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Os04g0436100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Phenylacetic acid degradation-related protein domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.2 (0.0168) R2 : 0.102
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.254 (0.0353) R2dN8 : 0.131 R2N8 : 0.102
σ : 0.316
deviance : 45.81
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
11.94 0.162 12.2 0.722 0.508 0.131 0.143 0.716 0.355 3.37 0.6492 7031 -- --
11.47 0.158 12.2 0.572 0.511 0.35 0.133 -- 0.363 3.42 0.9942 23784 -- --
11.73 0.16 12.2 0.696 0.511 0.123 -- 0.727 0.351 3.42 1.07 16856 -- --
11.36 0.157 12.2 0.529 0.52 0.312 -- -- 0.366 3.41 1.655 33130 -- --
26.3 0.239 12.2 0.667 -- 0.294 -- 0.0614 0.367 -- 1.267 18273 -- --
14.42 0.178 12.2 0.779 0.507 -- 0.161 -- 0.33 3.38 -- -- -- --
14.5 0.178 12.2 0.776 0.508 -- -- -- 0.329 3.4 -- -- -- --
26.27 0.239 12.2 0.66 -- 0.318 -- -- 0.37 -- 1.084 16417 -- --
15.32 0.182 12.2 -- 0.531 0.494 -- -- 0.369 3.4 1.5 47520 -- --
29.03 0.252 12.2 0.798 -- -- -- -- 0.342 -- -- -- -- --
30.38 0.258 12.2 -- 0.524 -- -- -- 0.242 3.4 -- -- -- --
31.19 0.26 12.2 -- -- 0.487 -- -- 0.378 -- 1.5 47520 -- --
45.81 0.316 12.2 -- -- -- -- -- 0.254 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 11.10 temperature 30.0 10 < th dose dependent sin 0 NA
9 11.22 temperature 10.0 30 > th dose dependent sin 1 NA
16 11.24 temperature 30.0 90 < th dose dependent rect. 5 12
19 11.26 precipitation 0.1 43200 > th dose dependent rect. 17 1
22 11.29 precipitation 0.1 43200 < th dose independent rect. 17 1
25 11.29 precipitation 0.1 43200 < th dose dependent rect. 17 1
26 11.30 precipitation 0.1 43200 > th dose independent rect. 17 1
34 11.34 temperature 30.0 90 < th dose dependent rect. 5 14
37 11.36 temperature 30.0 90 < th dose dependent rect. 5 16
48 11.44 temperature 30.0 270 < th dose dependent rect. 3 14
54 11.49 temperature 30.0 10 < th dose dependent rect. 6 10
64 11.55 temperature 30.0 10 < th dose dependent rect. 6 12
67 11.56 temperature 30.0 10 < th dose dependent rect. 6 15
95 11.65 wind 9.0 43200 > th dose dependent rect. 20 1
106 11.68 precipitation 0.1 4320 < th dose independent rect. 13 5
110 11.68 precipitation 0.1 14400 > th dose dependent rect. 13 5
111 11.68 precipitation 0.1 4320 < th dose dependent rect. 13 5
115 11.69 precipitation 0.1 4320 > th dose independent rect. 13 5
127 11.72 wind 9.0 43200 > th dose independent rect. 20 1
150 11.75 wind 9.0 43200 < th dose independent rect. 20 1
183 11.80 wind 7.0 43200 > th dose dependent rect. 17 4
215 11.84 wind 9.0 43200 > th dose independent rect. 17 4
217 11.84 radiation 1.0 43200 < th dose dependent rect. 22 5
236 11.86 wind 9.0 43200 < th dose independent rect. 17 4
259 11.87 temperature 30.0 10 < th dose dependent rect. 6 8
297 11.89 precipitation 0.1 4320 > th dose dependent rect. 3 15
321 11.91 precipitation 0.1 14400 > th dose dependent sin 19 NA
357 11.93 temperature 15.0 90 > th dose dependent rect. 8 11
426 11.97 humidity 80.0 10 > th dose dependent rect. 6 12
446 11.99 precipitation 0.1 14400 > th dose independent rect. 17 5
495 12.00 precipitation 0.1 14400 > th dose dependent rect. 20 22
544 12.03 humidity 80.0 10 > th dose dependent rect. 6 10
589 12.06 humidity 60.0 14400 > th dose independent rect. 17 2
612 12.07 precipitation 0.1 43200 > th dose dependent rect. 19 2
652 12.09 humidity 60.0 14400 < th dose independent rect. 17 1
654 12.09 humidity 60.0 14400 > th dose independent rect. 17 4
660 12.09 humidity 60.0 14400 > th dose independent rect. 17 15
661 12.09 humidity 60.0 14400 < th dose independent rect. 17 16
696 12.10 humidity 60.0 14400 < th dose dependent rect. 16 18
699 12.11 humidity 60.0 14400 < th dose independent rect. 16 3
717 12.11 humidity 50.0 14400 > th dose independent rect. 16 19
718 12.11 humidity 50.0 14400 < th dose independent rect. 15 19
760 12.13 humidity 50.0 14400 < th dose independent sin 11 NA
775 12.13 precipitation 0.1 14400 > th dose independent rect. 11 11
776 12.13 precipitation 0.1 14400 < th dose independent rect. 11 11
791 12.13 precipitation 0.1 14400 < th dose dependent rect. 11 11
826 12.14 humidity 80.0 10 > th dose dependent rect. 6 15
862 12.15 humidity 90.0 270 > th dose dependent rect. 7 12
881 12.16 atmosphere 1000.0 43200 > th dose independent rect. 22 1
883 12.16 atmosphere 1000.0 43200 < th dose independent rect. 22 1
920 12.16 temperature 20.0 10 > th dose dependent rect. 5 14
924 12.16 temperature 20.0 30 > th dose dependent rect. 3 16
946 12.17 humidity 70.0 14400 < th dose dependent rect. 17 2
969 12.17 humidity 70.0 14400 < th dose dependent rect. 17 15