Os04g0127800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0127800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 255.23 | 0.751 | 4.54 | 0.795 | 0.387 | -1.41 | 0.606 | 2.68 | -0.39 | 23.8 | 21.2 | 715 | -- | -- |
| 260.71 | 0.752 | 4.59 | 0.32 | 0.33 | -1.37 | 1.07 | -- | -0.443 | 22.6 | 20.94 | 679 | -- | -- |
| 256.64 | 0.746 | 4.53 | 0.812 | 0.395 | -1.41 | -- | 2.94 | -0.385 | 0.0712 | 21.4 | 735 | -- | -- |
| 263.17 | 0.756 | 4.6 | 0.178 | 0.394 | -1.19 | -- | -- | -0.551 | 0.778 | 20.67 | 761 | -- | -- |
| 262.93 | 0.755 | 4.56 | 0.599 | -- | -1.28 | -- | 2.4 | -0.462 | -- | 21.2 | 491 | -- | -- |
| 292.38 | 0.802 | 4.65 | -0.144 | 0.376 | -- | 0.331 | -- | -0.779 | 4.07 | -- | -- | -- | -- |
| 292.56 | 0.801 | 4.65 | -0.147 | 0.385 | -- | -- | -- | -0.781 | 4.53 | -- | -- | -- | -- |
| 265.84 | 0.759 | 4.6 | 0.116 | -- | -1.15 | -- | -- | -0.579 | -- | 20.6 | 360 | -- | -- |
| 263.9 | 0.757 | 4.61 | -- | 0.378 | -1.14 | -- | -- | -0.592 | 0.734 | 20.7 | 759 | -- | -- |
| 300.48 | 0.81 | 4.65 | -0.132 | -- | -- | -- | -- | -0.77 | -- | -- | -- | -- | -- |
| 293.13 | 0.801 | 4.64 | -- | 0.382 | -- | -- | -- | -0.764 | 4.54 | -- | -- | -- | -- |
| 266.18 | 0.76 | 4.61 | -- | -- | -1.13 | -- | -- | -0.596 | -- | 20.7 | 347 | -- | -- |
| 300.94 | 0.81 | 4.64 | -- | -- | -- | -- | -- | -0.756 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 248.91 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 20 |
| 2 | 248.96 | humidity | 90 | 43200 | > th | dose independent | rect. | 11 | 19 |
| 11 | 249.08 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 5 |
| 55 | 249.30 | humidity | 90 | 43200 | < th | dose independent | rect. | 24 | 19 |
| 90 | 249.45 | humidity | 90 | 43200 | > th | dose independent | sin | 7 | NA |
| 100 | 249.49 | wind | 7 | 43200 | < th | dose independent | rect. | 7 | 8 |
| 108 | 249.50 | humidity | 90 | 43200 | > th | dose independent | rect. | 23 | 18 |
| 125 | 249.56 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 13 |
| 134 | 249.58 | humidity | 90 | 43200 | < th | dose independent | sin | 15 | NA |
| 138 | 249.59 | humidity | 90 | 43200 | < th | dose independent | rect. | 15 | 13 |
| 142 | 249.60 | humidity | 90 | 43200 | > th | dose independent | sin | 15 | NA |
| 146 | 249.61 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 152 | 249.62 | wind | 7 | 43200 | > th | dose independent | rect. | 8 | 7 |
| 175 | 249.65 | humidity | 90 | 43200 | > th | dose independent | rect. | 1 | 10 |
| 178 | 249.66 | humidity | 90 | 43200 | > th | dose independent | rect. | 2 | 8 |
| 197 | 249.70 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 22 |
| 200 | 249.71 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 288 | 249.83 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 295 | 249.85 | humidity | 90 | 43200 | > th | dose independent | no | NA | NA |
| 303 | 249.86 | humidity | 90 | 43200 | < th | dose independent | sin | 6 | NA |
| 304 | 249.86 | humidity | 90 | 43200 | < th | dose independent | no | NA | NA |
| 398 | 250.26 | humidity | 90 | 43200 | > th | dose independent | rect. | 3 | 5 |
| 400 | 250.27 | humidity | 90 | 43200 | > th | dose dependent | rect. | 11 | 19 |
| 404 | 250.30 | humidity | 90 | 43200 | < th | dose independent | rect. | 2 | 9 |
| 421 | 250.37 | humidity | 90 | 43200 | < th | dose independent | rect. | 2 | 23 |
| 447 | 250.44 | humidity | 90 | 43200 | > th | dose dependent | rect. | 3 | 4 |
| 500 | 250.58 | humidity | 90 | 43200 | > th | dose dependent | rect. | 2 | 7 |
| 525 | 250.64 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 20 |
| 559 | 250.72 | humidity | 90 | 43200 | > th | dose dependent | sin | 15 | NA |
| 596 | 250.79 | humidity | 90 | 43200 | > th | dose dependent | sin | 7 | NA |
| 597 | 250.79 | humidity | 90 | 43200 | > th | dose dependent | no | NA | NA |
| 616 | 250.82 | wind | 3 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 625 | 250.83 | humidity | 90 | 43200 | > th | dose dependent | rect. | 2 | 23 |
| 699 | 250.96 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 15 |
| 717 | 251.00 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 15 |
| 726 | 251.03 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 2 |
| 859 | 251.50 | wind | 7 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 883 | 251.60 | humidity | 90 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 891 | 251.63 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 2 |
| 920 | 251.72 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 929 | 251.74 | wind | 7 | 43200 | < th | dose independent | sin | 2 | NA |
| 932 | 251.75 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 10 |
| 971 | 251.90 | wind | 7 | 43200 | > th | dose independent | sin | 2 | NA |