Os04g0386900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transcriptional factor B3 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0386900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Transcriptional factor B3 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 221.57 | 0.699 | 4.79 | -2.94 | 3.67 | -4.24 | -3.72 | 3.07 | -0.299 | 21.1 | 30.66 | 89 | 8.83 | -- |
| 226.95 | 0.702 | 4.75 | -2.65 | 3.48 | -3.94 | -1.99 | -- | -0.211 | 20.9 | 30.25 | 117 | 9.41 | -- |
| 235.54 | 0.715 | 4.74 | -2.43 | 3.43 | -3.96 | -- | -1.14 | -0.213 | 20.9 | 29.74 | 101 | 9.35 | -- |
| 238.06 | 0.719 | 4.75 | -2.49 | 3.43 | -3.9 | -- | -- | -0.228 | 20.9 | 29.73 | 99 | 9.23 | -- |
| 304.53 | 0.813 | 4.69 | -2.39 | -- | -3.85 | -- | -0.887 | -0.222 | -- | 46.69 | 973 | 7.62 | -- |
| 350.35 | 0.878 | 4.62 | -2.05 | 2.33 | -- | -1.74 | -- | 0.202 | 19.1 | -- | -- | -- | -- |
| 358.26 | 0.886 | 4.62 | -2.02 | 2.33 | -- | -- | -- | 0.198 | 19.2 | -- | -- | -- | -- |
| 293.26 | 0.798 | 4.63 | -2.58 | -- | -3.87 | -- | -- | -0.14 | -- | 51.39 | 1040 | 8.1 | -- |
| 397.24 | 0.928 | 4.66 | -- | 3.47 | -3.4 | -- | -- | 0.169 | 21 | 32.34 | 47 | 7.98 | -- |
| 644.5 | 1.19 | 4.57 | -2.06 | -- | -- | -- | -- | 0.157 | -- | -- | -- | -- | -- |
| 465.96 | 1.01 | 4.57 | -- | 2.35 | -- | -- | -- | 0.423 | 19.1 | -- | -- | -- | -- |
| 449.21 | 0.987 | 4.55 | -- | -- | -3.03 | -- | -- | 0.29 | -- | 79.61 | 1046 | 7.94 | -- |
| 756.91 | 1.28 | 4.52 | -- | -- | -- | -- | -- | 0.386 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 222.23 | temperature | 30 | 90 | < th | dose dependent | sin | 15 | NA |
| 2 | 222.58 | temperature | 10 | 90 | > th | dose dependent | sin | 15 | NA |
| 3 | 222.70 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 14 |
| 16 | 225.82 | temperature | 30 | 270 | < th | dose dependent | sin | 17 | NA |
| 57 | 232.62 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 10 |
| 124 | 239.79 | temperature | 25 | 10 | < th | dose dependent | rect. | 14 | 12 |
| 142 | 240.96 | temperature | 20 | 720 | > th | dose dependent | rect. | 7 | 17 |
| 179 | 242.78 | temperature | 20 | 720 | > th | dose dependent | sin | 21 | NA |
| 218 | 244.05 | temperature | 20 | 270 | > th | dose dependent | rect. | 11 | 21 |
| 244 | 244.88 | temperature | 20 | 10 | > th | dose dependent | rect. | 14 | 15 |
| 265 | 245.31 | temperature | 15 | 720 | > th | dose dependent | rect. | 12 | 7 |
| 297 | 246.06 | temperature | 30 | 720 | < th | dose dependent | rect. | 8 | 14 |
| 323 | 246.85 | temperature | 30 | 720 | < th | dose dependent | sin | 21 | NA |
| 648 | 252.46 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 687 | 252.89 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 855 | 255.07 | temperature | 25 | 720 | < th | dose independent | rect. | 4 | 18 |
| 894 | 255.63 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 16 |
| 932 | 256.07 | temperature | 25 | 720 | > th | dose independent | sin | 22 | NA |
| 968 | 256.50 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 14 |
| 997 | 256.88 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 23 |