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Os04g0429200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.57 (0.0166) R2 : 0.0364
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.145 (0.035) R2dN8 : 0.047 R2N8 : 0.0364
σ : 0.313
deviance : 45.01
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
30.82 0.261 8.59 -0.184 0.38 -0.323 -0.456 0.397 0.0947 21.3 1010 304 -- --
31.32 0.261 8.58 -0.148 0.379 -0.336 -0.519 -- 0.103 21.3 1010 304 -- --
31.5 0.261 8.59 -0.171 0.37 -0.322 -- 0.479 0.106 21.1 1010 300 -- --
32.24 0.264 8.58 -0.132 0.372 -0.344 -- -- 0.116 21.1 1010 297 -- --
38.75 0.29 8.57 -0.18 -- -0.372 -- 0.51 0.129 -- 1010 305 -- --
34.15 0.274 8.58 -0.112 0.401 -- -0.546 -- 0.136 21.5 -- -- -- --
35.24 0.278 8.58 -0.0913 0.405 -- -- -- 0.137 21.4 -- -- -- --
39.64 0.293 8.57 -0.138 -- -0.409 -- -- 0.138 -- 1010 305 -- --
32.69 0.266 8.58 -- 0.375 -0.329 -- -- 0.132 21.1 1010 296 -- --
44.8 0.313 8.57 -0.0892 -- -- -- -- 0.135 -- -- -- -- --
35.46 0.279 8.58 -- 0.405 -- -- -- 0.147 21.3 -- -- -- --
40.13 0.295 8.56 -- -- -0.395 -- -- 0.154 -- 1010 297 -- --
45.01 0.313 8.57 -- -- -- -- -- 0.145 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 29.60 humidity 50.0 90 > th dose independent rect. 22 14
2 29.67 atmosphere 995.0 90 > th dose dependent rect. 22 14
5 29.73 atmosphere 995.0 90 > th dose independent rect. 12 10
6 29.77 wind 1.0 30 > th dose independent rect. 12 10
8 29.79 atmosphere 1010.0 270 < th dose independent rect. 12 21
11 29.83 precipitation 0.1 90 < th dose independent rect. 22 14
12 29.83 precipitation 0.1 90 < th dose dependent rect. 22 14
13 29.86 humidity 80.0 270 > th dose independent rect. 20 4
17 29.89 atmosphere 1010.0 90 < th dose independent rect. 12 10
18 29.91 temperature 10.0 90 > th dose independent rect. 12 10
21 29.91 temperature 10.0 90 > th dose independent rect. 22 14
22 29.91 atmosphere 995.0 90 > th dose independent rect. 22 14
24 29.92 temperature 10.0 1440 > th dose independent rect. 13 10
27 29.92 wind 9.0 30 < th dose independent rect. 22 14
28 29.92 temperature 10.0 1440 > th dose independent rect. 23 14
31 29.92 atmosphere 995.0 1440 > th dose independent rect. 23 14
51 30.07 humidity 80.0 90 > th dose independent rect. 22 2
60 30.10 humidity 80.0 10 > th dose independent rect. 22 3
63 30.11 temperature 15.0 1440 > th dose independent rect. 23 3
64 30.11 atmosphere 995.0 90 > th dose dependent rect. 22 2
65 30.11 atmosphere 995.0 270 > th dose dependent rect. 19 5
66 30.11 radiation 20.0 10 < th dose dependent rect. 1 21
68 30.13 wind 9.0 90 < th dose independent rect. 12 10
71 30.14 precipitation 0.1 90 < th dose independent rect. 12 10
72 30.14 atmosphere 995.0 90 > th dose dependent rect. 12 10
73 30.14 precipitation 0.1 90 < th dose dependent rect. 12 10
76 30.15 atmosphere 995.0 10 > th dose dependent rect. 22 3
78 30.16 wind 5.0 270 < th dose independent rect. 19 5
87 30.20 radiation 20.0 43200 < th dose dependent rect. 23 3
91 30.22 wind 7.0 4320 < th dose dependent rect. 19 1
97 30.24 atmosphere 1010.0 270 < th dose independent rect. 23 21
106 30.27 wind 1.0 4320 > th dose dependent rect. 19 1
110 30.28 radiation 40.0 10 < th dose independent rect. 13 9
114 30.29 atmosphere 1010.0 270 < th dose independent rect. 12 8
120 30.31 humidity 50.0 10 > th dose independent rect. 12 10
129 30.33 radiation 40.0 90 < th dose independent rect. 12 10
141 30.35 temperature 30.0 30 < th dose dependent rect. 22 3
148 30.36 atmosphere 995.0 270 > th dose dependent rect. 19 17
151 30.37 humidity 50.0 270 > th dose independent rect. 20 16
157 30.38 atmosphere 1010.0 270 < th dose independent rect. 23 10
160 30.38 wind 1.0 90 > th dose dependent rect. 12 10
176 30.41 radiation 40.0 10 < th dose dependent rect. 13 9
178 30.42 temperature 15.0 270 > th dose independent rect. 12 8
179 30.42 precipitation 0.1 270 < th dose independent rect. 19 17
182 30.42 precipitation 0.1 270 < th dose dependent rect. 19 17
210 30.46 temperature 15.0 1440 > th dose independent rect. 17 6
211 30.46 temperature 15.0 10 > th dose independent rect. 12 23
222 30.48 temperature 15.0 270 > th dose independent rect. 12 19
233 30.50 precipitation 0.1 10 < th dose independent rect. 11 14
235 30.50 atmosphere 1000.0 30 > th dose dependent rect. 22 5
236 30.50 precipitation 0.1 10 < th dose dependent rect. 11 14
238 30.51 atmosphere 1000.0 270 > th dose independent rect. 12 7
245 30.51 radiation 10.0 10 < th dose independent rect. 1 21
255 30.53 wind 5.0 30 < th dose independent rect. 22 3
265 30.54 temperature 30.0 10 < th dose independent rect. 1 10
267 30.54 humidity 60.0 30 > th dose dependent rect. 22 3
268 30.54 atmosphere 995.0 270 > th dose dependent rect. 12 7
275 30.55 radiation 20.0 90 < th dose independent rect. 24 10
277 30.55 wind 9.0 10 < th dose independent rect. 11 14
283 30.55 wind 9.0 270 < th dose independent rect. 20 16
291 30.56 atmosphere 995.0 10 > th dose independent rect. 1 21
301 30.57 temperature 30.0 90 < th dose independent rect. 24 10
303 30.57 temperature 10.0 270 > th dose independent rect. 20 16
304 30.57 atmosphere 995.0 270 > th dose independent rect. 20 16
309 30.58 atmosphere 1000.0 10 > th dose independent rect. 22 3
319 30.58 temperature 15.0 90 > th dose independent rect. 24 22
325 30.58 humidity 50.0 30 > th dose dependent rect. 1 10
364 30.62 precipitation 0.1 270 < th dose independent rect. 12 7
372 30.62 precipitation 0.1 270 < th dose dependent rect. 12 7
374 30.62 radiation 20.0 10 < th dose dependent rect. 7 15
378 30.63 radiation 20.0 10 < th dose independent rect. 13 9
379 30.63 wind 9.0 10 < th dose independent rect. 1 10
388 30.64 temperature 10.0 10 > th dose independent rect. 1 10
390 30.64 humidity 50.0 10 > th dose independent rect. 1 10
391 30.64 atmosphere 995.0 10 > th dose independent rect. 1 10
392 30.64 atmosphere 1015.0 10 < th dose independent rect. 1 10
393 30.64 temperature 10.0 10 > th dose independent rect. 11 14
410 30.66 radiation 40.0 10 < th dose dependent rect. 1 10
412 30.67 atmosphere 1010.0 270 < th dose independent sin 20 NA
413 30.67 precipitation 0.1 10 < th dose independent rect. 22 3
418 30.67 precipitation 0.1 10 < th dose dependent rect. 22 3
421 30.68 wind 9.0 270 < th dose independent rect. 12 7
424 30.68 radiation 40.0 10 < th dose independent rect. 1 10
454 30.70 temperature 10.0 10 > th dose independent rect. 22 3
456 30.70 temperature 30.0 10 < th dose independent rect. 22 3
458 30.70 humidity 50.0 10 > th dose independent rect. 22 3
466 30.70 radiation 1.0 10 < th dose independent rect. 22 3
488 30.70 temperature 10.0 10 > th dose independent rect. 1 21
492 30.70 atmosphere 1015.0 10 < th dose independent rect. 1 21
497 30.70 radiation 1.0 10 < th dose dependent rect. 22 3
511 30.71 temperature 30.0 1440 < th dose independent rect. 23 3
515 30.71 humidity 50.0 1440 > th dose independent rect. 23 3
525 30.71 atmosphere 995.0 1440 > th dose independent rect. 23 3
526 30.71 radiation 1.0 1440 < th dose independent rect. 23 3
547 30.71 temperature 10.0 1440 > th dose independent rect. 2 21
551 30.71 atmosphere 1010.0 270 > th dose independent rect. 11 23
552 30.71 radiation 1.0 1440 < th dose dependent rect. 23 3
559 30.71 radiation 40.0 90 < th dose dependent rect. 24 10
571 30.72 atmosphere 1015.0 90 < th dose independent rect. 22 14
575 30.72 radiation 20.0 10 < th dose dependent sin 23 NA
606 30.74 temperature 10.0 1440 > th dose independent rect. 2 10
609 30.74 atmosphere 995.0 1440 > th dose independent rect. 2 10
611 30.74 temperature 10.0 1440 > th dose independent rect. 12 14
627 30.75 temperature 30.0 30 < th dose independent rect. 12 10
630 30.75 atmosphere 995.0 10 > th dose dependent rect. 11 14
632 30.75 radiation 40.0 10 < th dose dependent rect. 13 22
647 30.76 atmosphere 1000.0 270 > th dose independent rect. 19 5
667 30.76 radiation 20.0 10 < th dose dependent rect. 9 13
681 30.78 temperature 15.0 1440 > th dose independent rect. 21 5
684 30.78 atmosphere 1010.0 270 > th dose independent rect. 7 17
698 30.79 temperature 25.0 270 < th dose independent rect. 24 7
704 30.79 atmosphere 1010.0 270 > th dose independent rect. 19 15
719 30.80 humidity 50.0 270 > th dose independent rect. 8 16
721 30.80 wind 9.0 10 < th dose independent rect. 1 21
723 30.80 temperature 15.0 270 > th dose independent rect. 21 23
731 30.81 precipitation 0.1 30 < th dose independent rect. 1 10
752 30.81 precipitation 0.1 30 < th dose dependent rect. 1 10
753 30.81 radiation 20.0 10 < th dose dependent rect. 3 19
763 30.82 precipitation 0.1 270 < th dose independent rect. 8 16
770 30.82 wind 9.0 90 < th dose independent rect. 24 22
775 30.82 wind 9.0 270 < th dose dependent rect. 19 5
780 30.82 precipitation 0.1 270 < th dose dependent rect. 8 16
783 30.83 wind 1.0 30 > th dose independent rect. 22 3
790 30.83 wind 1.0 270 > th dose independent rect. 8 16
814 30.84 wind 9.0 10 < th dose dependent rect. 22 3
817 30.84 atmosphere 1005.0 30 > th dose dependent rect. 11 16
819 30.85 atmosphere 1010.0 270 > th dose independent sin 9 NA
828 30.85 radiation 10.0 10 < th dose independent rect. 8 14
849 30.86 atmosphere 1010.0 270 > th dose independent no NA NA
915 30.88 atmosphere 1010.0 270 < th dose independent sin 9 NA
930 30.88 wind 9.0 270 < th dose independent rect. 8 16
936 30.89 atmosphere 1010.0 270 > th dose independent sin 20 NA
937 30.89 atmosphere 1010.0 270 < th dose independent no NA NA
938 30.89 precipitation 0.1 270 < th dose independent rect. 19 5
943 30.89 wind 9.0 90 < th dose dependent rect. 22 2
944 30.89 precipitation 0.1 270 < th dose dependent rect. 19 5
952 30.90 wind 9.0 270 < th dose independent rect. 24 8
956 30.90 humidity 50.0 270 > th dose independent rect. 24 8
958 30.90 atmosphere 995.0 270 > th dose independent rect. 24 8
963 30.90 humidity 50.0 90 > th dose independent rect. 10 14
964 30.90 temperature 10.0 270 > th dose independent rect. 8 16
973 30.91 radiation 40.0 270 < th dose independent rect. 24 8
980 30.91 wind 1.0 30 > th dose independent rect. 1 21
988 30.92 wind 5.0 4320 > th dose independent rect. 19 1
990 30.92 wind 9.0 1440 < th dose independent rect. 23 3