Os04g0401000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heavy metal transport/detoxification protein domain containing protein.
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Os04g0401000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heavy metal transport/detoxification protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1209.55 | 1.63 | 12 | -12 | 0.666 | 5.24 | -2.76 | -8.98 | -2.61 | 18.6 | 21.65 | 1249 | 15.1 | -- |
| 1261.07 | 1.65 | 11.8 | -9.89 | 0.693 | 5.08 | -2.93 | -- | -2.03 | 19.4 | 19.32 | 1284 | 15.4 | -- |
| 1228.39 | 1.63 | 12 | -12 | 0.674 | 5.33 | -- | -8.92 | -2.62 | 18.1 | 21.47 | 1238 | 14.9 | -- |
| 1281.94 | 1.67 | 11.8 | -9.79 | 0.766 | 5.44 | -- | -- | -2.03 | 17 | 18.86 | 1228 | 14.8 | -- |
| 1239.32 | 1.64 | 12 | -11.9 | -- | 5.3 | -- | -8.77 | -2.62 | -- | 21.37 | 1230 | 17.1 | -- |
| 1894.34 | 2.04 | 11.6 | -8.19 | 1.1 | -- | -1.66 | -- | -1.21 | 22.4 | -- | -- | -- | -- |
| 1903.9 | 2.04 | 11.6 | -8.13 | 1.11 | -- | -- | -- | -1.21 | 22.9 | -- | -- | -- | -- |
| 1297.2 | 1.68 | 11.7 | -9.8 | -- | 5.16 | -- | -- | -2.06 | -- | 19.3 | 1245 | 17.1 | -- |
| 3460.21 | 2.74 | 11.2 | -- | 0.7 | 2.08 | -- | -- | 0.083 | 19.4 | 28.71 | 1230 | 17.7 | -- |
| 1980.03 | 2.08 | 11.5 | -8.11 | -- | -- | -- | -- | -1.2 | -- | -- | -- | -- | -- |
| 3646.51 | 2.82 | 11.4 | -- | 1.05 | -- | -- | -- | -0.306 | 22.4 | -- | -- | -- | -- |
| 3437.84 | 2.73 | 11.3 | -- | -- | 3.29 | -- | -- | -0.148 | -- | 25.7 | 701 | 6.32 | -- |
| 3713.77 | 2.84 | 11.3 | -- | -- | -- | -- | -- | -0.304 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 1150.76 | wind | 3 | 43200 | > th | dose dependent | rect. | 3 | 13 |
| 4 | 1153.65 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 8 | 1156.18 | wind | 3 | 43200 | > th | dose dependent | sin | 2 | NA |
| 10 | 1157.58 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 21 |
| 13 | 1158.13 | wind | 3 | 43200 | > th | dose dependent | rect. | 18 | 22 |
| 23 | 1161.11 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 22 |
| 30 | 1162.01 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 22 |
| 34 | 1162.75 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 41 | 1163.59 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 22 |
| 42 | 1164.15 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 49 | 1165.03 | wind | 5 | 43200 | < th | dose independent | rect. | 19 | 23 |
| 55 | 1165.23 | wind | 5 | 43200 | > th | dose dependent | rect. | 23 | 23 |
| 79 | 1166.76 | wind | 5 | 43200 | > th | dose dependent | rect. | 4 | 23 |
| 80 | 1166.78 | wind | 5 | 43200 | > th | dose dependent | no | NA | NA |
| 81 | 1166.79 | wind | 5 | 43200 | > th | dose independent | rect. | 1 | 21 |
| 95 | 1167.15 | wind | 5 | 43200 | < th | dose independent | rect. | 1 | 22 |
| 104 | 1167.41 | wind | 5 | 43200 | > th | dose independent | rect. | 19 | 23 |
| 141 | 1168.86 | wind | 5 | 43200 | < th | dose independent | no | NA | NA |
| 146 | 1169.24 | wind | 5 | 43200 | > th | dose independent | no | NA | NA |
| 148 | 1169.29 | wind | 5 | 43200 | < th | dose independent | rect. | 2 | 15 |
| 185 | 1170.72 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 23 |
| 188 | 1170.77 | wind | 5 | 43200 | < th | dose independent | sin | 2 | NA |
| 195 | 1171.02 | wind | 5 | 43200 | < th | dose independent | rect. | 4 | 12 |
| 203 | 1171.38 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 205 | 1171.43 | wind | 5 | 43200 | > th | dose independent | rect. | 2 | 15 |
| 206 | 1171.46 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 10 |
| 219 | 1171.73 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 23 |
| 227 | 1172.03 | wind | 5 | 43200 | > th | dose independent | rect. | 4 | 12 |
| 231 | 1172.16 | wind | 5 | 43200 | > th | dose independent | rect. | 1 | 17 |
| 237 | 1172.42 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 23 |
| 259 | 1172.92 | wind | 5 | 43200 | > th | dose independent | sin | 2 | NA |
| 369 | 1177.11 | wind | 9 | 43200 | < th | dose dependent | rect. | 3 | 12 |
| 419 | 1178.82 | humidity | 80 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 457 | 1179.93 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 467 | 1180.21 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 487 | 1180.89 | wind | 3 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 614 | 1185.43 | humidity | 80 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 666 | 1187.51 | wind | 9 | 43200 | > th | dose dependent | sin | 14 | NA |
| 699 | 1188.71 | wind | 9 | 43200 | < th | dose dependent | sin | 3 | NA |
| 712 | 1189.37 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 732 | 1189.99 | wind | 9 | 43200 | < th | dose dependent | rect. | 6 | 8 |
| 792 | 1192.78 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 846 | 1195.86 | wind | 1 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 931 | 1199.94 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 19 |
| 960 | 1201.04 | wind | 9 | 43200 | < th | dose dependent | rect. | 9 | 1 |