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Os04g0290400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.82 (0.0277) R2 : 0.65
β1 : -1.81 (0.101) R2dD : 0.254 R2D : 0.293
β2 : 1.44 (0.071) R2dC : 0.317 R2C : 0.302
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.43 (0.059) R2dN8 : 0.0546 R2N8 : 0.0758
σ : 0.519
deviance : 123.04
__
_____
C
peak time of C : 19.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
110.29 0.493 6.84 -1.86 1.39 1 -0.965 0.238 0.356 20.3 40.17 257 -- --
110.33 0.489 6.84 -1.86 1.39 1.01 -0.977 -- 0.356 20.3 40.17 256 -- --
112.55 0.494 6.84 -1.81 1.42 0.921 -- 0.645 0.367 20.2 40.17 224 -- --
112.95 0.495 6.84 -1.82 1.42 0.933 -- -- 0.357 20.2 40.18 224 -- --
153.51 0.577 6.78 -1.64 -- 1.48 -- 1.53 0.444 -- 5.27 898 -- --
120.73 0.515 6.82 -1.83 1.44 -- -0.91 -- 0.431 19.6 -- -- -- --
123.04 0.519 6.82 -1.81 1.44 -- -- -- 0.43 19.5 -- -- -- --
142.97 0.557 6.81 -1.85 -- 1.73 -- -- 0.333 -- 4.47 880 -- --
196.71 0.653 6.78 -- 1.49 1.04 -- -- 0.632 19.9 49.57 154 -- --
233.67 0.714 6.79 -1.83 -- -- -- -- 0.408 -- -- -- -- --
209.12 0.676 6.77 -- 1.45 -- -- -- 0.631 19.4 -- -- -- --
229.58 0.706 6.78 -- -- 1.68 -- -- 0.501 -- 6.987 868 -- --
321.86 0.837 6.74 -- -- -- -- -- 0.61 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 96.58 temperature 30.0 90 < th dose independent rect. 4 8
3 98.61 radiation 40.0 90 < th dose independent rect. 4 8
5 99.53 temperature 20.0 270 > th dose independent rect. 8 8
9 100.27 precipitation 0.1 30 < th dose independent rect. 4 8
10 100.27 precipitation 0.1 30 < th dose dependent rect. 4 8
12 100.35 temperature 10.0 30 > th dose independent rect. 4 8
14 100.35 atmosphere 995.0 30 > th dose independent rect. 4 8
15 100.35 atmosphere 1015.0 30 < th dose independent rect. 4 8
16 100.35 temperature 10.0 30 > th dose independent rect. 12 16
25 100.74 wind 9.0 30 < th dose independent rect. 4 8
26 100.94 precipitation 0.1 30 < th dose independent rect. 12 16
27 100.94 precipitation 0.1 30 < th dose dependent rect. 12 16
28 101.02 atmosphere 995.0 30 > th dose independent rect. 12 16
30 101.32 wind 9.0 30 < th dose independent rect. 12 16
33 101.48 temperature 30.0 270 < th dose independent rect. 2 9
48 101.88 humidity 50.0 30 > th dose independent rect. 4 8
49 101.90 humidity 90.0 270 < th dose independent rect. 8 8
50 101.99 humidity 50.0 30 > th dose independent rect. 12 16
51 101.99 atmosphere 1015.0 30 < th dose independent rect. 12 16
53 102.03 humidity 50.0 90 > th dose dependent rect. 4 8
56 102.12 temperature 10.0 270 > th dose dependent rect. 8 8
60 102.34 radiation 40.0 270 < th dose dependent rect. 3 8
66 102.49 radiation 40.0 270 < th dose independent rect. 2 9
69 102.54 temperature 10.0 1440 > th dose independent rect. 5 8
72 102.54 atmosphere 995.0 1440 > th dose independent rect. 5 8
73 102.54 temperature 10.0 1440 > th dose independent rect. 13 16
79 102.63 wind 9.0 270 < th dose independent rect. 4 17
84 102.69 temperature 15.0 270 > th dose independent rect. 22 17
90 102.93 wind 9.0 90 < th dose dependent rect. 4 17
91 102.95 radiation 40.0 270 < th dose independent rect. 3 19
92 102.97 humidity 90.0 43200 < th dose independent rect. 24 1
96 103.05 wind 7.0 270 < th dose independent rect. 15 7
98 103.07 humidity 80.0 43200 > th dose dependent rect. 20 6
99 103.08 precipitation 0.1 270 < th dose independent rect. 4 17
100 103.08 precipitation 0.1 270 < th dose dependent rect. 4 17
102 103.09 humidity 80.0 43200 > th dose dependent rect. 21 4
104 103.10 temperature 15.0 270 > th dose independent rect. 23 15
108 103.13 wind 9.0 90 < th dose dependent rect. 4 19
109 103.15 temperature 10.0 270 > th dose independent rect. 21 7
110 103.15 temperature 30.0 270 < th dose independent rect. 21 7
111 103.15 humidity 50.0 270 > th dose independent rect. 21 7
114 103.15 atmosphere 995.0 270 > th dose independent rect. 21 7
115 103.15 radiation 1.0 270 < th dose independent rect. 21 7
120 103.15 temperature 10.0 270 > th dose independent rect. 4 17
121 103.15 radiation 1.0 270 < th dose dependent rect. 21 7
126 103.18 radiation 40.0 270 < th dose independent rect. 2 21
129 103.19 humidity 80.0 43200 > th dose dependent rect. 18 10
131 103.20 humidity 80.0 43200 > th dose dependent rect. 19 8
132 103.21 wind 9.0 270 < th dose independent rect. 21 7
137 103.25 radiation 30.0 14400 < th dose independent rect. 17 9
157 103.55 radiation 40.0 90 < th dose independent rect. 4 21
160 103.58 humidity 70.0 14400 > th dose independent rect. 21 2
166 103.64 precipitation 0.1 270 < th dose independent rect. 21 7
167 103.64 precipitation 0.1 270 < th dose dependent rect. 21 7
175 103.72 atmosphere 1015.0 270 < th dose independent rect. 4 17
177 103.74 temperature 25.0 90 < th dose independent rect. 23 5
202 103.96 humidity 50.0 90 > th dose dependent rect. 23 5
205 104.00 wind 5.0 90 < th dose independent rect. 4 17
206 104.00 radiation 40.0 270 < th dose dependent rect. 4 17
207 104.00 radiation 40.0 270 < th dose dependent rect. 3 19
210 104.03 wind 7.0 270 < th dose independent rect. 16 16
216 104.08 wind 9.0 90 < th dose dependent rect. 4 8
225 104.17 temperature 25.0 90 < th dose independent rect. 1 3
239 104.25 humidity 50.0 270 > th dose dependent rect. 21 6
241 104.26 wind 5.0 90 < th dose independent rect. 4 19
268 104.33 humidity 90.0 43200 < th dose independent rect. 21 8
273 104.38 humidity 70.0 14400 < th dose independent rect. 21 1
284 104.42 temperature 30.0 30 < th dose independent rect. 12 16
293 104.45 humidity 60.0 14400 > th dose dependent rect. 4 3
294 104.45 radiation 40.0 270 < th dose dependent rect. 2 21
300 104.48 atmosphere 1015.0 270 < th dose independent rect. 21 7
304 104.52 temperature 30.0 90 < th dose dependent rect. 4 8
310 104.54 humidity 90.0 14400 < th dose dependent rect. 5 2
312 104.56 humidity 80.0 43200 > th dose dependent sin 12 NA
316 104.57 radiation 40.0 90 < th dose independent rect. 12 16
325 104.61 humidity 70.0 14400 < th dose dependent rect. 20 11
327 104.63 humidity 60.0 14400 > th dose independent rect. 5 3
328 104.64 humidity 90.0 43200 > th dose independent rect. 24 3
329 104.64 humidity 50.0 30 > th dose dependent rect. 12 16
330 104.65 temperature 15.0 90 > th dose independent rect. 23 5
339 104.68 wind 9.0 270 < th dose dependent rect. 15 6
341 104.69 precipitation 0.1 270 < th dose independent rect. 2 9
342 104.69 precipitation 0.1 270 < th dose dependent rect. 2 9
358 104.76 radiation 1.0 30 < th dose dependent sin 7 NA
364 104.79 radiation 1.0 10 > th dose independent rect. 18 18
366 104.80 atmosphere 1000.0 30 > th dose independent rect. 1 3
370 104.82 humidity 90.0 43200 > th dose independent rect. 1 1
374 104.84 radiation 1.0 30 < th dose independent sin 7 NA
403 104.87 humidity 60.0 43200 < th dose dependent rect. 18 1
407 104.88 atmosphere 1015.0 90 < th dose independent rect. 23 5
436 104.91 precipitation 0.1 270 < th dose independent rect. 15 7
437 104.91 precipitation 0.1 270 < th dose dependent rect. 15 7
450 104.95 radiation 20.0 14400 < th dose independent rect. 17 14
452 104.96 radiation 1.0 30 > th dose independent sin 7 NA
453 104.96 radiation 1.0 10 > th dose independent rect. 5 7
465 104.97 humidity 70.0 14400 < th dose dependent rect. 20 2
497 105.00 atmosphere 995.0 270 > th dose independent rect. 22 17
510 105.06 wind 9.0 270 < th dose independent rect. 2 21
511 105.07 temperature 10.0 270 > th dose independent rect. 15 7
513 105.08 radiation 20.0 14400 < th dose independent rect. 17 6
527 105.14 temperature 15.0 14400 > th dose independent rect. 8 5
529 105.14 temperature 15.0 270 > th dose independent rect. 9 18
561 105.21 wind 9.0 270 < th dose independent rect. 22 17
562 105.21 precipitation 0.1 270 < th dose independent rect. 2 21
564 105.21 atmosphere 995.0 30 > th dose dependent rect. 4 8
566 105.21 temperature 10.0 270 > th dose dependent rect. 22 17
568 105.21 precipitation 0.1 270 < th dose dependent rect. 2 21
571 105.22 humidity 70.0 14400 < th dose independent rect. 20 11
574 105.23 radiation 1.0 90 < th dose dependent rect. 21 19
578 105.26 radiation 40.0 270 < th dose independent rect. 15 7
582 105.26 radiation 10.0 10 < th dose dependent rect. 22 19
586 105.29 temperature 15.0 14400 < th dose independent rect. 8 4
594 105.31 temperature 10.0 270 > th dose independent rect. 2 9
595 105.31 atmosphere 995.0 270 > th dose independent rect. 2 9
596 105.31 atmosphere 1015.0 270 < th dose independent rect. 2 9
599 105.31 temperature 15.0 14400 < th dose dependent rect. 4 4
603 105.32 humidity 60.0 14400 > th dose independent rect. 19 13
606 105.32 wind 9.0 270 < th dose dependent rect. 14 8
610 105.33 humidity 50.0 270 > th dose independent rect. 10 17
611 105.33 atmosphere 1015.0 270 < th dose independent rect. 22 17
612 105.33 radiation 1.0 14400 < th dose dependent rect. 9 1
613 105.33 humidity 60.0 30 > th dose dependent rect. 1 3
616 105.34 wind 1.0 270 > th dose independent rect. 15 7
619 105.35 radiation 20.0 14400 < th dose independent rect. 5 2
622 105.35 temperature 15.0 14400 < th dose dependent rect. 3 6
626 105.36 humidity 70.0 14400 > th dose independent rect. 20 11
642 105.37 radiation 1.0 90 < th dose independent rect. 21 19
654 105.39 wind 5.0 30 < th dose independent rect. 4 21
656 105.39 temperature 15.0 14400 < th dose dependent rect. 4 1
666 105.41 atmosphere 1000.0 270 > th dose independent rect. 23 3
668 105.41 atmosphere 1010.0 270 < th dose independent rect. 8 8
706 105.45 radiation 10.0 10 < th dose dependent rect. 22 16
711 105.46 atmosphere 995.0 30 > th dose dependent rect. 12 16
725 105.48 wind 9.0 270 < th dose independent rect. 2 9
742 105.50 temperature 15.0 14400 < th dose dependent sin 4 NA
745 105.51 temperature 15.0 270 > th dose independent rect. 23 3
754 105.52 humidity 50.0 270 > th dose independent rect. 23 3
758 105.52 radiation 1.0 270 < th dose independent rect. 23 3
765 105.52 temperature 10.0 270 > th dose independent rect. 2 21
766 105.52 radiation 1.0 270 < th dose dependent rect. 23 3
773 105.53 humidity 90.0 43200 > th dose independent rect. 23 6
781 105.54 wind 9.0 270 < th dose independent rect. 23 3
789 105.55 precipitation 0.1 270 < th dose independent rect. 23 3
791 105.55 humidity 50.0 270 > th dose dependent rect. 23 3
792 105.55 precipitation 0.1 270 < th dose dependent rect. 23 3
832 105.58 humidity 50.0 43200 < th dose dependent rect. 16 3
847 105.59 temperature 15.0 14400 < th dose dependent rect. 19 15
924 105.62 temperature 15.0 14400 > th dose independent rect. 21 2
943 105.62 temperature 15.0 14400 < th dose dependent rect. 8 22
963 105.63 wind 9.0 30 < th dose independent rect. 4 21
965 105.63 temperature 15.0 14400 < th dose dependent no NA NA
995 105.64 atmosphere 995.0 270 > th dose independent rect. 4 17