Os04g0321600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase M24 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0321600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Peptidase M24 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12.34 | 0.165 | 13 | 1.12 | 0.198 | -0.302 | 0.214 | 0.254 | 0.205 | 16.7 | 86.78 | 1177 | -- | -- |
| 12.43 | 0.164 | 13 | 1.1 | 0.201 | -0.294 | 0.172 | -- | 0.202 | 16.7 | 86.31 | 1191 | -- | -- |
| 12.43 | 0.164 | 13 | 1.12 | 0.201 | -0.293 | -- | 0.21 | 0.204 | 16.3 | 86.99 | 1206 | -- | -- |
| 12.48 | 0.165 | 13 | 1.11 | 0.202 | -0.283 | -- | -- | 0.203 | 16.3 | 86 | 1213 | -- | -- |
| 14.5 | 0.177 | 13 | 1.12 | -- | -0.346 | -- | 0.369 | 0.2 | -- | 87 | 1181 | -- | -- |
| 13.8 | 0.174 | 13 | 1.14 | 0.247 | -- | 0.0607 | -- | 0.17 | 15.7 | -- | -- | -- | -- |
| 13.81 | 0.174 | 13 | 1.14 | 0.247 | -- | -- | -- | 0.17 | 15.7 | -- | -- | -- | -- |
| 14.54 | 0.178 | 13 | 1.08 | -- | -0.378 | -- | -- | 0.207 | -- | 86.38 | 1199 | -- | -- |
| 43.83 | 0.308 | 13 | -- | 0.156 | -0.492 | -- | -- | 0.103 | 17.1 | 86.83 | 1209 | -- | -- |
| 17.19 | 0.194 | 13 | 1.13 | -- | -- | -- | -- | 0.164 | -- | -- | -- | -- | -- |
| 47.83 | 0.324 | 13 | -- | 0.225 | -- | -- | -- | 0.0439 | 15.7 | -- | -- | -- | -- |
| 44.6 | 0.311 | 13 | -- | -- | -0.563 | -- | -- | 0.108 | -- | 87.19 | 1224 | -- | -- |
| 50.62 | 0.332 | 13 | -- | -- | -- | -- | -- | 0.039 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 11.85 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 21 | 3 |
| 10 | 12.07 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 14 | 12.12 | humidity | 90.0 | 720 | < th | dose independent | rect. | 9 | 19 |
| 19 | 12.15 | humidity | 90.0 | 720 | < th | dose independent | rect. | 16 | 12 |
| 22 | 12.17 | humidity | 70.0 | 90 | > th | dose independent | rect. | 17 | 12 |
| 32 | 12.20 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 33 | 12.20 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 4 |
| 46 | 12.23 | temperature | 25.0 | 720 | > th | dose independent | rect. | 15 | 9 |
| 48 | 12.24 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 24 | 2 |
| 63 | 12.26 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 4 |
| 80 | 12.28 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 24 | 5 |
| 83 | 12.29 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 88 | 12.29 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 4 |
| 96 | 12.31 | humidity | 90.0 | 720 | > th | dose independent | rect. | 23 | 1 |
| 97 | 12.31 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 99 | 12.31 | temperature | 30.0 | 90 | < th | dose independent | rect. | 17 | 12 |
| 103 | 12.32 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 6 | 4 |
| 108 | 12.32 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 19 | 10 |
| 109 | 12.33 | humidity | 90.0 | 720 | < th | dose independent | sin | 15 | NA |
| 110 | 12.33 | temperature | 25.0 | 720 | > th | dose independent | rect. | 16 | 5 |
| 111 | 12.33 | temperature | 25.0 | 720 | < th | dose independent | rect. | 19 | 5 |
| 126 | 12.34 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 19 | 11 |
| 135 | 12.35 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 19 | 10 |
| 142 | 12.35 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 13 | 3 |
| 143 | 12.35 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 5 |
| 147 | 12.36 | humidity | 90.0 | 720 | > th | dose independent | rect. | 21 | 3 |
| 153 | 12.36 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 174 | 12.37 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 14 | 17 |
| 176 | 12.38 | humidity | 80.0 | 720 | > th | dose independent | rect. | 21 | 1 |
| 177 | 12.38 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 2 |
| 182 | 12.38 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 183 | 12.38 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 184 | 12.38 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 5 |
| 192 | 12.39 | temperature | 25.0 | 720 | > th | dose independent | sin | 16 | NA |
| 195 | 12.39 | wind | 7.0 | 270 | < th | dose independent | rect. | 4 | 13 |
| 222 | 12.41 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 11 | 3 |
| 242 | 12.42 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 20 | 10 |
| 245 | 12.42 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 10 |
| 249 | 12.42 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 20 | 10 |
| 255 | 12.42 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 20 | 10 |
| 256 | 12.42 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 20 | 10 |
| 267 | 12.42 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 14 |
| 273 | 12.42 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 306 | 12.43 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 21 | 20 |
| 323 | 12.44 | wind | 7.0 | 90 | < th | dose dependent | rect. | 19 | 10 |
| 328 | 12.45 | temperature | 25.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 337 | 12.45 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 22 | 5 |
| 351 | 12.46 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 21 | 20 |
| 367 | 12.46 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 11 | 16 |
| 379 | 12.47 | temperature | 25.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 380 | 12.47 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 386 | 12.47 | humidity | 90.0 | 720 | < th | dose independent | rect. | 15 | 21 |
| 393 | 12.47 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 11 | 6 |
| 398 | 12.47 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 14 | 10 |
| 415 | 12.48 | humidity | 80.0 | 720 | > th | dose dependent | sin | 14 | NA |
| 428 | 12.48 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 3 | 21 |
| 444 | 12.49 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 458 | 12.49 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 13 | 14 |
| 472 | 12.50 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 490 | 12.50 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 492 | 12.50 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 11 | 3 |
| 514 | 12.51 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 524 | 12.51 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 533 | 12.51 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 10 |
| 548 | 12.52 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 557 | 12.52 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 11 |
| 558 | 12.52 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 10 | 16 |
| 564 | 12.52 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 21 | 20 |
| 570 | 12.52 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 16 | 5 |
| 591 | 12.53 | atmosphere | 1010.0 | 720 | < th | dose independent | rect. | 16 | 4 |
| 600 | 12.53 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 17 | 11 |
| 602 | 12.53 | radiation | 10.0 | 270 | < th | dose independent | rect. | 16 | 12 |
| 655 | 12.54 | wind | 5.0 | 90 | < th | dose independent | rect. | 19 | 10 |
| 662 | 12.54 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 17 | 19 |
| 667 | 12.54 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 24 | 1 |
| 669 | 12.54 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 24 | 2 |
| 695 | 12.54 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 712 | 12.55 | temperature | 25.0 | 720 | < th | dose independent | rect. | 15 | 9 |
| 743 | 12.55 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 24 | 4 |
| 778 | 12.56 | atmosphere | 1010.0 | 720 | < th | dose independent | rect. | 17 | 2 |
| 782 | 12.56 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 1 | 5 |
| 785 | 12.56 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 1 | 5 |
| 789 | 12.56 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 1 | 5 |
| 798 | 12.56 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 1 | 5 |
| 799 | 12.56 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 1 | 5 |
| 811 | 12.56 | humidity | 90.0 | 720 | < th | dose independent | rect. | 15 | 6 |
| 817 | 12.56 | humidity | 90.0 | 720 | < th | dose independent | rect. | 9 | 12 |
| 826 | 12.56 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 19 |
| 836 | 12.56 | humidity | 90.0 | 720 | < th | dose independent | rect. | 24 | 23 |
| 839 | 12.56 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 5 | 1 |
| 869 | 12.57 | wind | 5.0 | 720 | < th | dose independent | rect. | 24 | 3 |
| 880 | 12.57 | humidity | 90.0 | 720 | > th | dose independent | rect. | 14 | 10 |
| 895 | 12.57 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 22 |
| 897 | 12.57 | humidity | 90.0 | 720 | < th | dose independent | rect. | 22 | 23 |
| 935 | 12.58 | humidity | 90.0 | 720 | < th | dose independent | no | NA | NA |
| 936 | 12.58 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 950 | 12.58 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 7 | 14 |
| 952 | 12.58 | humidity | 90.0 | 720 | < th | dose independent | rect. | 24 | 21 |
| 955 | 12.58 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 23 |
| 984 | 12.59 | wind | 9.0 | 4320 | < th | dose independent | rect. | 3 | 3 |