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Os04g0348000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.8 (0.00787) R2 : 0.00135
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.013 (0.0166) R2dN8 : 0.00175 R2N8 : 0.00135
σ : 0.148
deviance : 10.07
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
8.48 0.137 11.8 0.0119 0.118 0.104 0.257 0.771 0.0273 3.56 30.2 731 -- --
8.47 0.136 11.8 -0.0559 0.121 0.203 0.251 -- 0.0276 3.65 31.44 721 -- --
8.66 0.137 11.8 0.0149 0.115 0.0841 -- 0.865 0.0304 3.73 30.6 772 -- --
8.67 0.137 11.8 -0.0568 0.117 0.182 -- -- 0.0245 3.68 31.47 757 -- --
9.23 0.141 11.8 0.0561 -- 0.0444 -- 0.906 0.0307 -- 30.5 933 -- --
9.27 0.143 11.8 -0.0276 0.0975 -- 0.23 -- 0.00868 1.98 -- -- -- --
9.47 0.144 11.8 -0.0347 0.0989 -- -- -- 0.00721 2.32 -- -- -- --
9.26 0.142 11.8 -0.0605 -- 0.149 -- -- 0.0314 -- 30.66 932 -- --
8.75 0.138 11.8 -- 0.113 0.193 -- -- 0.0273 3.78 32.16 748 -- --
10.05 0.148 11.8 -0.0305 -- -- -- -- 0.00962 -- -- -- -- --
9.5 0.144 11.8 -- 0.0982 -- -- -- 0.0111 2.32 -- -- -- --
9.35 0.142 11.8 -- -- 0.143 -- -- 0.0359 -- 31.27 904 -- --
10.07 0.148 11.8 -- -- -- -- -- 0.013 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 8.29 temperature 25 270 > th dose dependent rect. 16 15
2 8.30 temperature 25 270 > th dose dependent rect. 16 6
5 8.30 temperature 25 270 > th dose dependent rect. 16 10
10 8.31 radiation 40 10 < th dose independent rect. 16 23
15 8.35 temperature 25 10 > th dose dependent rect. 18 13
19 8.36 temperature 25 270 > th dose dependent rect. 23 8
20 8.37 temperature 25 270 > th dose dependent rect. 17 2
29 8.38 radiation 10 4320 < th dose independent rect. 16 1
30 8.38 radiation 40 10 < th dose independent rect. 3 23
31 8.38 radiation 40 90 < th dose independent rect. 16 23
37 8.39 radiation 20 270 > th dose dependent rect. 10 2
40 8.40 temperature 30 720 < th dose independent rect. 15 6
41 8.40 radiation 40 270 > th dose dependent rect. 10 2
42 8.40 temperature 30 720 > th dose dependent rect. 14 4
61 8.41 temperature 25 720 > th dose dependent rect. 8 1
67 8.41 temperature 15 270 > th dose dependent rect. 15 7
84 8.42 temperature 30 720 > th dose dependent sin 14 NA
87 8.42 temperature 25 4320 > th dose dependent rect. 4 2
123 8.43 temperature 30 720 > th dose independent rect. 16 1
124 8.43 humidity 70 270 < th dose independent rect. 17 2
166 8.45 radiation 40 90 < th dose independent rect. 7 16
191 8.46 radiation 40 10 > th dose independent rect. 11 1
192 8.46 radiation 20 720 > th dose independent rect. 16 1
221 8.46 radiation 40 10 < th dose independent rect. 8 15
228 8.46 temperature 25 1440 > th dose dependent rect. 24 1
255 8.47 temperature 30 720 < th dose independent rect. 24 21
261 8.47 radiation 1 90 > th dose dependent rect. 10 6
282 8.48 radiation 30 270 > th dose independent rect. 10 2
299 8.48 radiation 40 10 < th dose independent rect. 16 20
301 8.48 radiation 40 10 > th dose independent rect. 13 23
319 8.48 humidity 80 270 < th dose dependent rect. 16 17
321 8.48 radiation 1 90 > th dose dependent rect. 10 21
326 8.49 temperature 25 720 > th dose independent rect. 8 1
327 8.49 temperature 30 720 < th dose independent rect. 15 12
329 8.49 temperature 30 720 > th dose dependent no NA NA
332 8.49 radiation 20 10 > th dose dependent rect. 11 1
342 8.49 temperature 15 10 > th dose dependent rect. 16 8
388 8.49 humidity 80 270 < th dose dependent rect. 17 15
498 8.49 radiation 30 10 > th dose dependent rect. 13 23
499 8.50 temperature 30 270 > th dose independent sin 12 NA
523 8.50 temperature 30 720 < th dose independent rect. 9 18
525 8.50 radiation 40 10 < th dose independent rect. 3 21
530 8.50 radiation 10 4320 < th dose dependent rect. 16 1
540 8.50 humidity 90 270 < th dose dependent rect. 16 6
589 8.51 radiation 40 10 < th dose independent rect. 1 23
593 8.51 radiation 40 270 > th dose dependent sin 8 NA
611 8.51 humidity 80 270 < th dose dependent rect. 17 4
650 8.51 humidity 80 270 < th dose dependent rect. 16 13
687 8.52 temperature 30 270 < th dose independent sin 12 NA
689 8.52 temperature 25 720 > th dose independent rect. 23 2
691 8.52 humidity 50 270 < th dose independent rect. 12 6
697 8.52 radiation 40 90 < th dose independent rect. 3 10
714 8.52 temperature 30 720 < th dose independent rect. 9 22
717 8.52 humidity 50 270 < th dose dependent sin 5 NA
797 8.52 humidity 50 270 < th dose dependent rect. 17 23
801 8.53 temperature 25 4320 > th dose independent rect. 4 2
829 8.53 humidity 50 270 < th dose dependent sin 3 NA
839 8.53 humidity 70 270 < th dose dependent rect. 17 2
850 8.53 humidity 50 270 < th dose dependent rect. 12 5
895 8.53 radiation 10 270 > th dose dependent rect. 16 15
908 8.53 radiation 1 10 > th dose dependent rect. 11 20
916 8.54 humidity 50 270 < th dose independent sin 13 NA
922 8.54 humidity 50 270 < th dose independent sin 6 NA
924 8.54 temperature 25 4320 > th dose independent rect. 24 6
925 8.54 temperature 25 270 > th dose independent rect. 22 8
926 8.54 temperature 30 720 < th dose independent rect. 11 10
927 8.54 temperature 30 720 < th dose independent rect. 15 10
928 8.54 radiation 40 10 < th dose independent rect. 4 11
929 8.54 temperature 30 720 < th dose independent rect. 9 12
931 8.54 temperature 30 720 < th dose independent rect. 11 16
949 8.54 humidity 50 270 < th dose dependent sin 13 NA
963 8.54 radiation 20 720 > th dose dependent rect. 16 1
964 8.54 radiation 1 4320 > th dose dependent rect. 16 1
979 8.54 radiation 20 10 > th dose dependent rect. 11 5
981 8.54 temperature 25 4320 > th dose dependent rect. 24 6