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Os04g0204300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.66 (0.0188) R2 : 0.429
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.732 (0.0395) R2dN8 : 0.554 R2N8 : 0.429
σ : 0.354
deviance : 57.41
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
41.15 0.301 8.65 0.213 0.533 0.291 -0.0476 -0.199 -0.712 13.4 3 33 -- --
41.28 0.299 8.65 0.2 0.531 0.29 0.0228 -- -0.71 13.4 2.982 25 -- --
41.16 0.299 8.65 0.211 0.529 0.286 -- -0.167 -0.713 13.4 2.905 25 -- --
41.28 0.299 8.65 0.207 0.526 0.288 -- -- -0.708 13.4 2.9 25 -- --
54.99 0.345 8.65 0.288 -- 0.102 -- 0.0349 -0.71 -- 10.5 149 -- --
44.9 0.314 8.64 0.311 0.402 -- -0.0193 -- -0.694 11.8 -- -- -- --
44.9 0.314 8.64 0.31 0.402 -- -- -- -0.694 11.8 -- -- -- --
54.13 0.343 8.65 0.287 -- 0.455 -- -- -0.717 -- 10.69 628 -- --
42.34 0.303 8.65 -- 0.536 0.323 -- -- -0.731 13.4 2.9 28 -- --
55.07 0.347 8.65 0.298 -- -- -- -- -0.699 -- -- -- -- --
47.43 0.322 8.65 -- 0.398 -- -- -- -0.728 11.7 -- -- -- --
55.98 0.348 8.66 -- -- 0.366 -- -- -0.743 -- 10.83 662 -- --
57.41 0.354 8.66 -- -- -- -- -- -0.732 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 38.74 wind 3 30 < th dose independent rect. 6 20
5 39.58 wind 5 30 < th dose dependent rect. 6 19
14 39.98 humidity 80 43200 > th dose dependent rect. 7 2
16 40.04 humidity 90 43200 < th dose independent rect. 7 1
19 40.07 humidity 90 43200 > th dose independent rect. 7 1
26 40.15 temperature 20 4320 > th dose independent rect. 21 1
27 40.15 wind 3 43200 < th dose dependent rect. 24 5
40 40.22 humidity 90 43200 > th dose dependent rect. 20 1
49 40.28 wind 3 43200 < th dose dependent rect. 1 3
52 40.29 humidity 90 43200 > th dose independent rect. 20 1
53 40.29 temperature 20 4320 > th dose independent rect. 20 3
55 40.30 wind 1 43200 > th dose dependent rect. 24 3
60 40.32 atmosphere 1005 43200 > th dose independent rect. 3 1
65 40.33 temperature 20 4320 < th dose independent rect. 21 1
86 40.37 humidity 80 43200 > th dose dependent rect. 6 16
93 40.39 wind 9 43200 < th dose dependent rect. 24 3
103 40.40 humidity 90 14400 > th dose dependent rect. 3 6
108 40.41 atmosphere 1005 14400 > th dose independent rect. 17 1
127 40.43 wind 3 43200 < th dose dependent rect. 2 1
134 40.44 humidity 90 14400 > th dose independent rect. 24 10
135 40.44 humidity 80 43200 > th dose independent rect. 7 13
136 40.44 wind 3 30 > th dose independent rect. 8 22
155 40.47 radiation 1 43200 > th dose independent rect. 6 1
156 40.47 atmosphere 1005 14400 < th dose independent rect. 16 2
160 40.47 humidity 80 43200 > th dose independent rect. 7 11
163 40.47 wind 3 30 > th dose independent rect. 8 19
164 40.47 wind 3 30 < th dose independent rect. 3 23
165 40.47 radiation 1 4320 < th dose dependent rect. 6 1
175 40.48 radiation 1 43200 < th dose independent rect. 6 1
176 40.48 humidity 80 43200 > th dose independent rect. 9 2
180 40.48 humidity 80 43200 > th dose dependent sin 0 NA
186 40.49 radiation 1 43200 > th dose independent rect. 4 3
188 40.49 humidity 90 14400 > th dose independent rect. 3 5
198 40.49 wind 9 14400 > th dose dependent rect. 10 1
208 40.50 wind 9 43200 < th dose independent rect. 18 1
210 40.50 atmosphere 1005 43200 < th dose independent rect. 2 2
211 40.50 radiation 1 43200 < th dose independent rect. 4 3
265 40.53 wind 3 30 < th dose independent rect. 9 16
287 40.54 humidity 90 43200 < th dose independent rect. 4 10
364 40.58 wind 3 30 < th dose independent rect. 6 12
365 40.58 humidity 90 14400 > th dose independent rect. 20 12
366 40.58 humidity 80 43200 < th dose independent rect. 8 12
382 40.58 radiation 10 10 < th dose dependent rect. 1 23
383 40.59 humidity 80 43200 > th dose independent sin 22 NA
386 40.59 humidity 90 43200 < th dose independent rect. 19 2
400 40.59 humidity 90 43200 < th dose independent rect. 4 17
402 40.59 humidity 90 14400 > th dose dependent sin 5 NA
403 40.59 humidity 90 1440 > th dose dependent rect. 6 1
408 40.59 humidity 90 14400 > th dose dependent rect. 1 16
411 40.60 humidity 90 14400 > th dose independent sin 7 NA
418 40.60 humidity 90 14400 < th dose independent rect. 24 10
424 40.60 wind 3 30 > th dose independent rect. 5 22
436 40.61 wind 9 43200 > th dose independent rect. 18 1
437 40.61 wind 3 43200 < th dose independent rect. 24 4
466 40.62 atmosphere 1005 14400 > th dose independent rect. 14 4
548 40.64 wind 9 30 < th dose dependent rect. 6 12
604 40.66 humidity 80 43200 > th dose independent rect. 12 9
647 40.67 radiation 40 4320 < th dose independent rect. 8 1
648 40.67 wind 9 14400 > th dose independent rect. 9 2
685 40.67 humidity 70 1440 > th dose dependent rect. 20 14
694 40.68 humidity 80 43200 < th dose independent rect. 12 9
702 40.68 radiation 40 4320 < th dose independent rect. 17 16
703 40.68 radiation 30 4320 > th dose independent rect. 16 17
721 40.69 radiation 30 4320 > th dose independent rect. 7 2
763 40.69 wind 9 14400 > th dose dependent rect. 6 5
777 40.70 radiation 1 43200 > th dose independent sin 8 NA
779 40.70 radiation 1 43200 < th dose independent sin 8 NA
826 40.71 humidity 80 43200 < th dose independent sin 23 NA
873 40.72 humidity 80 43200 < th dose independent rect. 9 5
882 40.72 radiation 40 4320 < th dose independent rect. 22 11
914 40.73 wind 9 14400 < th dose independent rect. 9 2
923 40.73 wind 3 30 < th dose independent rect. 6 8
961 40.74 humidity 80 43200 > th dose independent rect. 15 2
974 40.74 radiation 40 4320 < th dose independent rect. 24 9