BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os04g0321600 Os04g0321600|AK121570
         (1056 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G10710.1  | chr4:6602226-6605450 REVERSE LENGTH=1075          1344   0.0  
AT4G10670.1  | chr4:6584727-6585758 FORWARD LENGTH=344            483   e-136

>AT4G10710.1 | chr4:6602226-6605450 REVERSE LENGTH=1075
          Length = 1074

 Score = 1344 bits (3478), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 664/1055 (62%), Positives = 797/1055 (75%), Gaps = 20/1055 (1%)

Query: 1    MAD--NGNAK--PXXXXXXA---YTINLDNFSKRLKVFYDHWKEHNSDLWGSSNAIAIAT 53
            MAD  NGNA+  P      A   Y+I++ NF  R +  Y+HWK+H++DLWGS++A+AIAT
Sbjct: 1    MADSRNGNARAPPSGVPPKAGNTYSIDVKNFISRARALYEHWKKHSADLWGSADALAIAT 60

Query: 54   PPPSEDLRYLKSSALDVWLLGYEFPETIIVFMHKQIHFLCSQKKANLIGTLKKAANDAVG 113
            PP S+DLRYLKSSAL++WLLGYEFP+TI+VF  KQIHFLCS+ KA+L+  +KK A+D + 
Sbjct: 61   PPASDDLRYLKSSALNIWLLGYEFPDTIMVFTKKQIHFLCSRNKASLLEVVKKPAHDELK 120

Query: 114  ADIVLHVKAKNDSGVGLMEDIVRAVCAQSK---SDDPIVGHIAKEAPEGKLLEAWADKLS 170
             D+++HVK K D G GLM+ I RA+   S+   +D  +VGHIA+EAPEGKLLE W ++L 
Sbjct: 121  LDVIMHVKPKGDDGTGLMDAIFRAIRDLSRGDGNDSQVVGHIAREAPEGKLLETWTERLK 180

Query: 171  SSSVQLTDITNGFSELFAMKDTSEITCVKKASYLTSSVMKNFVVPKLEKVIDEERKVTHS 230
            +++ Q  DIT G S+LFA+KD +E+  VKKA+YL  SVMKN VVP LE  IDEE+ VTHS
Sbjct: 181  NANFQFVDITGGLSDLFAVKDDTEVMSVKKAAYLAYSVMKNVVVPNLESAIDEEKDVTHS 240

Query: 231  SLMDETEKAILDPLKVKVKLKAENVDICYPPVFQSGGKFDLKPGASSNDDYLYYDSASVI 290
            +LMD TEKAIL+P K  VKLK ENVDICYPP+FQSGGKFDLKP A+SND+ L YD AS+I
Sbjct: 241  ALMDLTEKAILEPTKASVKLKPENVDICYPPIFQSGGKFDLKPSAASNDELLTYDPASII 300

Query: 291  ICAIGARYGNYCSNMARTFLIDATPTQIKAYETLMKAHEAALEALKPGNRMSAVYQAAVD 350
            ICA+GARY +YCSN+ART+LIDAT  Q KAYE L+KAHEAA++AL+ G +++ VYQAA+ 
Sbjct: 301  ICAVGARYNSYCSNVARTYLIDATSLQSKAYEVLLKAHEAAIDALRSGRKINTVYQAALS 360

Query: 351  VIEKNAPELLRNLTKSAGTGIGLEFRESGLNLNPKNDRIIKAGMVFNVSLGLHNLQAEKK 410
            V+EKNAPE +  LTKSAGTGIGLEFRESGLN+N KND++++  M FNVSLG  NL+ E +
Sbjct: 361  VVEKNAPEFVDKLTKSAGTGIGLEFRESGLNINAKNDKVLRPKMAFNVSLGFQNLECESE 420

Query: 411  SE-KTKQYSLLLADTCLVPLEN--LTASCSKLVKDVAYSFN-DEDEVLPVKKVEVNAKEA 466
            S  K K++SLLLADT LV  +   L   CSK VKDVAYSF  DE+E  P KK   +  E 
Sbjct: 421  SRSKNKKFSLLLADTVLVTDQKPELLTKCSKSVKDVAYSFKEDEEEEKPRKKARTSGSEN 480

Query: 467  LPPTKATLRSDNQEMSKEELRRQHQAELARQKNEETARRLAGVXXXXXXXXXXXXXXNEL 526
               TK  LRSD+  +SKEELR+QHQAELARQKNEETARRLAG                ++
Sbjct: 481  YI-TKTALRSDDHVVSKEELRKQHQAELARQKNEETARRLAGDSSGAGDSRSTAKTSADV 539

Query: 527  VAYKNVNDVPYARELVIQVDQKNEAVLLPIYGSMVPFHVSTVKSVTSHQD-NRTCTIRIF 585
            VAYKNVND+P+ +EL+IQVD +NEAVLLPIYGS+VPFHV+T+++V+ +QD NR C IRI 
Sbjct: 540  VAYKNVNDMPH-KELMIQVDTRNEAVLLPIYGSLVPFHVATIRTVSGNQDTNRNCYIRII 598

Query: 586  FNVPGMPFS-NDSN-LKSQGAIYLKEITFRSKDPRHSSEVVQQIKTLRRQVASRESERAE 643
            FNVPG PF+ +DSN LK+QGAIYLKE++FR+KD RHSSEV QQIKTLRRQV +RESERAE
Sbjct: 599  FNVPGTPFNPHDSNSLKNQGAIYLKEVSFRTKDSRHSSEVTQQIKTLRRQVMARESERAE 658

Query: 644  RATLVTQEKLQLTSNRNKPVRLSDVWIRPAFGGRGRKLTGTLESHVNGFRYSTSRADERV 703
            RATLVTQEKLQL  N+ KP+RLS++WIRP F GR +K+ GTLE+H NGFRYST+R DERV
Sbjct: 659  RATLVTQEKLQLAGNKFKPLRLSELWIRPPFSGR-KKIPGTLEAHANGFRYSTTRPDERV 717

Query: 704  DIMYGNVKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGNRRS 763
            D+++ N+KHAFFQPAEKEMITLLHFHLHNHIMVG KKTKDVQFYVEVMDVVQ+LGG RRS
Sbjct: 718  DVLFANIKHAFFQPAEKEMITLLHFHLHNHIMVGTKKTKDVQFYVEVMDVVQSLGGGRRS 777

Query: 764  ALXXXXXXXXXXXXXXKNRINMDFQNFVNKVNDHWSQPQFKGLDLEFDVPLRELGFHGVP 823
            A               KN+INMDF +F N+VND W  PQF  LDLEFD PLRELGFHGVP
Sbjct: 778  AYDPDEIDEEQRERDRKNKINMDFNHFANRVNDMWQLPQFASLDLEFDQPLRELGFHGVP 837

Query: 824  YKASAFIIPTSTCLVELIETPFLVVTLSEIEIVNLERVGFGTKNFDMAIVFKDFKKDVLR 883
            +K SAFIIPTS+CLVELIE PFLVV+LSEIEIVNLERVGFG KNFDMAI+FKDFKKDVLR
Sbjct: 838  HKTSAFIIPTSSCLVELIEYPFLVVSLSEIEIVNLERVGFGQKNFDMAIIFKDFKKDVLR 897

Query: 884  IDSIPSTSLDAIKEWLDTTDLKYYESRLNLNWRPILKTIIDDPQKFIDDGGWEFLNMEAX 943
            +DS+P++SL+ IKEWLDTTD+KYYES+LNLNWR ILKTI DDPQ FIDDGGWEFLN++  
Sbjct: 898  VDSVPTSSLEGIKEWLDTTDIKYYESKLNLNWRQILKTITDDPQSFIDDGGWEFLNLDGS 957

Query: 944  XXXXXXXXXXXQGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKTWEE 1003
                       +GY                                       KGKTW+E
Sbjct: 958  DSESGGSEESDKGYEPSDVEVESESEDEASESESLVESDDDEEEDSEQESEEEKGKTWDE 1017

Query: 1004 LEREASNADRENGAXXXXXXXXXXXKVKTFSKSRP 1038
            LEREA+NADRE+G            K+K F KSRP
Sbjct: 1018 LEREATNADREHGVESDSEEERKRRKMKAFGKSRP 1052



>AT4G10670.1 | chr4:6584727-6585758 FORWARD LENGTH=344
          Length = 343

 Score =  483 bits (1244), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 231/350 (66%), Positives = 283/350 (80%), Gaps = 8/350 (2%)

Query: 542 VIQVDQKNEAVLLPIYGSMVPFHVSTVKSVTSHQDNRTCTIRIFFNVPGMPFSNDSNLKS 601
           +I VD K++ VLLPIYG MVPF+V+T+++V  +Q+    TIR+ FNVPG P + + +LK+
Sbjct: 1   MITVDHKSDTVLLPIYGRMVPFNVTTIRTVLGNQN----TIRVIFNVPGTPLNPNDSLKN 56

Query: 602 QGAIYLKEITFRSKDPRHSSEVVQQIKTLRRQVASRESERAERATLVTQEKLQLTSNRNK 661
           + AIYLKE++FR+KD RHSS+VVQQ+K+LRR+V +RESERAER +LV QEKLQ+  N +K
Sbjct: 57  KDAIYLKEVSFRTKDSRHSSDVVQQVKSLRRKVMARESERAERTSLVNQEKLQIVRNNSK 116

Query: 662 PVRLSDVWIRPAFGGRGRKLTGTLESHVNGFRYSTSRADERVDIMYGNVKHAFFQPAEKE 721
           P+ LS++WIRP F GR +K  GTLE+HVNGFRYST+  +ERVD+++ N+KHAFFQPAEKE
Sbjct: 117 PLSLSNLWIRPPFSGR-KKNRGTLEAHVNGFRYSTT--NERVDVLFANIKHAFFQPAEKE 173

Query: 722 MITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGNRRS-ALXXXXXXXXXXXXXXK 780
           M TLLHFHLHNHIMVG KKTKDVQFYVEVMDVVQ+LGG RRS A               K
Sbjct: 174 MTTLLHFHLHNHIMVGTKKTKDVQFYVEVMDVVQSLGGRRRSSAYDADEIVEEQRERDRK 233

Query: 781 NRINMDFQNFVNKVNDHWSQPQFKGLDLEFDVPLRELGFHGVPYKASAFIIPTSTCLVEL 840
           N+INMDF +F N+VND W  PQF  L LEFD PLRE GF+GVP+K S FIIPTS+CLVEL
Sbjct: 234 NKINMDFNHFANQVNDMWQLPQFASLSLEFDQPLREFGFNGVPHKTSTFIIPTSSCLVEL 293

Query: 841 IETPFLVVTLSEIEIVNLERVGFGTKNFDMAIVFKDFKKDVLRIDSIPST 890
            E+PFLVV LSEIEIVNLERVGFG K+FDMAI+FKD KKDVLR+DS+P++
Sbjct: 294 TESPFLVVCLSEIEIVNLERVGFGQKSFDMAIIFKDLKKDVLRVDSVPTS 343



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.316    0.132    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 20,419,697
Number of extensions: 817713
Number of successful extensions: 2279
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 2266
Number of HSP's successfully gapped: 3
Length of query: 1056
Length of database: 11,106,569
Length adjustment: 109
Effective length of query: 947
Effective length of database: 8,118,225
Effective search space: 7687959075
Effective search space used: 7687959075
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 117 (49.7 bits)