Os04g0423100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : FAD dependent oxidoreductase family protein.
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Os04g0423100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : FAD dependent oxidoreductase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 178.76 | 0.628 | 2.88 | 0.0547 | 0.183 | 16.4 | -0.454 | 49.4 | 0.187 | 6.64 | 10.3 | 31 | 1.04 | -- |
| 179.17 | 0.623 | 2.87 | -0.0651 | 0.182 | 5.56 | -0.0249 | -- | 0.175 | 5.31 | 10.39 | 25 | 2.6 | -- |
| 179.03 | 0.623 | 2.88 | 0.0452 | 0.192 | 16.5 | -- | 49.7 | 0.191 | 5.42 | 10.25 | 28 | 1.15 | -- |
| 178.98 | 0.623 | 2.86 | -0.0811 | 0.193 | 5.68 | -- | -- | 0.185 | 5.45 | 10.4 | 28 | 2.1 | -- |
| 180.85 | 0.626 | 2.88 | 0.0264 | -- | 15.5 | -- | 45.4 | 0.191 | -- | 10.5 | 21 | 2.05 | -- |
| 210.23 | 0.68 | 2.86 | -0.109 | 0.163 | -- | -0.637 | -- | 0.166 | 7.92 | -- | -- | -- | -- |
| 211.06 | 0.68 | 2.86 | -0.129 | 0.187 | -- | -- | -- | 0.165 | 6.29 | -- | -- | -- | -- |
| 180.85 | 0.626 | 2.86 | -0.0724 | -- | 5.67 | -- | -- | 0.191 | -- | 10.41 | 28 | 2.09 | -- |
| 179.14 | 0.623 | 2.86 | -- | 0.189 | 5.71 | -- | -- | 0.195 | 5.43 | 10.43 | 28 | 2.07 | -- |
| 212.88 | 0.682 | 2.87 | -0.124 | -- | -- | -- | -- | 0.169 | -- | -- | -- | -- | -- |
| 211.51 | 0.68 | 2.86 | -- | 0.185 | -- | -- | -- | 0.179 | 6.32 | -- | -- | -- | -- |
| 180.99 | 0.627 | 2.86 | -- | -- | 5.69 | -- | -- | 0.199 | -- | 10.44 | 28 | 2.09 | -- |
| 213.28 | 0.682 | 2.86 | -- | -- | -- | -- | -- | 0.183 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 179.60 | radiation | 10.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 3 | 182.26 | wind | 9.0 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 40 | 185.40 | wind | 9.0 | 30 | > th | dose dependent | sin | 6 | NA |
| 42 | 185.92 | wind | 9.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 65 | 187.42 | wind | 9.0 | 30 | < th | dose independent | sin | 5 | NA |
| 149 | 189.86 | wind | 9.0 | 30 | > th | dose independent | sin | 5 | NA |
| 263 | 195.43 | wind | 1.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 301 | 195.60 | wind | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 330 | 196.26 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 3 |
| 409 | 198.15 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 6 |
| 451 | 198.60 | wind | 3.0 | 10 | < th | dose dependent | rect. | 2 | 3 |
| 452 | 198.62 | wind | 9.0 | 30 | < th | dose independent | no | NA | NA |
| 457 | 198.66 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 20 |
| 459 | 198.67 | wind | 1.0 | 30 | < th | dose independent | rect. | 7 | 22 |
| 468 | 198.71 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 532 | 198.90 | wind | 9.0 | 30 | > th | dose independent | no | NA | NA |
| 619 | 199.26 | wind | 1.0 | 10 | > th | dose independent | rect. | 13 | 22 |
| 623 | 199.32 | wind | 1.0 | 30 | < th | dose independent | rect. | 24 | 5 |
| 667 | 199.54 | wind | 1.0 | 10 | < th | dose independent | rect. | 12 | 17 |
| 679 | 199.58 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 682 | 199.61 | wind | 1.0 | 10 | > th | dose independent | rect. | 24 | 11 |
| 704 | 199.88 | wind | 1.0 | 30 | < th | dose dependent | rect. | 7 | 22 |
| 725 | 200.00 | wind | 1.0 | 10 | > th | dose independent | rect. | 20 | 15 |
| 726 | 200.01 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 733 | 200.08 | wind | 1.0 | 10 | > th | dose independent | sin | 5 | NA |
| 748 | 200.19 | wind | 1.0 | 10 | < th | dose independent | sin | 7 | NA |
| 862 | 200.56 | wind | 1.0 | 10 | > th | dose independent | no | NA | NA |
| 883 | 200.57 | wind | 1.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 885 | 200.60 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 1 |
| 890 | 200.60 | wind | 1.0 | 10 | < th | dose independent | rect. | 12 | 20 |
| 892 | 200.60 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 940 | 200.69 | temperature | 20.0 | 10 | > th | dose independent | rect. | 2 | 3 |