Os04g0235600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I).
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Os04g0235600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.53 | 0.369 | 15.9 | -0.54 | 0.366 | -1.32 | 0.461 | 1.43 | -0.456 | 22.9 | 21.52 | 60 | -- | -- |
| 62.91 | 0.369 | 16 | -0.775 | 0.369 | -1.26 | 0.221 | -- | -0.511 | 22.9 | 20.91 | 55 | -- | -- |
| 62.07 | 0.367 | 15.9 | -0.595 | 0.4 | -1.34 | -- | 1.24 | -0.471 | 22.2 | 22.16 | 88 | -- | -- |
| 63.03 | 0.37 | 16 | -0.791 | 0.356 | -1.28 | -- | -- | -0.52 | 22.6 | 21 | 53 | -- | -- |
| 67.57 | 0.385 | 15.9 | -0.609 | -- | -1.52 | -- | 0.976 | -0.448 | -- | 21.69 | 30 | -- | -- |
| 87.93 | 0.44 | 16 | -1.05 | 0.716 | -- | 0.521 | -- | -0.733 | 1.2 | -- | -- | -- | -- |
| 89.04 | 0.442 | 16 | -1.07 | 0.715 | -- | -- | -- | -0.736 | 1.15 | -- | -- | -- | -- |
| 68 | 0.386 | 15.9 | -0.756 | -- | -1.51 | -- | -- | -0.485 | -- | 20.8 | 10 | -- | -- |
| 78.22 | 0.412 | 15.9 | -- | 0.355 | -1.52 | -- | -- | -0.395 | 21.4 | 20.6 | 80 | -- | -- |
| 120.74 | 0.513 | 16 | -1.04 | -- | -- | -- | -- | -0.721 | -- | -- | -- | -- | -- |
| 118.97 | 0.51 | 16 | -- | 0.697 | -- | -- | -- | -0.617 | 1.09 | -- | -- | -- | -- |
| 82.23 | 0.422 | 15.9 | -- | -- | -1.65 | -- | -- | -0.374 | -- | 20.6 | 11 | -- | -- |
| 149.18 | 0.57 | 16 | -- | -- | -- | -- | -- | -0.606 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.57 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 2 | 60.79 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 5 | 61.20 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 9 |
| 10 | 61.43 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 8 |
| 11 | 61.51 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 12 | 61.51 | temperature | 20 | 90 | > th | dose dependent | rect. | 24 | 23 |
| 19 | 61.67 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 20 |
| 20 | 61.69 | temperature | 25 | 4320 | > th | dose independent | rect. | 10 | 2 |
| 22 | 61.69 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 21 |
| 23 | 61.70 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 26 | 61.72 | temperature | 20 | 10 | > th | dose dependent | rect. | 24 | 23 |
| 33 | 61.87 | temperature | 25 | 4320 | < th | dose independent | rect. | 10 | 2 |
| 51 | 62.08 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 3 |
| 52 | 62.09 | radiation | 40 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 67 | 62.26 | radiation | 20 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 78 | 62.31 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 83 | 62.34 | temperature | 25 | 4320 | > th | dose independent | rect. | 4 | 19 |
| 94 | 62.40 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 20 |
| 107 | 62.45 | temperature | 25 | 4320 | < th | dose independent | rect. | 4 | 19 |
| 115 | 62.47 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 17 |
| 123 | 62.49 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 18 |
| 130 | 62.51 | temperature | 25 | 4320 | > th | dose independent | rect. | 4 | 9 |
| 151 | 62.54 | temperature | 20 | 90 | > th | dose dependent | no | NA | NA |
| 166 | 62.60 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 172 | 62.60 | temperature | 20 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 178 | 62.62 | temperature | 25 | 1440 | < th | dose independent | sin | 14 | NA |
| 183 | 62.63 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 7 |
| 187 | 62.64 | temperature | 25 | 4320 | > th | dose independent | rect. | 10 | 13 |
| 206 | 62.67 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 212 | 62.67 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 222 | 62.68 | temperature | 25 | 4320 | < th | dose independent | rect. | 4 | 9 |
| 294 | 62.76 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 7 |
| 298 | 62.77 | temperature | 25 | 4320 | < th | dose independent | rect. | 10 | 14 |
| 303 | 62.77 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 16 |
| 312 | 62.78 | temperature | 25 | 4320 | > th | dose dependent | rect. | 17 | 21 |
| 317 | 62.79 | temperature | 25 | 4320 | > th | dose independent | rect. | 10 | 23 |
| 328 | 62.81 | temperature | 25 | 4320 | > th | dose independent | no | NA | NA |
| 343 | 62.83 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 350 | 62.83 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 23 |
| 352 | 62.83 | temperature | 25 | 4320 | > th | dose dependent | rect. | 11 | 22 |
| 354 | 62.84 | temperature | 25 | 1440 | > th | dose independent | sin | 15 | NA |
| 363 | 62.84 | temperature | 25 | 4320 | > th | dose dependent | rect. | 13 | 21 |
| 370 | 62.85 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 23 |
| 376 | 62.86 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 383 | 62.86 | temperature | 20 | 1440 | > th | dose dependent | sin | 12 | NA |
| 402 | 62.89 | temperature | 25 | 4320 | > th | dose independent | sin | 21 | NA |
| 411 | 62.90 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 430 | 62.92 | temperature | 25 | 4320 | < th | dose independent | no | NA | NA |
| 435 | 62.92 | temperature | 25 | 4320 | < th | dose independent | rect. | 10 | 23 |
| 436 | 62.92 | temperature | 25 | 4320 | > th | dose dependent | no | NA | NA |
| 438 | 62.92 | temperature | 25 | 4320 | > th | dose dependent | rect. | 24 | 22 |
| 439 | 62.92 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 23 |
| 451 | 62.93 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 4 |
| 454 | 62.93 | temperature | 25 | 4320 | > th | dose dependent | rect. | 11 | 18 |
| 459 | 62.93 | temperature | 25 | 4320 | > th | dose dependent | rect. | 3 | 23 |
| 486 | 62.95 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 497 | 62.95 | temperature | 25 | 4320 | > th | dose dependent | sin | 16 | NA |
| 523 | 62.96 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 23 |
| 525 | 62.96 | temperature | 25 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 576 | 62.98 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 13 |
| 589 | 62.99 | radiation | 40 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 592 | 62.99 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 23 |
| 604 | 63.00 | temperature | 25 | 4320 | < th | dose independent | sin | 20 | NA |
| 611 | 63.00 | temperature | 25 | 4320 | > th | dose dependent | rect. | 11 | 12 |
| 613 | 63.00 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 17 |
| 731 | 63.06 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 811 | 63.13 | radiation | 20 | 43200 | < th | dose independent | sin | 11 | NA |
| 845 | 63.15 | radiation | 1 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 923 | 63.20 | temperature | 25 | 4320 | > th | dose dependent | rect. | 15 | 6 |
| 924 | 63.20 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 10 |