Os04g0412200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ferredoxin I.
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Os04g0412200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ferredoxin I.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.21 | 0.477 | 11.6 | -0.0626 | 2.41 | -0.924 | -1.05 | -1.22 | -0.386 | 22.6 | 63.77 | 1278 | -- | -- |
| 105.38 | 0.478 | 11.6 | -0.142 | 2.4 | -0.977 | -0.915 | -- | -0.402 | 22.6 | 63.01 | 1264 | -- | -- |
| 107.21 | 0.482 | 11.6 | -0.0674 | 2.51 | -0.875 | -- | -1.04 | -0.385 | 22.7 | 62.48 | 1398 | -- | -- |
| 108.74 | 0.486 | 11.6 | -0.166 | 2.41 | -0.941 | -- | -- | -0.397 | 22.6 | 62.24 | 1267 | -- | -- |
| 280.03 | 0.779 | 11.5 | 1.87e-05 | -- | -3.08 | -- | 0.056 | -0.569 | -- | 68.17 | 891 | -- | -- |
| 123.33 | 0.521 | 11.5 | -0.173 | 2.52 | -- | -0.78 | -- | -0.324 | 22.8 | -- | -- | -- | -- |
| 125.87 | 0.525 | 11.5 | -0.142 | 2.53 | -- | -- | -- | -0.322 | 22.8 | -- | -- | -- | -- |
| 279.64 | 0.779 | 11.5 | -0.109 | -- | -3.09 | -- | -- | -0.573 | -- | 67.7 | 889 | -- | -- |
| 109.38 | 0.487 | 11.6 | -- | 2.4 | -0.953 | -- | -- | -0.392 | 22.6 | 63 | 1261 | -- | -- |
| 520.52 | 1.07 | 11.5 | -0.0912 | -- | -- | -- | -- | -0.307 | -- | -- | -- | -- | -- |
| 126.4 | 0.526 | 11.5 | -- | 2.52 | -- | -- | -- | -0.306 | 22.8 | -- | -- | -- | -- |
| 279.95 | 0.779 | 11.5 | -- | -- | -3.09 | -- | -- | -0.564 | -- | 68 | 889 | -- | -- |
| 520.74 | 1.07 | 11.5 | -- | -- | -- | -- | -- | -0.297 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 96.75 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 2 | 97.01 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 3 | 97.01 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 4 | 97.51 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 5 | 98.62 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 2 | 2 |
| 6 | 98.73 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 8 | 98.97 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 11 | 99.15 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 17 | 99.44 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 19 | 99.56 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 20 | 99.62 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 23 | 99.65 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 24 | 99.66 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 2 | 15 |
| 27 | 99.68 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 28 | 99.69 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 11 |
| 29 | 99.69 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 11 |
| 36 | 99.79 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 2 | 15 |
| 44 | 99.86 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 46 | 99.88 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 53 | 99.97 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 56 | 99.99 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 63 | 100.08 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 10 |
| 71 | 100.14 | humidity | 80.0 | 1440 | > th | dose independent | sin | 1 | NA |
| 74 | 100.15 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 82 | 100.22 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 10 |
| 93 | 100.30 | humidity | 80.0 | 1440 | < th | dose independent | sin | 2 | NA |
| 96 | 100.34 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 7 |
| 99 | 100.36 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 2 | 2 |
| 113 | 100.48 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 8 |
| 125 | 100.57 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 128 | 100.58 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 5 |
| 152 | 100.71 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 157 | 100.73 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 164 | 100.76 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 170 | 100.79 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 5 |
| 177 | 100.83 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 16 |
| 227 | 101.12 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 12 |
| 230 | 101.13 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 233 | 101.16 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 234 | 101.16 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 236 | 101.18 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 249 | 101.23 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 6 |
| 255 | 101.26 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 23 | 18 |
| 259 | 101.26 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 23 | 18 |
| 263 | 101.28 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 265 | 101.28 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 271 | 101.31 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 277 | 101.33 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 280 | 101.33 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 297 | 101.39 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 23 | 18 |
| 299 | 101.40 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 300 | 101.40 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 304 | 101.42 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 333 | 101.49 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 5 |
| 348 | 101.56 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 379 | 101.65 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 395 | 101.70 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 400 | 101.71 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 14 |
| 410 | 101.74 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 14 |
| 411 | 101.74 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 14 |
| 417 | 101.76 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 426 | 101.80 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 21 | NA |
| 432 | 101.82 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 508 | 102.01 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 17 |
| 512 | 102.01 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 8 |
| 523 | 102.03 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 23 | 18 |
| 533 | 102.05 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 556 | 102.09 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 559 | 102.10 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 1 | NA |
| 566 | 102.11 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 1 | NA |
| 567 | 102.11 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 1 | NA |
| 577 | 102.14 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 593 | 102.17 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 598 | 102.18 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 11 |
| 602 | 102.18 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 10 | 7 |
| 610 | 102.19 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 622 | 102.21 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 670 | 102.29 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 932 | 102.66 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 6 |
| 973 | 102.71 | humidity | 80.0 | 14400 | > th | dose independent | sin | 22 | NA |