Os04g0271000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to NAD-dependent deacetylase sirtuin-7 (EC 3.5.1.-) (SIR2-like protein 7). Splice isoform 2.
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Os04g0271000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to NAD-dependent deacetylase sirtuin-7 (EC 3.5.1.-) (SIR2-like protein 7). Splice isoform 2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.22 | 0.258 | 10.9 | -1.4 | 0.926 | 0.484 | 0.68 | 1.49 | -0.0964 | 5.78 | 19.65 | 1253 | -- | -- |
| 33.86 | 0.271 | 10.8 | -1.14 | 0.916 | 0.26 | 0.743 | -- | -0.0425 | 5.76 | 20.5 | 1636 | -- | -- |
| 31.26 | 0.26 | 10.9 | -1.38 | 0.927 | 0.445 | -- | 1.32 | -0.0952 | 5.73 | 19.99 | 1247 | -- | -- |
| 34.41 | 0.273 | 10.8 | -1.17 | 0.931 | 0.225 | -- | -- | -0.0455 | 5.82 | 20.56 | 1319 | -- | -- |
| 73.46 | 0.399 | 10.9 | -1.35 | -- | 0.533 | -- | 1.21 | -0.0544 | -- | 20 | 494 | -- | -- |
| 34.66 | 0.276 | 10.8 | -1.28 | 0.92 | -- | 0.612 | -- | -0.0964 | 5.9 | -- | -- | -- | -- |
| 35.57 | 0.279 | 10.8 | -1.27 | 0.923 | -- | -- | -- | -0.099 | 5.84 | -- | -- | -- | -- |
| 52.39 | 0.337 | 10.8 | -1.08 | -- | 0.606 | -- | -- | 0.106 | -- | 25.9 | 347 | -- | -- |
| 41.95 | 0.302 | 10.7 | -- | 0.916 | 0.908 | -- | -- | 0.337 | 5.84 | 20.56 | 47520 | -- | -- |
| 79.77 | 0.417 | 10.9 | -1.25 | -- | -- | -- | -- | -0.0775 | -- | -- | -- | -- | -- |
| 78.35 | 0.414 | 10.8 | -- | 0.904 | -- | -- | -- | 0.0428 | 5.9 | -- | -- | -- | -- |
| 82.22 | 0.422 | 10.8 | -- | -- | 0.749 | -- | -- | 0.274 | -- | 26 | 363 | -- | -- |
| 120.7 | 0.513 | 10.8 | -- | -- | -- | -- | -- | 0.0607 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.09 | temperature | 30 | 30 | < th | dose independent | rect. | 4 | 18 |
| 6 | 29.71 | temperature | 30 | 270 | < th | dose independent | rect. | 1 | 20 |
| 16 | 30.00 | temperature | 30 | 30 | < th | dose independent | rect. | 7 | 15 |
| 29 | 30.18 | temperature | 30 | 10 | < th | dose independent | rect. | 10 | 12 |
| 30 | 30.18 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 13 |
| 32 | 30.20 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 13 |
| 36 | 30.21 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 11 |
| 46 | 30.23 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |
| 55 | 30.24 | temperature | 20 | 1440 | > th | dose independent | sin | 11 | NA |
| 56 | 30.24 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 8 |
| 77 | 30.25 | temperature | 10 | 270 | > th | dose dependent | rect. | 9 | 16 |
| 87 | 30.27 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 89 | 30.27 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 8 |
| 137 | 30.32 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 2 |
| 143 | 30.33 | temperature | 20 | 1440 | < th | dose independent | rect. | 24 | 4 |
| 171 | 30.34 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 20 |
| 190 | 30.35 | temperature | 20 | 1440 | > th | dose independent | rect. | 12 | 20 |
| 303 | 30.42 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 22 |
| 313 | 30.42 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 23 |
| 335 | 30.43 | temperature | 20 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 338 | 30.43 | temperature | 20 | 1440 | < th | dose independent | rect. | 24 | 23 |
| 339 | 30.43 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 1 |
| 341 | 30.44 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 351 | 30.45 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 367 | 30.45 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 368 | 30.45 | temperature | 20 | 1440 | < th | dose independent | rect. | 7 | 23 |
| 384 | 30.46 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 424 | 30.49 | temperature | 30 | 30 | < th | dose independent | sin | 23 | NA |
| 485 | 30.53 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 526 | 30.57 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 17 |
| 535 | 30.58 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 15 |
| 557 | 30.60 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 647 | 30.70 | wind | 3 | 43200 | < th | dose dependent | rect. | 23 | 4 |
| 659 | 30.71 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 11 |
| 701 | 30.75 | temperature | 30 | 30 | < th | dose dependent | rect. | 4 | 18 |
| 720 | 30.77 | temperature | 25 | 270 | > th | dose dependent | rect. | 6 | 10 |
| 781 | 30.82 | humidity | 60 | 30 | > th | dose independent | rect. | 4 | 18 |
| 788 | 30.82 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 9 |
| 793 | 30.83 | temperature | 30 | 30 | < th | dose independent | rect. | 4 | 13 |
| 797 | 30.83 | humidity | 60 | 270 | > th | dose independent | rect. | 1 | 20 |
| 815 | 30.84 | temperature | 30 | 90 | > th | dose independent | rect. | 18 | 23 |
| 831 | 30.84 | temperature | 10 | 270 | > th | dose dependent | rect. | 19 | 22 |
| 854 | 30.86 | temperature | 25 | 270 | > th | dose dependent | sin | 3 | NA |
| 864 | 30.87 | temperature | 20 | 1440 | > th | dose independent | sin | 0 | NA |
| 865 | 30.87 | temperature | 20 | 1440 | < th | dose independent | sin | 0 | NA |
| 867 | 30.87 | temperature | 20 | 720 | < th | dose independent | rect. | 6 | 1 |
| 893 | 30.88 | temperature | 25 | 1440 | < th | dose dependent | sin | 8 | NA |
| 900 | 30.88 | temperature | 10 | 10 | > th | dose dependent | rect. | 22 | 22 |
| 901 | 30.89 | humidity | 60 | 270 | > th | dose independent | rect. | 11 | 10 |
| 913 | 30.90 | temperature | 20 | 1440 | < th | dose dependent | sin | 12 | NA |
| 941 | 30.91 | humidity | 60 | 270 | > th | dose independent | rect. | 24 | 22 |
| 942 | 30.91 | temperature | 30 | 10 | < th | dose independent | rect. | 1 | 23 |