Os04g0165600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase S26A, signal peptidase I family protein.
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Os04g0165600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase S26A, signal peptidase I family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.38 | 0.337 | 8.3 | 0.0551 | 0.473 | -0.939 | -0.324 | -0.74 | 0.0719 | 23.7 | 78.24 | 1188 | -- | -- |
| 51.95 | 0.336 | 8.29 | 0.108 | 0.481 | -1.01 | -0.432 | -- | 0.0894 | 23.7 | 79.57 | 1190 | -- | -- |
| 51.8 | 0.335 | 8.3 | 0.057 | 0.479 | -0.937 | -- | -0.836 | 0.0773 | 23.6 | 78.82 | 1181 | -- | -- |
| 52.76 | 0.338 | 8.29 | 0.129 | 0.486 | -1.02 | -- | -- | 0.0888 | 23.7 | 79.43 | 1189 | -- | -- |
| 60.47 | 0.362 | 8.28 | 0.0194 | -- | -0.815 | -- | -0.634 | 0.0964 | -- | 83.99 | 1498 | -- | -- |
| 73.87 | 0.403 | 8.28 | -0.0697 | 0.287 | -- | -0.585 | -- | 0.127 | 23.4 | -- | -- | -- | -- |
| 75.29 | 0.406 | 8.28 | -0.0449 | 0.292 | -- | -- | -- | 0.13 | 23 | -- | -- | -- | -- |
| 61.01 | 0.364 | 8.28 | 0.0861 | -- | -0.862 | -- | -- | 0.104 | -- | 84 | 1496 | -- | -- |
| 53.17 | 0.34 | 8.29 | -- | 0.486 | -0.998 | -- | -- | 0.0792 | 23.7 | 80.16 | 1189 | -- | -- |
| 80.58 | 0.419 | 8.27 | -0.0385 | -- | -- | -- | -- | 0.132 | -- | -- | -- | -- | -- |
| 75.35 | 0.406 | 8.28 | -- | 0.291 | -- | -- | -- | 0.135 | 23 | -- | -- | -- | -- |
| 61.18 | 0.364 | 8.28 | -- | -- | -0.855 | -- | -- | 0.102 | -- | 84.57 | 1501 | -- | -- |
| 80.62 | 0.419 | 8.27 | -- | -- | -- | -- | -- | 0.136 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.35 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 2 | 52.55 | humidity | 70 | 1440 | < th | dose dependent | sin | 12 | NA |
| 3 | 52.67 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 11 | 52.92 | humidity | 70 | 1440 | < th | dose dependent | rect. | 15 | 19 |
| 14 | 53.02 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 21 |
| 15 | 53.03 | humidity | 60 | 1440 | < th | dose independent | sin | 13 | NA |
| 16 | 53.07 | humidity | 70 | 1440 | < th | dose dependent | rect. | 15 | 17 |
| 36 | 53.13 | humidity | 60 | 1440 | > th | dose independent | sin | 13 | NA |
| 43 | 53.18 | humidity | 50 | 1440 | > th | dose dependent | rect. | 7 | 14 |
| 76 | 53.30 | humidity | 90 | 1440 | < th | dose dependent | rect. | 7 | 13 |
| 129 | 53.46 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 7 |
| 153 | 53.48 | humidity | 80 | 1440 | < th | dose dependent | sin | 18 | NA |
| 263 | 53.66 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 278 | 53.69 | humidity | 50 | 1440 | > th | dose dependent | sin | 22 | NA |
| 301 | 53.73 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 346 | 53.84 | humidity | 50 | 1440 | > th | dose independent | rect. | 15 | 2 |
| 359 | 53.88 | humidity | 50 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 387 | 53.92 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 397 | 53.94 | humidity | 60 | 1440 | < th | dose independent | rect. | 14 | 5 |
| 407 | 53.95 | humidity | 50 | 1440 | > th | dose independent | rect. | 15 | 10 |
| 424 | 53.96 | humidity | 50 | 1440 | > th | dose independent | rect. | 15 | 12 |
| 459 | 53.99 | humidity | 50 | 1440 | > th | dose independent | rect. | 15 | 5 |
| 591 | 54.14 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 5 |
| 641 | 54.19 | temperature | 30 | 1440 | > th | dose dependent | sin | 12 | NA |
| 807 | 54.36 | humidity | 50 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 816 | 54.37 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 848 | 54.39 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 9 |
| 850 | 54.40 | temperature | 25 | 1440 | > th | dose dependent | sin | 21 | NA |
| 852 | 54.40 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 7 |
| 866 | 54.42 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 13 |
| 896 | 54.44 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 13 |
| 924 | 54.45 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 17 |
| 969 | 54.48 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 16 |