Os04g0311500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF593 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0311500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF593 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.95 | 0.318 | 11.5 | -0.539 | 1.51 | 0.563 | -1.12 | 0.428 | 0.121 | 22.7 | 19.7 | 314 | -- | -- |
| 46.17 | 0.316 | 11.5 | -0.549 | 1.51 | 0.432 | -0.996 | -- | 0.0904 | 22.7 | 21.1 | 376 | -- | -- |
| 48.85 | 0.328 | 11.5 | -0.327 | 1.61 | 0.367 | -- | 0.638 | 0.146 | 22.7 | 21.4 | 115 | -- | -- |
| 49.94 | 0.329 | 11.5 | -0.492 | 1.57 | 0.387 | -- | -- | 0.0976 | 22.8 | 21.4 | 193 | -- | -- |
| 150.56 | 0.571 | 11.5 | -0.547 | -- | 0.98 | -- | -0.0656 | -0.0781 | -- | 24.8 | 765 | -- | -- |
| 52.66 | 0.34 | 11.5 | -0.423 | 1.5 | -- | -1.05 | -- | 0.193 | 22.5 | -- | -- | -- | -- |
| 57.23 | 0.354 | 11.5 | -0.38 | 1.51 | -- | -- | -- | 0.196 | 22.6 | -- | -- | -- | -- |
| 149.56 | 0.57 | 11.5 | -0.672 | -- | 1.03 | -- | -- | -0.178 | -- | 24.95 | 786 | -- | -- |
| 56.18 | 0.349 | 11.5 | -- | 1.55 | 0.315 | -- | -- | 0.168 | 22.7 | 21.36 | 189 | -- | -- |
| 197.32 | 0.656 | 11.4 | -0.353 | -- | -- | -- | -- | 0.203 | -- | -- | -- | -- | -- |
| 61.04 | 0.365 | 11.4 | -- | 1.51 | -- | -- | -- | 0.238 | 22.5 | -- | -- | -- | -- |
| 160.71 | 0.59 | 11.5 | -- | -- | 0.924 | -- | -- | -0.0657 | -- | 25.03 | 788 | -- | -- |
| 200.61 | 0.661 | 11.4 | -- | -- | -- | -- | -- | 0.242 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.45 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 2 | 43.57 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 3 | 43.77 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 4 | 43.77 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 5 | 44.37 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 4 |
| 6 | 44.59 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 12 |
| 7 | 44.61 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 8 | 13 |
| 8 | 44.70 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 20 |
| 9 | 44.80 | temperature | 20.0 | 270 | > th | dose independent | rect. | 15 | 18 |
| 13 | 44.86 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 12 | 9 |
| 24 | 44.99 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 9 |
| 27 | 45.05 | temperature | 20.0 | 720 | < th | dose independent | rect. | 18 | 7 |
| 45 | 45.22 | temperature | 20.0 | 270 | < th | dose independent | rect. | 19 | 14 |
| 48 | 45.23 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 8 | 15 |
| 57 | 45.32 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 60 | 45.36 | temperature | 20.0 | 270 | < th | dose independent | rect. | 6 | 22 |
| 75 | 45.45 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 5 |
| 78 | 45.45 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 2 | 10 |
| 79 | 45.46 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 12 |
| 97 | 45.52 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 2 | 10 |
| 100 | 45.54 | temperature | 20.0 | 270 | < th | dose independent | sin | 12 | NA |
| 109 | 45.55 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 2 | 12 |
| 119 | 45.59 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 24 | 12 |
| 166 | 45.73 | temperature | 20.0 | 720 | < th | dose independent | rect. | 21 | 2 |
| 220 | 45.86 | temperature | 20.0 | 720 | < th | dose independent | sin | 17 | NA |
| 249 | 45.91 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 250 | 45.91 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 261 | 45.93 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 277 | 45.96 | temperature | 20.0 | 720 | > th | dose independent | sin | 19 | NA |
| 284 | 45.97 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 7 |
| 293 | 45.98 | temperature | 20.0 | 270 | > th | dose independent | rect. | 2 | 23 |
| 319 | 46.01 | temperature | 20.0 | 270 | > th | dose independent | sin | 15 | NA |
| 332 | 46.02 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 18 | 3 |
| 345 | 46.04 | temperature | 20.0 | 720 | < th | dose independent | rect. | 8 | 15 |
| 353 | 46.05 | temperature | 20.0 | 720 | > th | dose independent | rect. | 8 | 17 |
| 356 | 46.05 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 21 | 14 |
| 364 | 46.06 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 5 | 2 |
| 389 | 46.10 | temperature | 20.0 | 270 | > th | dose independent | sin | 11 | NA |
| 400 | 46.11 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 20 | 8 |
| 408 | 46.13 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 5 | NA |
| 424 | 46.15 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 23 |
| 429 | 46.16 | temperature | 20.0 | 270 | > th | dose independent | no | NA | NA |
| 430 | 46.16 | temperature | 20.0 | 270 | < th | dose independent | no | NA | NA |
| 438 | 46.16 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 11 |
| 452 | 46.18 | temperature | 20.0 | 720 | < th | dose independent | rect. | 8 | 17 |
| 453 | 46.18 | temperature | 20.0 | 720 | > th | dose independent | rect. | 7 | 19 |
| 469 | 46.21 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 475 | 46.21 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 495 | 46.23 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 497 | 46.24 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 506 | 46.25 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 525 | 46.27 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 9 |
| 539 | 46.28 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 6 | NA |
| 542 | 46.29 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 7 |
| 553 | 46.30 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 5 |
| 579 | 46.30 | temperature | 20.0 | 720 | < th | dose independent | rect. | 8 | 13 |
| 589 | 46.31 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 590 | 46.31 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 604 | 46.31 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 21 | 4 |
| 608 | 46.32 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 641 | 46.33 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 668 | 46.35 | wind | 9.0 | 4320 | > th | dose independent | rect. | 18 | 3 |
| 669 | 46.35 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 683 | 46.35 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 6 | 22 |
| 717 | 46.39 | humidity | 80.0 | 1440 | < th | dose independent | sin | 5 | NA |
| 718 | 46.39 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 836 | 46.44 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 4 |
| 841 | 46.44 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 4 |
| 892 | 46.48 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 894 | 46.48 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 897 | 46.48 | temperature | 20.0 | 720 | > th | dose independent | rect. | 13 | 14 |
| 908 | 46.49 | humidity | 80.0 | 1440 | > th | dose independent | sin | 5 | NA |
| 917 | 46.49 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 10 |
| 924 | 46.50 | temperature | 20.0 | 720 | > th | dose independent | rect. | 15 | 12 |
| 928 | 46.50 | temperature | 20.0 | 270 | < th | dose independent | rect. | 1 | 23 |
| 930 | 46.50 | temperature | 20.0 | 270 | < th | dose dependent | sin | 16 | NA |
| 943 | 46.51 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 960 | 46.52 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 984 | 46.54 | temperature | 20.0 | 270 | < th | dose dependent | sin | 21 | NA |