Os04g0412000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Esterase/lipase/thioesterase domain containing protein.
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Os04g0412000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Esterase/lipase/thioesterase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 90.85 | 0.448 | 10.9 | -0.371 | 2.53 | -1.05 | -0.131 | 0.633 | 0.256 | 23.8 | 19.2 | 1392 | -- | -- |
| 91.41 | 0.445 | 10.9 | -0.286 | 2.52 | -1.14 | -0.0874 | -- | 0.287 | 23.8 | 19.1 | 1391 | -- | -- |
| 90.93 | 0.444 | 10.9 | -0.368 | 2.53 | -1.05 | -- | 0.648 | 0.256 | 23.8 | 19.16 | 1391 | -- | -- |
| 91.38 | 0.445 | 10.9 | -0.3 | 2.53 | -1.21 | -- | -- | 0.271 | 23.8 | 19 | 1398 | -- | -- |
| 457.1 | 0.996 | 10.9 | -0.324 | -- | -1.4 | -- | -0.0935 | 0.362 | -- | 19.5 | 907 | -- | -- |
| 110.9 | 0.494 | 10.9 | 0.116 | 2.55 | -- | -0.144 | -- | 0.456 | 23.9 | -- | -- | -- | -- |
| 110.99 | 0.493 | 10.9 | 0.122 | 2.55 | -- | -- | -- | 0.457 | 23.9 | -- | -- | -- | -- |
| 452.57 | 0.991 | 10.9 | -0.483 | -- | -1.81 | -- | -- | 0.208 | -- | 19.4 | 909 | -- | -- |
| 93.44 | 0.45 | 10.9 | -- | 2.52 | -1.16 | -- | -- | 0.299 | 23.8 | 18.8 | 1390 | -- | -- |
| 520.15 | 1.07 | 10.8 | 0.198 | -- | -- | -- | -- | 0.49 | -- | -- | -- | -- | -- |
| 111.38 | 0.494 | 10.9 | -- | 2.55 | -- | -- | -- | 0.443 | 23.9 | -- | -- | -- | -- |
| 455.88 | 0.994 | 10.9 | -- | -- | -2.1 | -- | -- | 0.296 | -- | 18.3 | 888 | -- | -- |
| 521.18 | 1.07 | 10.8 | -- | -- | -- | -- | -- | 0.468 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 84.65 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 9 |
| 5 | 88.41 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 24 | 19 |
| 6 | 88.45 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 7 | 88.62 | temperature | 20.0 | 30 | > th | dose independent | rect. | 12 | 18 |
| 8 | 88.66 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 19 |
| 9 | 88.74 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 10 | 88.75 | temperature | 20.0 | 30 | > th | dose independent | rect. | 16 | 14 |
| 12 | 88.79 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 14 | 88.82 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 23 | 6 |
| 18 | 88.96 | radiation | 1.0 | 90 | < th | dose dependent | sin | 1 | NA |
| 24 | 89.01 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 1 | 13 |
| 26 | 89.02 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 6 | 21 |
| 29 | 89.11 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 24 | 15 |
| 33 | 89.18 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 15 |
| 67 | 89.62 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 24 | 8 |
| 73 | 89.66 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 7 |
| 93 | 89.84 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 21 |
| 106 | 89.94 | radiation | 1.0 | 90 | > th | dose independent | sin | 1 | NA |
| 107 | 89.94 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 113 | 89.98 | radiation | 1.0 | 90 | < th | dose independent | sin | 1 | NA |
| 116 | 89.98 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 6 | 18 |
| 127 | 90.03 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 19 |
| 134 | 90.05 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 18 |
| 143 | 90.10 | wind | 1.0 | 270 | > th | dose independent | rect. | 20 | 4 |
| 155 | 90.17 | temperature | 20.0 | 1440 | < th | dose dependent | sin | 11 | NA |
| 165 | 90.23 | wind | 7.0 | 270 | < th | dose independent | rect. | 20 | 4 |
| 177 | 90.30 | temperature | 20.0 | 270 | > th | dose independent | rect. | 24 | 20 |
| 181 | 90.31 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 4 | 21 |
| 188 | 90.33 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 20 |
| 199 | 90.40 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 201 | 90.41 | wind | 7.0 | 270 | < th | dose independent | rect. | 20 | 13 |
| 220 | 90.51 | temperature | 20.0 | 30 | > th | dose independent | rect. | 12 | 10 |
| 233 | 90.59 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 16 | 14 |
| 252 | 90.72 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 254 | 90.72 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 255 | 90.72 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 258 | 90.72 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 259 | 90.72 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 261 | 90.72 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 267 | 90.72 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 21 |
| 268 | 90.72 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 274 | 90.74 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 281 | 90.76 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 21 | 3 |
| 292 | 90.82 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 21 |
| 293 | 90.82 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 21 |
| 305 | 90.90 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 3 |
| 306 | 90.90 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 315 | 90.95 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 20 | 4 |
| 322 | 90.99 | temperature | 30.0 | 270 | < th | dose independent | rect. | 20 | 14 |
| 326 | 91.01 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 3 |
| 327 | 91.01 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 338 | 91.06 | temperature | 15.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 343 | 91.07 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 344 | 91.07 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 347 | 91.07 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 348 | 91.07 | radiation | 20.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 351 | 91.07 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 18 |
| 355 | 91.08 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 399 | 91.18 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 24 | 20 |
| 406 | 91.21 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 19 |
| 408 | 91.21 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 19 |
| 410 | 91.22 | temperature | 15.0 | 270 | > th | dose independent | rect. | 23 | 22 |
| 419 | 91.25 | wind | 7.0 | 270 | < th | dose independent | rect. | 21 | 2 |
| 420 | 91.25 | temperature | 10.0 | 270 | > th | dose independent | rect. | 20 | 4 |
| 421 | 91.25 | temperature | 30.0 | 270 | < th | dose independent | rect. | 20 | 4 |
| 422 | 91.25 | humidity | 50.0 | 270 | > th | dose independent | rect. | 20 | 4 |
| 425 | 91.25 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 20 | 4 |
| 426 | 91.25 | radiation | 1.0 | 270 | < th | dose independent | rect. | 20 | 4 |
| 433 | 91.25 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 20 | 4 |
| 437 | 91.25 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 2 | 19 |
| 446 | 91.28 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 6 |
| 448 | 91.28 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 494 | 91.46 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 1 | 20 |
| 500 | 91.50 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 18 |
| 508 | 91.53 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 3 |
| 518 | 91.55 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 1 | 5 |
| 523 | 91.57 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 20 | 4 |
| 525 | 91.57 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 20 | 4 |
| 569 | 91.65 | radiation | 1.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 596 | 91.69 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 24 | 20 |
| 674 | 91.82 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 693 | 91.86 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 3 |
| 717 | 91.90 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 20 |
| 721 | 91.90 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 20 |
| 725 | 91.91 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 2 | 4 |
| 758 | 91.95 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 16 | 14 |
| 766 | 91.96 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 1 | 22 |
| 822 | 92.04 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 20 | 4 |
| 837 | 92.08 | temperature | 20.0 | 1440 | < th | dose dependent | no | NA | NA |
| 853 | 92.12 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 862 | 92.15 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 20 |
| 872 | 92.16 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 16 | 14 |
| 895 | 92.20 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 20 |
| 921 | 92.22 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 18 |
| 986 | 92.34 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 3 | 19 |
| 992 | 92.35 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 18 |