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Os04g0183100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.43 (0.0182) R2 : 0.175
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.376 (0.0383) R2dN8 : 0.225 R2N8 : 0.175
σ : 0.343
deviance : 54
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
34.18 0.275 9.4 -0.183 0.493 0.164 0.13 2.1 0.371 4.18 0.223 6004 -- --
35.21 0.276 9.42 -0.169 0.486 0.537 -0.0126 -- 0.381 4.22 0.999 2603 -- --
34.23 0.272 9.4 -0.184 0.494 0.166 -- 2.11 0.371 4.24 0.2258 6004 -- --
35.18 0.276 9.42 -0.154 0.494 0.55 -- -- 0.392 4.28 0.8342 2642 -- --
47.41 0.321 9.4 -0.166 -- 0.129 -- 2.28 0.379 -- 0.2735 6000 -- --
40.08 0.297 9.42 -0.00527 0.503 -- 0.198 -- 0.366 4.13 -- -- -- --
40.18 0.297 9.42 -0.00733 0.506 -- -- -- 0.364 4.22 -- -- -- --
48.38 0.324 9.42 -0.14 -- 0.583 -- -- 0.407 -- 0.8026 2627 -- --
35.72 0.278 9.41 -- 0.494 0.494 -- -- 0.405 4.28 0.8481 2633 -- --
54 0.343 9.43 0.0129 -- -- -- -- 0.378 -- -- -- -- --
40.19 0.297 9.42 -- 0.505 -- -- -- 0.365 4.22 -- -- -- --
48.84 0.325 9.42 -- -- 0.531 -- -- 0.419 -- 0.782 2601 -- --
54 0.343 9.43 -- -- -- -- -- 0.376 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 31.19 precipitation 0.1 14400 < th dose independent rect. 14 2
2 31.19 precipitation 0.1 14400 < th dose dependent rect. 14 2
3 31.34 precipitation 0.1 14400 > th dose independent rect. 14 2
4 31.34 precipitation 0.1 14400 > th dose dependent rect. 14 2
5 31.74 precipitation 0.1 14400 < th dose independent rect. 17 1
6 31.74 precipitation 0.1 14400 < th dose dependent rect. 17 1
7 31.76 precipitation 0.1 14400 > th dose independent rect. 17 1
12 31.88 precipitation 0.1 14400 < th dose independent rect. 9 8
13 31.88 precipitation 0.1 14400 < th dose dependent rect. 9 8
14 31.94 precipitation 0.1 14400 > th dose independent rect. 9 8
19 32.01 wind 3.0 14400 < th dose independent rect. 24 5
26 32.13 humidity 80.0 1440 < th dose independent rect. 11 1
31 32.18 wind 3.0 14400 < th dose independent rect. 3 1
32 32.21 humidity 80.0 1440 > th dose independent rect. 11 1
35 32.21 precipitation 0.1 14400 > th dose dependent rect. 7 10
46 32.26 precipitation 0.1 14400 > th dose dependent rect. 17 1
48 32.27 precipitation 0.1 4320 < th dose independent rect. 4 13
49 32.27 humidity 70.0 1440 > th dose dependent rect. 11 1
51 32.27 precipitation 0.1 4320 < th dose dependent rect. 4 13
55 32.29 wind 3.0 14400 > th dose independent rect. 24 6
68 32.36 precipitation 0.1 4320 > th dose dependent rect. 4 13
70 32.38 precipitation 0.1 4320 > th dose independent rect. 4 13
73 32.40 wind 3.0 14400 > th dose independent rect. 3 1
74 32.40 wind 3.0 14400 > th dose independent rect. 22 8
78 32.43 wind 3.0 14400 > th dose independent rect. 3 3
87 32.48 precipitation 0.1 4320 < th dose independent rect. 1 16
88 32.48 wind 3.0 14400 < th dose dependent rect. 24 5
89 32.48 precipitation 0.1 4320 > th dose dependent rect. 1 16
90 32.48 precipitation 0.1 4320 < th dose dependent rect. 1 16
106 32.53 wind 3.0 14400 < th dose dependent rect. 3 3
114 32.56 precipitation 0.1 4320 > th dose independent rect. 1 16
115 32.57 wind 9.0 14400 < th dose independent rect. 10 1
124 32.59 wind 3.0 14400 < th dose independent rect. 24 1
126 32.59 precipitation 0.1 14400 < th dose independent rect. 6 14
130 32.59 precipitation 0.1 14400 < th dose dependent rect. 6 14
135 32.61 precipitation 0.1 14400 > th dose independent rect. 7 13
147 32.65 precipitation 0.1 4320 < th dose independent rect. 4 2
152 32.65 wind 3.0 14400 < th dose dependent rect. 4 1
153 32.65 precipitation 0.1 4320 < th dose dependent rect. 4 2
175 32.71 precipitation 0.1 14400 > th dose independent rect. 9 11
184 32.74 wind 9.0 14400 < th dose independent rect. 7 4
192 32.76 humidity 90.0 4320 > th dose independent rect. 13 1
198 32.77 precipitation 0.1 4320 > th dose dependent rect. 4 2
201 32.78 precipitation 0.1 4320 > th dose independent rect. 4 2
226 32.81 precipitation 0.1 14400 < th dose independent rect. 12 8
228 32.81 precipitation 0.1 14400 < th dose dependent rect. 12 8
231 32.82 precipitation 0.1 14400 > th dose independent rect. 12 8
238 32.84 wind 1.0 4320 > th dose independent rect. 17 2
320 33.02 wind 1.0 14400 > th dose dependent rect. 24 6
326 33.04 wind 9.0 14400 > th dose independent rect. 10 1
329 33.04 wind 1.0 14400 > th dose dependent rect. 2 4
330 33.05 precipitation 0.1 14400 < th dose independent sin 0 NA
332 33.05 precipitation 0.1 14400 < th dose dependent sin 0 NA
350 33.08 precipitation 0.1 14400 > th dose independent sin 0 NA
398 33.18 precipitation 0.1 4320 < th dose independent sin 3 NA
403 33.18 precipitation 0.1 4320 < th dose dependent sin 3 NA
451 33.26 precipitation 0.1 4320 > th dose independent sin 3 NA
456 33.26 precipitation 0.1 14400 > th dose dependent rect. 17 3
467 33.28 wind 9.0 14400 > th dose independent rect. 7 4
477 33.28 precipitation 0.1 14400 > th dose dependent rect. 13 7
492 33.30 humidity 80.0 14400 < th dose dependent rect. 6 1
501 33.32 wind 1.0 4320 < th dose independent rect. 17 2
522 33.33 precipitation 0.1 14400 > th dose dependent rect. 6 14
525 33.34 precipitation 0.1 4320 < th dose independent rect. 1 19
531 33.34 precipitation 0.1 4320 < th dose dependent rect. 1 19
550 33.37 humidity 60.0 14400 < th dose independent rect. 14 1
559 33.38 precipitation 0.1 4320 > th dose independent rect. 1 19
569 33.40 humidity 60.0 14400 > th dose independent rect. 15 1
584 33.41 humidity 90.0 14400 > th dose dependent rect. 15 1
605 33.43 precipitation 0.1 14400 > th dose dependent rect. 15 5
609 33.43 precipitation 0.1 14400 > th dose dependent rect. 9 11
733 33.56 precipitation 0.1 14400 > th dose dependent rect. 3 17
736 33.57 precipitation 0.1 14400 > th dose dependent sin 1 NA
752 33.58 precipitation 0.1 14400 > th dose dependent rect. 24 20
777 33.60 humidity 90.0 4320 > th dose dependent rect. 7 3
808 33.62 precipitation 0.1 4320 > th dose dependent rect. 18 23
822 33.64 humidity 80.0 14400 < th dose independent rect. 13 2
831 33.65 precipitation 0.1 4320 > th dose dependent sin 4 NA
853 33.67 humidity 80.0 14400 < th dose independent rect. 5 2
870 33.69 humidity 80.0 14400 > th dose independent rect. 5 2
896 33.71 humidity 90.0 14400 > th dose dependent rect. 15 6
912 33.73 wind 3.0 14400 < th dose independent sin 9 NA
923 33.74 humidity 80.0 14400 > th dose independent rect. 10 6
954 33.76 humidity 90.0 14400 > th dose dependent rect. 19 1
955 33.76 humidity 90.0 14400 < th dose dependent rect. 14 1
987 33.79 humidity 80.0 14400 > th dose dependent rect. 13 2