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Os04g0117100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.3 (0.00943) R2 : 0.227
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.229 (0.0198) R2dN8 : 0.293 R2N8 : 0.227
σ : 0.178
deviance : 14.46
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
11.76 0.161 12.3 0.0489 0.0362 -0.213 -0.422 -0.587 -0.225 19 79.86 820 -- --
12.24 0.163 12.3 0.0192 0.0258 -0.228 -0.245 -- -0.232 17.1 79.61 799 -- --
11.99 0.161 12.3 0.0767 0.113 -0.199 -- -0.676 -0.227 18.8 80 1126 -- --
11.82 0.16 12.3 0.0491 0.126 -0.259 -- -- -0.329 19 82.13 19702 -- --
12.36 0.164 12.3 0.0512 -- -0.313 -- -0.262 -0.243 -- 80.76 2144 -- --
13.27 0.171 12.3 0.0201 0.144 -- -0.102 -- -0.225 20.2 -- -- -- --
13.3 0.171 12.3 0.0228 0.144 -- -- -- -0.226 20.4 -- -- -- --
12.43 0.164 12.3 0.037 -- -0.334 -- -- -0.251 -- 81.15 2172 -- --
11.77 0.16 12.3 -- 0.126 -0.253 -- -- -0.327 20.1 82.01 19668 -- --
14.45 0.178 12.3 0.0219 -- -- -- -- -0.227 -- -- -- -- --
13.32 0.171 12.3 -- 0.144 -- -- -- -0.228 20.4 -- -- -- --
12.45 0.164 12.3 -- -- -0.331 -- -- -0.25 -- 80.88 2147 -- --
14.46 0.178 12.3 -- -- -- -- -- -0.229 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 11.19 wind 3 43200 < th dose dependent rect. 4 2
2 11.39 wind 1 43200 > th dose independent rect. 3 9
13 11.45 wind 1 43200 > th dose dependent rect. 5 1
19 11.49 wind 1 43200 > th dose independent rect. 23 12
23 11.51 humidity 80 4320 < th dose independent rect. 21 19
32 11.53 radiation 40 4320 > th dose dependent rect. 14 19
33 11.54 wind 1 43200 > th dose independent sin 7 NA
36 11.54 radiation 40 4320 > th dose dependent rect. 14 1
38 11.55 wind 1 14400 < th dose independent rect. 4 1
60 11.56 humidity 70 1440 > th dose dependent rect. 24 16
62 11.57 wind 1 43200 < th dose independent rect. 3 9
64 11.57 humidity 80 4320 > th dose independent rect. 21 19
67 11.58 wind 1 14400 > th dose independent rect. 4 1
75 11.59 humidity 80 4320 < th dose independent rect. 21 6
85 11.60 humidity 80 4320 > th dose independent rect. 21 7
87 11.60 humidity 80 4320 < th dose dependent rect. 20 8
88 11.60 humidity 80 1440 > th dose dependent rect. 3 13
96 11.61 wind 1 43200 > th dose independent rect. 21 14
111 11.62 wind 5 43200 < th dose dependent rect. 23 7
114 11.63 humidity 70 4320 < th dose independent rect. 11 2
128 11.64 wind 1 43200 > th dose independent rect. 1 6
129 11.64 wind 1 43200 < th dose independent rect. 1 6
153 11.66 wind 1 43200 > th dose independent rect. 23 6
157 11.66 humidity 80 4320 < th dose independent rect. 21 15
163 11.66 humidity 80 720 < th dose independent rect. 19 22
164 11.66 wind 5 43200 < th dose dependent rect. 7 1
170 11.66 wind 5 43200 < th dose dependent rect. 23 9
171 11.66 wind 1 43200 < th dose dependent rect. 3 10
186 11.67 humidity 80 1440 > th dose dependent sin 2 NA
190 11.67 humidity 60 4320 > th dose dependent rect. 13 1
216 11.68 humidity 80 4320 < th dose independent rect. 9 22
228 11.69 humidity 70 4320 > th dose independent rect. 11 2
234 11.69 humidity 80 4320 < th dose independent rect. 13 16
238 11.69 wind 1 43200 > th dose independent rect. 16 18
242 11.69 humidity 80 4320 < th dose independent rect. 9 20
244 11.69 humidity 80 720 > th dose independent rect. 22 22
251 11.69 wind 1 43200 > th dose dependent rect. 23 7
258 11.69 wind 1 43200 < th dose dependent rect. 2 20
263 11.70 humidity 80 4320 > th dose independent rect. 21 15
268 11.70 humidity 80 4320 > th dose independent rect. 13 18
271 11.70 wind 1 43200 > th dose dependent rect. 4 4
279 11.70 wind 1 43200 > th dose dependent rect. 23 9
283 11.71 wind 1 43200 < th dose independent rect. 3 4
291 11.71 humidity 80 4320 > th dose independent rect. 13 16
302 11.71 radiation 20 4320 < th dose dependent rect. 7 7
310 11.72 wind 1 43200 > th dose independent rect. 3 4
327 11.72 humidity 80 4320 > th dose independent rect. 9 22
333 11.72 radiation 20 4320 < th dose dependent rect. 7 4
353 11.73 wind 1 43200 > th dose independent rect. 15 16
357 11.73 humidity 80 4320 > th dose independent rect. 9 20
360 11.73 humidity 80 720 > th dose independent rect. 19 22
367 11.73 wind 1 43200 > th dose dependent rect. 7 1
377 11.73 wind 1 43200 > th dose dependent rect. 1 7
399 11.74 radiation 10 4320 < th dose independent rect. 8 4
413 11.74 humidity 80 720 < th dose independent rect. 8 23
418 11.74 wind 1 43200 > th dose dependent rect. 1 5
431 11.74 wind 1 43200 < th dose dependent rect. 3 18
436 11.74 humidity 70 720 > th dose dependent rect. 22 22
437 11.75 radiation 20 4320 < th dose independent sin 7 NA
440 11.75 wind 3 43200 < th dose independent rect. 7 1
460 11.75 humidity 80 720 < th dose independent rect. 8 21
466 11.75 radiation 20 14400 < th dose dependent rect. 13 1
494 11.76 radiation 20 4320 < th dose independent rect. 6 8
498 11.76 humidity 90 1440 < th dose independent rect. 5 11
516 11.76 radiation 20 4320 < th dose independent rect. 17 18
549 11.76 wind 1 43200 < th dose dependent rect. 2 15
557 11.76 humidity 70 720 > th dose dependent rect. 19 22
559 11.77 humidity 80 1440 > th dose independent sin 4 NA
560 11.77 humidity 80 4320 < th dose independent sin 9 NA
565 11.77 radiation 20 4320 < th dose independent rect. 6 5
614 11.77 humidity 80 4320 < th dose independent rect. 13 22
646 11.78 wind 1 43200 < th dose independent sin 6 NA
650 11.78 humidity 70 4320 > th dose independent rect. 15 1
696 11.78 humidity 80 4320 > th dose independent rect. 13 22
727 11.79 humidity 80 1440 < th dose independent sin 4 NA
757 11.79 humidity 80 720 > th dose independent rect. 6 23
763 11.79 humidity 80 720 < th dose independent rect. 21 23
765 11.79 temperature 30 14400 > th dose dependent rect. 11 1
801 11.80 wind 9 43200 < th dose independent rect. 18 1
802 11.80 radiation 10 14400 > th dose independent rect. 13 1
879 11.81 humidity 80 720 > th dose independent no NA NA
882 11.81 humidity 80 720 < th dose independent no NA NA
884 11.81 wind 1 43200 > th dose independent rect. 1 2
914 11.81 humidity 80 720 < th dose independent rect. 6 22
943 11.82 humidity 80 4320 > th dose independent sin 8 NA
946 11.82 humidity 70 4320 < th dose independent rect. 15 1
947 11.82 radiation 10 4320 > th dose independent rect. 17 1
949 11.82 radiation 10 4320 < th dose independent rect. 9 2
970 11.82 wind 1 43200 < th dose independent rect. 19 16
987 11.82 humidity 80 720 > th dose independent rect. 13 23
989 11.82 humidity 80 720 < th dose independent rect. 3 23
991 11.82 humidity 80 720 < th dose independent rect. 11 23