Os04g0382400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0382400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 449.65 | 0.996 | 3.24 | -0.292 | 0.119 | 1.37 | -0.945 | 3.14 | 0.193 | 12.2 | 23.9 | 2878 | -- | -- |
| 458.54 | 0.997 | 3.15 | 0.251 | 0.0435 | 0.965 | -1.02 | -- | 0.287 | 12.1 | 31.62 | 2260 | -- | -- |
| 453.03 | 0.991 | 3.25 | -0.332 | 0.147 | 1.41 | -- | 3.29 | 0.18 | 10.4 | 23.7 | 2967 | -- | -- |
| 462.21 | 1 | 3.16 | 0.195 | 0.056 | 0.925 | -- | -- | 0.27 | 11.5 | 31.9 | 2261 | -- | -- |
| 454.37 | 0.993 | 3.25 | -0.328 | -- | 1.43 | -- | 3.29 | 0.186 | -- | 23.7 | 2942 | -- | -- |
| 474.77 | 1.02 | 3.2 | -0.115 | 0.154 | -- | -0.903 | -- | 0.0777 | 12 | -- | -- | -- | -- |
| 478.25 | 1.02 | 3.2 | -0.152 | 0.161 | -- | -- | -- | 0.0728 | 11.2 | -- | -- | -- | -- |
| 462.38 | 1 | 3.16 | 0.202 | -- | 0.934 | -- | -- | 0.275 | -- | 31.9 | 2307 | -- | -- |
| 462.87 | 1 | 3.17 | -- | 0.109 | 0.894 | -- | -- | 0.226 | 12.7 | 46.24 | 1959 | -- | -- |
| 479.87 | 1.02 | 3.21 | -0.156 | -- | -- | -- | -- | 0.0714 | -- | -- | -- | -- | -- |
| 478.85 | 1.02 | 3.2 | -- | 0.163 | -- | -- | -- | 0.0898 | 11.2 | -- | -- | -- | -- |
| 463.25 | 1 | 3.17 | -- | -- | 0.856 | -- | -- | 0.227 | -- | 34.4 | 2289 | -- | -- |
| 480.51 | 1.02 | 3.2 | -- | -- | -- | -- | -- | 0.0887 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 441.44 | radiation | 1 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 2 | 441.60 | radiation | 1 | 14400 | < th | dose independent | rect. | 12 | 4 |
| 3 | 442.03 | radiation | 1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 5 | 442.10 | radiation | 1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 9 | 442.20 | radiation | 1 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 20 | 443.23 | radiation | 1 | 14400 | < th | dose dependent | rect. | 12 | 5 |
| 29 | 444.17 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 33 | 445.06 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 36 | 445.48 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 39 | 446.23 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 20 | 13 |
| 41 | 446.50 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 43 | 446.70 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 48 | 447.33 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 52 | 447.40 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 61 | 447.55 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 9 | 3 |
| 62 | 447.72 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 65 | 447.77 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 20 | 16 |
| 66 | 447.81 | temperature | 20 | 30 | < th | dose independent | rect. | 6 | 2 |
| 70 | 447.94 | temperature | 20 | 90 | < th | dose dependent | rect. | 6 | 2 |
| 83 | 448.20 | wind | 5 | 4320 | < th | dose independent | rect. | 22 | 2 |
| 104 | 448.57 | humidity | 70 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 111 | 448.67 | radiation | 30 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 132 | 448.91 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 134 | 448.94 | wind | 7 | 1440 | > th | dose independent | rect. | 22 | 11 |
| 135 | 449.00 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 136 | 449.01 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 6 | 7 |
| 137 | 449.02 | temperature | 20 | 4320 | < th | dose independent | sin | 15 | NA |
| 145 | 449.06 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 146 | 449.07 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 24 | 9 |
| 148 | 449.08 | humidity | 70 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 156 | 449.15 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 7 |
| 158 | 449.16 | temperature | 10 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 159 | 449.17 | temperature | 30 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 160 | 449.18 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 162 | 449.18 | atmosphere | 1005 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 164 | 449.20 | temperature | 20 | 4320 | < th | dose independent | rect. | 14 | 14 |
| 170 | 449.23 | wind | 7 | 1440 | < th | dose independent | rect. | 22 | 11 |
| 195 | 449.32 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 18 |
| 205 | 449.35 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 13 |
| 208 | 449.36 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |
| 223 | 449.45 | wind | 5 | 1440 | < th | dose independent | rect. | 20 | 14 |
| 232 | 449.48 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 8 |
| 240 | 449.52 | temperature | 20 | 4320 | > th | dose independent | rect. | 14 | 14 |
| 244 | 449.54 | wind | 7 | 1440 | > th | dose independent | rect. | 24 | 9 |
| 246 | 449.54 | temperature | 20 | 4320 | > th | dose independent | rect. | 14 | 17 |
| 249 | 449.55 | wind | 5 | 1440 | > th | dose independent | rect. | 20 | 14 |
| 256 | 449.58 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 265 | 449.60 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 4 |
| 266 | 449.61 | radiation | 1 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 268 | 449.61 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 13 |
| 274 | 449.63 | temperature | 20 | 4320 | > th | dose independent | rect. | 14 | 11 |
| 293 | 449.67 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 7 |
| 308 | 449.70 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 10 | 15 |
| 312 | 449.71 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 11 | 17 |
| 325 | 449.74 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 326 | 449.75 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 334 | 449.77 | atmosphere | 1015 | 43200 | > th | dose dependent | sin | 16 | NA |
| 340 | 449.78 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 14 | 14 |
| 348 | 449.81 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 356 | 449.83 | humidity | 50 | 4320 | < th | dose dependent | rect. | 14 | 2 |
| 363 | 449.84 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 16 | 11 |
| 367 | 449.86 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 377 | 449.89 | radiation | 1 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 422 | 449.96 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 11 |
| 439 | 449.99 | temperature | 25 | 4320 | < th | dose dependent | rect. | 22 | 1 |
| 448 | 450.02 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 471 | 450.07 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 502 | 450.14 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 536 | 450.22 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 20 | 11 |
| 543 | 450.23 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 10 | 9 |
| 552 | 450.25 | wind | 5 | 1440 | > th | dose dependent | rect. | 21 | 12 |
| 553 | 450.26 | wind | 9 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 554 | 450.26 | atmosphere | 995 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 559 | 450.26 | atmosphere | 995 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 707 | 450.26 | wind | 9 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 708 | 450.26 | atmosphere | 995 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 713 | 450.26 | atmosphere | 995 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 864 | 450.27 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 16 | 6 |
| 889 | 450.32 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 4 | 9 |
| 987 | 450.57 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 13 | 8 |
| 998 | 450.58 | atmosphere | 995 | 4320 | < th | dose dependent | sin | 8 | NA |