.24 wind 9.0 270 < th dose independent rect. 16 20
942 33.25 temperature 15.0 4320 > th dose independent rect. 12 1
968 33.27 humidity 60.0 720 > th dose independent rect. 19 14
971 33.27 temperature 15.0 90 > th dose dependent sin 17 NA
972 33.27 temperature 10.0 10 > th dose dependent rect. 2 12
980 33.28 radiation 1.0 270 > th dose independent rect. 5 7