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Os04g0418000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13 (0.0107) R2 : 0.00168
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0197 (0.0225) R2dN8 : 0.00217 R2N8 : 0.00168
σ : 0.201
deviance : 18.59
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
12.54 0.166 13 -0.00145 0.373 0.221 -0.164 0.0633 0.0118 20.8 0.2807 97 -- --
12.55 0.165 13 -0.00817 0.374 0.222 -0.217 -- 0.0104 20.8 0.24 95 -- --
12.59 0.165 13 -0.00902 0.356 0.208 -- 0.132 0.0129 20.7 0.2388 98 -- --
12.71 0.166 13 -0.000848 0.358 0.207 -- -- 0.0105 20.7 0.2323 108 -- --
13.06 0.168 13 -0.00944 -- 0.405 -- -0.277 0.0028 -- 6.078 726 -- --
13.39 0.172 13 0.0174 0.317 -- -0.0505 -- 0.0281 18 -- -- -- --
13.4 0.171 13 0.0179 0.317 -- -- -- 0.0279 17.9 -- -- -- --
13.1 0.169 13 0.0164 -- 0.405 -- -- 0.0141 -- 5.84 726 -- --
12.71 0.166 13 -- 0.358 0.207 -- -- 0.0113 20.7 0.24 108 -- --
18.59 0.201 13 0.00848 -- -- -- -- 0.0207 -- -- -- -- --
13.4 0.171 13 -- 0.316 -- -- -- 0.0259 18 -- -- -- --
13.1 0.169 13 -- -- 0.403 -- -- 0.00626 -- 6.07 726 -- --
18.59 0.201 13 -- -- -- -- -- 0.0197 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 11.28 wind 1.0 10 > th dose independent rect. 4 1
2 11.44 temperature 25.0 90 > th dose dependent rect. 4 1
3 11.45 temperature 25.0 10 > th dose independent rect. 1 4
4 11.45 temperature 25.0 10 > th dose dependent rect. 4 1
6 11.46 temperature 25.0 90 > th dose independent rect. 4 1
8 11.46 wind 1.0 30 > th dose dependent rect. 4 1
9 11.47 temperature 25.0 10 > th dose independent rect. 4 1
14 11.51 humidity 90.0 10 < th dose independent rect. 4 1
25 11.58 temperature 25.0 10 > th dose dependent rect. 2 3
31 11.64 atmosphere 1000.0 10 > th dose independent rect. 5 23
40 11.68 humidity 90.0 90 < th dose dependent rect. 4 1
45 11.71 atmosphere 1005.0 10 > th dose dependent rect. 4 1
53 11.80 wind 3.0 30 < th dose independent rect. 4 1
54 11.80 wind 7.0 1440 < th dose independent rect. 5 1
57 11.80 temperature 10.0 1440 > th dose independent rect. 5 1
60 11.80 temperature 30.0 1440 < th dose independent rect. 5 1
64 11.80 humidity 50.0 1440 > th dose independent rect. 5 1
73 11.80 atmosphere 995.0 1440 > th dose independent rect. 5 1
74 11.80 atmosphere 1015.0 1440 < th dose independent rect. 5 1
75 11.80 radiation 20.0 1440 < th dose independent rect. 5 1
84 11.80 precipitation 0.1 30 < th dose independent rect. 4 1
85 11.80 temperature 10.0 1440 > th dose independent rect. 6 23
90 11.80 atmosphere 995.0 30 > th dose dependent rect. 4 1
92 11.80 precipitation 0.1 30 < th dose dependent rect. 4 1
97 11.81 temperature 10.0 30 > th dose independent rect. 4 1
99 11.81 temperature 30.0 30 < th dose independent rect. 4 1
100 11.81 humidity 50.0 30 > th dose independent rect. 4 1
104 11.81 atmosphere 995.0 30 > th dose independent rect. 4 1
107 11.81 atmosphere 1010.0 30 < th dose independent rect. 4 1
109 11.81 radiation 1.0 30 < th dose independent rect. 4 1
114 11.81 temperature 10.0 30 > th dose independent rect. 5 23
115 11.81 wind 3.0 30 < th dose dependent rect. 4 1
119 11.81 humidity 50.0 30 > th dose dependent rect. 4 1
123 11.81 atmosphere 1015.0 30 < th dose dependent rect. 4 1
124 11.81 radiation 1.0 30 < th dose dependent rect. 4 1
160 11.84 temperature 30.0 30 < th dose dependent rect. 4 1
161 11.84 humidity 90.0 10 < th dose dependent rect. 4 1
188 12.10 wind 1.0 30 > th dose independent rect. 5 23
189 12.10 wind 9.0 30 < th dose independent rect. 5 23
190 12.10 precipitation 0.1 30 < th dose independent rect. 5 23
191 12.10 precipitation 0.1 30 < th dose dependent rect. 5 23
197 12.16 humidity 80.0 720 < th dose independent rect. 12 5
198 12.16 humidity 50.0 30 > th dose independent rect. 5 23
203 12.18 temperature 30.0 30 < th dose independent rect. 5 23
206 12.20 temperature 10.0 720 > th dose dependent rect. 24 5
207 12.21 temperature 25.0 270 > th dose independent rect. 1 1
212 12.23 atmosphere 1000.0 90 > th dose independent rect. 5 13
220 12.27 atmosphere 1000.0 90 > th dose independent rect. 5 10
228 12.29 temperature 30.0 90 < th dose independent rect. 5 10
233 12.30 atmosphere 995.0 90 > th dose dependent rect. 5 13
234 12.32 wind 7.0 720 < th dose independent rect. 17 18
241 12.33 radiation 10.0 720 < th dose independent rect. 15 14
248 12.34 temperature 25.0 270 > th dose dependent rect. 1 1
252 12.35 radiation 20.0 43200 < th dose independent rect. 20 10
259 12.36 radiation 10.0 720 < th dose independent rect. 15 5
263 12.37 temperature 15.0 14400 > th dose independent rect. 2 1
270 12.38 temperature 15.0 14400 > th dose independent rect. 24 1
278 12.39 temperature 15.0 14400 > th dose independent rect. 24 3
279 12.39 temperature 15.0 14400 < th dose independent rect. 24 3
284 12.40 temperature 15.0 14400 < th dose independent rect. 2 1
290 12.40 wind 1.0 10 > th dose independent rect. 2 3
292 12.40 temperature 25.0 4320 < th dose independent rect. 19 10
295 12.40 atmosphere 1000.0 90 > th dose independent rect. 5 18
309 12.41 wind 1.0 10 > th dose independent rect. 10 19
315 12.41 radiation 40.0 90 < th dose dependent rect. 10 19
319 12.42 temperature 25.0 4320 > th dose independent rect. 19 10
323 12.42 wind 7.0 720 < th dose independent rect. 17 12
325 12.42 temperature 10.0 270 > th dose dependent rect. 24 12
330 12.43 temperature 15.0 720 > th dose independent rect. 11 6
335 12.43 humidity 50.0 720 > th dose independent rect. 17 18
336 12.43 wind 1.0 43200 < th dose dependent rect. 13 1
340 12.43 radiation 40.0 720 < th dose dependent rect. 15 14
341 12.43 radiation 10.0 720 < th dose dependent rect. 13 16
342 12.43 radiation 10.0 720 < th dose dependent rect. 11 18
356 12.45 wind 1.0 43200 < th dose independent rect. 13 1
362 12.45 radiation 20.0 43200 < th dose independent rect. 24 6
372 12.45 wind 9.0 720 < th dose independent rect. 8 21
373 12.45 humidity 80.0 43200 > th dose dependent rect. 22 1
378 12.45 humidity 50.0 90 > th dose dependent rect. 15 14
379 12.45 radiation 20.0 720 < th dose dependent rect. 15 14
384 12.46 radiation 40.0 43200 > th dose independent rect. 7 1
417 12.46 radiation 40.0 43200 > th dose dependent rect. 7 1
428 12.46 humidity 50.0 90 > th dose dependent rect. 17 12
436 12.46 atmosphere 995.0 90 > th dose dependent rect. 5 18
452 12.47 radiation 30.0 30 < th dose independent rect. 10 19
458 12.47 humidity 80.0 43200 > th dose dependent rect. 21 3
459 12.47 atmosphere 995.0 720 > th dose dependent rect. 5 3
461 12.47 radiation 1.0 720 < th dose dependent rect. 5 11
465 12.47 humidity 50.0 90 > th dose dependent rect. 10 19
467 12.47 radiation 1.0 720 < th dose dependent rect. 20 20
471 12.48 wind 7.0 720 < th dose independent rect. 17 3
475 12.48 wind 7.0 720 < th dose independent rect. 23 6
477 12.48 precipitation 0.1 720 < th dose independent rect. 11 6
485 12.48 radiation 20.0 43200 < th dose independent rect. 22 8
488 12.48 radiation 1.0 14400 > th dose independent rect. 7 9
489 12.48 radiation 1.0 14400 < th dose independent rect. 7 9
497 12.48 radiation 1.0 720 < th dose dependent rect. 5 4
500 12.48 precipitation 0.1 720 < th dose dependent rect. 11 6
506 12.49 wind 1.0 43200 > th dose independent rect. 13 1
510 12.49 temperature 25.0 1440 > th dose independent rect. 3 2
513 12.49 atmosphere 1000.0 720 > th dose independent rect. 5 3
520 12.49 precipitation 0.1 720 < th dose independent rect. 23 6
529 12.49 wind 9.0 720 < th dose independent rect. 13 16
530 12.49 temperature 15.0 43200 < th dose dependent rect. 22 1
531 12.49 wind 1.0 14400 < th dose dependent rect. 1 2
534 12.49 humidity 80.0 43200 > th dose dependent rect. 20 5
537 12.49 precipitation 0.1 720 < th dose dependent rect. 23 6
545 12.50 humidity 90.0 43200 > th dose independent rect. 24 1
555 12.50 wind 7.0 720 < th dose independent rect. 17 10
566 12.50 wind 9.0 720 < th dose independent rect. 23 23
573 12.50 humidity 80.0 43200 > th dose dependent rect. 18 8
579 12.50 radiation 1.0 90 < th dose dependent rect. 13 16
582 12.50 humidity 70.0 90 > th dose dependent rect. 10 19
609 12.51 radiation 1.0 720 < th dose independent rect. 20 20
624 12.51 radiation 20.0 720 < th dose dependent rect. 15 5
630 12.51 radiation 1.0 90 < th dose dependent rect. 15 14
638 12.52 humidity 90.0 43200 < th dose independent rect. 24 1
640 12.52 temperature 25.0 1440 < th dose independent rect. 3 2
642 12.52 humidity 90.0 14400 < th dose independent rect. 4 2
652 12.52 radiation 1.0 720 > th dose independent rect. 11 6
692 12.52 atmosphere 995.0 10 > th dose dependent rect. 5 22
695 12.53 temperature 15.0 14400 < th dose independent sin 13 NA
698 12.53 temperature 25.0 4320 > th dose independent rect. 19 1
699 12.53 temperature 25.0 4320 < th dose independent rect. 19 1
724 12.53 atmosphere 1000.0 90 > th dose independent rect. 5 16
733 12.53 humidity 80.0 43200 < th dose dependent rect. 7 1
745 12.54 temperature 15.0 14400 > th dose independent sin 14 NA
748 12.54 temperature 15.0 14400 < th dose independent sin 11 NA
755 12.54 temperature 25.0 4320 < th dose independent rect. 23 5
782 12.54 radiation 1.0 90 < th dose independent rect. 13 16
848 12.55 temperature 25.0 720 < th dose independent rect. 22 10
849 12.55 radiation 1.0 720 < th dose independent rect. 5 10
866 12.55 radiation 1.0 90 < th dose independent rect. 15 14
871 12.55 temperature 15.0 14400 < th dose independent rect. 24 15
888 12.55 humidity 80.0 720 > th dose independent rect. 24 20
894 12.55 radiation 1.0 90 > th dose independent rect. 11 23
895 12.55 humidity 80.0 43200 > th dose dependent sin 14 NA
896 12.55 radiation 30.0 43200 > th dose dependent rect. 16 1
924 12.55 radiation 1.0 14400 < th dose dependent rect. 7 10
928 12.55 temperature 20.0 270 > th dose dependent rect. 23 12
947 12.56 temperature 15.0 43200 < th dose independent rect. 11 1
951 12.56 radiation 1.0 720 < th dose independent rect. 5 3
952 12.56 radiation 40.0 43200 < th dose independent rect. 16 3
953 12.56 radiation 10.0 720 < th dose independent rect. 17 3
976 12.56 temperature 15.0 14400 < th dose independent rect. 24 12