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Os04g0349300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.15 (0.0245) R2 : 0.315
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.805 (0.0622) R2dC : 0.252 R2C : 0.241
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.318 (0.0517) R2dN8 : 0.0736 R2N8 : 0.0632
σ : 0.463
deviance : 97.96
__
_____
C
peak time of C : 3.65
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
80.96 0.423 7.07 0.612 0.678 0.448 0.0574 -0.857 0.607 3.96 23.6 55 -- --
84.11 0.43 7.1 0.318 0.693 0.427 -0.449 -- 0.515 4.18 23.6 55 -- --
80.93 0.419 7.07 0.609 0.673 0.451 -- -0.838 0.611 3.98 23.71 62 -- --
84.39 0.428 7.11 0.315 0.687 0.44 -- -- 0.499 4.12 23.41 26 -- --
98.21 0.462 7.04 0.569 -- 0.657 -- -0.851 0.785 -- 24.6 43 -- --
97.14 0.462 7.14 0.131 0.805 -- -0.34 -- 0.331 3.72 -- -- -- --
97.48 0.462 7.14 0.136 0.802 -- -- -- 0.333 3.65 -- -- -- --
101.28 0.469 7.07 0.304 -- 0.605 -- -- 0.678 -- 25.1 24 -- --
86.85 0.434 7.11 -- 0.704 0.388 -- -- 0.461 4.04 23.5 25 -- --
133.19 0.539 7.14 0.169 -- -- -- -- 0.355 -- -- -- -- --
97.96 0.463 7.15 -- 0.805 -- -- -- 0.318 3.65 -- -- -- --
103.69 0.474 7.08 -- -- 0.579 -- -- 0.629 -- 25.02 24 -- --
133.94 0.54 7.15 -- -- -- -- -- 0.336 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 82.69 temperature 30.0 30 < th dose dependent rect. 7 23
2 82.83 temperature 30.0 30 < th dose dependent rect. 5 23
4 83.07 temperature 30.0 30 < th dose dependent rect. 9 23
6 83.34 temperature 25.0 90 < th dose dependent rect. 3 20
7 83.34 temperature 25.0 90 < th dose dependent rect. 23 23
9 83.49 temperature 25.0 90 < th dose dependent rect. 1 22
10 83.52 temperature 30.0 10 < th dose dependent rect. 13 23
12 83.56 temperature 15.0 30 > th dose dependent rect. 6 23
13 83.58 temperature 30.0 30 < th dose dependent no NA NA
15 83.61 temperature 30.0 30 < th dose dependent rect. 11 23
16 83.63 temperature 30.0 30 < th dose dependent rect. 17 23
17 83.64 temperature 30.0 30 < th dose dependent rect. 15 23
18 83.66 temperature 25.0 10 < th dose dependent rect. 2 22
34 83.92 temperature 25.0 30 < th dose dependent rect. 19 23
37 83.93 temperature 25.0 30 < th dose dependent rect. 21 23
43 83.96 radiation 1.0 720 < th dose dependent rect. 7 12
69 84.22 precipitation 0.1 14400 > th dose dependent rect. 14 4
86 84.40 temperature 15.0 30 > th dose dependent rect. 23 23
89 84.43 temperature 25.0 30 < th dose dependent sin 4 NA
90 84.44 humidity 50.0 14400 < th dose independent sin 10 NA
96 84.51 precipitation 0.1 14400 > th dose dependent rect. 12 6
118 84.67 temperature 15.0 30 > th dose dependent no NA NA
131 84.74 humidity 50.0 14400 < th dose independent rect. 16 20
137 84.76 humidity 50.0 14400 < th dose independent rect. 17 18
166 84.90 precipitation 0.1 14400 > th dose independent rect. 14 4
170 84.91 precipitation 0.1 14400 < th dose independent rect. 14 4
171 84.91 precipitation 0.1 14400 < th dose dependent rect. 14 4
174 84.92 temperature 20.0 30 > th dose dependent rect. 19 23
183 84.95 temperature 25.0 10 < th dose dependent rect. 5 15
199 85.02 humidity 60.0 14400 > th dose independent rect. 17 17
213 85.09 humidity 50.0 14400 > th dose independent rect. 16 20
218 85.11 precipitation 0.1 43200 < th dose independent rect. 17 1
219 85.11 radiation 1.0 720 < th dose independent rect. 7 12
220 85.11 precipitation 0.1 43200 < th dose dependent rect. 17 1
231 85.14 precipitation 0.1 43200 > th dose independent rect. 17 1
244 85.21 humidity 60.0 14400 < th dose dependent rect. 16 19
254 85.26 precipitation 0.1 14400 > th dose dependent rect. 17 2
263 85.27 temperature 15.0 30 > th dose dependent rect. 3 23
286 85.34 temperature 25.0 10 > th dose independent rect. 23 23
311 85.41 humidity 50.0 14400 < th dose independent rect. 13 1
343 85.46 humidity 50.0 14400 > th dose independent rect. 13 1
351 85.48 temperature 25.0 30 < th dose independent rect. 5 23
361 85.52 humidity 50.0 14400 > th dose independent rect. 9 5
366 85.53 humidity 50.0 14400 > th dose independent sin 11 NA
388 85.63 humidity 50.0 14400 > th dose independent rect. 24 14
389 85.63 humidity 50.0 14400 > th dose independent rect. 22 16
398 85.64 humidity 50.0 14400 > th dose independent rect. 5 9
400 85.64 humidity 50.0 14400 > th dose independent rect. 2 12
413 85.67 humidity 70.0 14400 < th dose dependent rect. 18 16
421 85.71 temperature 25.0 10 < th dose independent rect. 2 22
422 85.71 temperature 25.0 30 < th dose dependent rect. 5 13
424 85.72 wind 1.0 43200 > th dose independent rect. 7 1
445 85.77 humidity 60.0 14400 < th dose dependent sin 10 NA
446 85.77 temperature 30.0 30 < th dose dependent rect. 17 15
454 85.80 radiation 1.0 720 < th dose dependent rect. 7 21
457 85.81 temperature 25.0 10 < th dose independent rect. 5 15
468 85.84 humidity 50.0 14400 < th dose independent rect. 9 5
567 85.97 temperature 25.0 10 > th dose independent rect. 19 23
577 86.00 humidity 50.0 14400 > th dose independent sin 6 NA
585 86.01 temperature 30.0 30 < th dose dependent rect. 14 18
588 86.02 humidity 50.0 14400 < th dose independent sin 7 NA
596 86.04 atmosphere 1005.0 720 < th dose independent rect. 6 12
643 86.09 temperature 20.0 90 > th dose dependent rect. 10 23
648 86.10 temperature 20.0 720 > th dose dependent rect. 12 17
657 86.12 atmosphere 1005.0 720 > th dose dependent rect. 7 12
672 86.16 wind 1.0 14400 > th dose independent rect. 1 2
679 86.16 temperature 20.0 30 > th dose dependent rect. 8 23
687 86.18 temperature 25.0 10 > th dose independent rect. 6 23
688 86.18 temperature 20.0 720 > th dose dependent rect. 12 19
710 86.23 humidity 60.0 14400 < th dose dependent rect. 12 1
745 86.29 temperature 25.0 10 < th dose independent rect. 5 13
758 86.32 wind 1.0 14400 < th dose independent rect. 1 2
785 86.34 humidity 60.0 14400 < th dose dependent rect. 20 18
790 86.35 atmosphere 1005.0 720 < th dose independent rect. 9 6
793 86.35 temperature 25.0 10 > th dose independent rect. 23 19
799 86.35 humidity 60.0 14400 < th dose dependent rect. 8 6
819 86.36 atmosphere 1005.0 720 > th dose independent rect. 5 13
825 86.37 temperature 25.0 10 < th dose independent rect. 23 23
876 86.41 humidity 50.0 14400 < th dose independent rect. 12 3
903 86.43 radiation 1.0 720 < th dose independent rect. 7 14
913 86.43 temperature 20.0 30 > th dose dependent rect. 15 23
914 86.44 humidity 80.0 1440 < th dose independent rect. 11 1
915 86.44 temperature 25.0 30 < th dose independent rect. 5 19
921 86.45 humidity 80.0 1440 > th dose independent rect. 11 1
962 86.49 atmosphere 1005.0 720 > th dose independent rect. 7 11
964 86.49 temperature 25.0 30 < th dose independent rect. 11 23
972 86.50 temperature 25.0 10 < th dose independent no NA NA
977 86.50 temperature 25.0 10 < th dose independent rect. 21 23
979 86.50 wind 9.0 43200 > th dose dependent rect. 20 1
983 86.51 humidity 50.0 14400 < th dose independent rect. 9 2
985 86.51 radiation 1.0 720 < th dose independent rect. 7 21
986 86.51 temperature 25.0 30 < th dose independent rect. 17 23
992 86.52 temperature 25.0 30 < th dose independent rect. 15 23
993 86.52 temperature 25.0 30 < th dose independent rect. 19 23
994 86.52 radiation 1.0 720 < th dose dependent rect. 17 2