Os03g0862100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0862100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.12 | 0.428 | 11.4 | 0.249 | 0.505 | -0.708 | -0.249 | -1.23 | -0.297 | 19 | 70.03 | 5986 | -- | -- |
| 84.79 | 0.429 | 11.4 | 0.23 | 0.528 | -0.692 | -0.129 | -- | -0.349 | 18.9 | 72 | 7347 | -- | -- |
| 83.28 | 0.425 | 11.4 | 0.253 | 0.505 | -0.708 | -- | -1.22 | -0.298 | 19 | 70.25 | 5985 | -- | -- |
| 84.72 | 0.429 | 11.4 | 0.24 | 0.508 | -0.737 | -- | -- | -0.357 | 18.9 | 71 | 7326 | -- | -- |
| 93.55 | 0.45 | 11.4 | 0.249 | -- | -0.801 | -- | -0.9 | -0.333 | -- | 70 | 6429 | -- | -- |
| 94.24 | 0.455 | 11.4 | 0.148 | 0.526 | -- | -0.215 | -- | -0.21 | 18.9 | -- | -- | -- | -- |
| 94.36 | 0.455 | 11.4 | 0.152 | 0.526 | -- | -- | -- | -0.21 | 18.8 | -- | -- | -- | -- |
| 94.47 | 0.453 | 11.4 | 0.204 | -- | -0.895 | -- | -- | -0.364 | -- | 70.13 | 6429 | -- | -- |
| 86.11 | 0.432 | 11.4 | -- | 0.509 | -0.71 | -- | -- | -0.367 | 18.9 | 70.57 | 7320 | -- | -- |
| 108.83 | 0.487 | 11.4 | 0.141 | -- | -- | -- | -- | -0.22 | -- | -- | -- | -- | -- |
| 94.97 | 0.456 | 11.4 | -- | 0.524 | -- | -- | -- | -0.227 | 18.9 | -- | -- | -- | -- |
| 95.56 | 0.455 | 11.4 | -- | -- | -0.879 | -- | -- | -0.381 | -- | 71 | 6429 | -- | -- |
| 109.36 | 0.488 | 11.4 | -- | -- | -- | -- | -- | -0.236 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.11 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 6 |
| 2 | 81.12 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 3 | 81.44 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 6 |
| 11 | 82.12 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 12 | 82.18 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 14 | 82.23 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 25 | 82.53 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 36 | 82.95 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 47 | 83.14 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 19 | 19 |
| 72 | 83.25 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 94 | 83.49 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 16 |
| 103 | 83.53 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 104 | 83.54 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 19 | 19 |
| 110 | 83.55 | humidity | 60.0 | 4320 | > th | dose dependent | rect. | 9 | 5 |
| 115 | 83.56 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 5 | 9 |
| 117 | 83.56 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 10 | 4 |
| 189 | 83.68 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 19 | 19 |
| 190 | 83.69 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 5 | 6 |
| 218 | 83.73 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 9 | 8 |
| 223 | 83.74 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 5 | 6 |
| 238 | 83.75 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 6 | 11 |
| 251 | 83.76 | humidity | 70.0 | 4320 | < th | dose independent | sin | 2 | NA |
| 278 | 83.78 | humidity | 60.0 | 4320 | > th | dose dependent | rect. | 5 | 9 |
| 293 | 83.80 | humidity | 70.0 | 4320 | > th | dose independent | sin | 2 | NA |
| 306 | 83.80 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 336 | 83.82 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 17 |
| 348 | 83.84 | humidity | 70.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 374 | 83.87 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 8 | 5 |
| 445 | 83.94 | humidity | 70.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 464 | 83.96 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 1 | 13 |
| 625 | 84.06 | humidity | 80.0 | 14400 | < th | dose dependent | sin | 6 | NA |
| 633 | 84.07 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 655 | 84.07 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 677 | 84.08 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 10 | 23 |
| 694 | 84.10 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 717 | 84.10 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 760 | 84.12 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 6 | 5 |
| 799 | 84.14 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 11 | 22 |
| 801 | 84.14 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 9 | 23 |
| 825 | 84.15 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 895 | 84.18 | humidity | 70.0 | 4320 | > th | dose independent | no | NA | NA |
| 973 | 84.19 | humidity | 70.0 | 4320 | < th | dose independent | no | NA | NA |