Os03g0861100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0861100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 129.02 | 0.534 | 6.12 | -1.79 | 0.672 | -1.57 | -0.0176 | -0.349 | -0.166 | 4.38 | 24.4 | 241 | -- | -- |
| 128.96 | 0.529 | 6.13 | -1.81 | 0.675 | -1.53 | 0.0166 | -- | -0.177 | 4.25 | 24.41 | 208 | -- | -- |
| 128.61 | 0.528 | 6.12 | -1.78 | 0.667 | -1.57 | -- | -0.354 | -0.149 | 4.17 | 24.3 | 189 | -- | -- |
| 128.8 | 0.529 | 6.13 | -1.83 | 0.67 | -1.54 | -- | -- | -0.164 | 4.13 | 24.29 | 181 | -- | -- |
| 151.4 | 0.573 | 6.12 | -1.72 | -- | -1.33 | -- | -0.245 | -0.113 | -- | 24.1 | 291 | -- | -- |
| 162.29 | 0.597 | 6.07 | -1.45 | 0.492 | -- | -0.032 | -- | 0.1 | 4.8 | -- | -- | -- | -- |
| 162.29 | 0.597 | 6.07 | -1.45 | 0.492 | -- | -- | -- | 0.101 | 4.8 | -- | -- | -- | -- |
| 151.44 | 0.573 | 6.12 | -1.75 | -- | -1.29 | -- | -- | -0.108 | -- | 24.16 | 292 | -- | -- |
| 207.44 | 0.674 | 6.06 | -- | 0.548 | -0.802 | -- | -- | 0.147 | 4.07 | 24.24 | 164 | -- | -- |
| 175.1 | 0.618 | 6.07 | -1.43 | -- | -- | -- | -- | 0.113 | -- | -- | -- | -- | -- |
| 217.58 | 0.69 | 6.03 | -- | 0.466 | -- | -- | -- | 0.262 | 4.9 | -- | -- | -- | -- |
| 222.78 | 0.695 | 6.05 | -- | -- | -0.612 | -- | -- | 0.178 | -- | 24.07 | 11 | -- | -- |
| 229.04 | 0.706 | 6.04 | -- | -- | -- | -- | -- | 0.272 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 126.70 | humidity | 60 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 2 | 126.72 | humidity | 60 | 14400 | > th | dose independent | rect. | 18 | 14 |
| 3 | 127.11 | humidity | 60 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 5 | 127.60 | humidity | 60 | 14400 | > th | dose independent | rect. | 18 | 4 |
| 6 | 127.60 | humidity | 60 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 8 | 127.60 | humidity | 60 | 14400 | > th | dose independent | rect. | 18 | 9 |
| 12 | 127.63 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 7 |
| 16 | 127.75 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 12 |
| 22 | 127.95 | humidity | 60 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 26 | 128.13 | humidity | 50 | 14400 | < th | dose dependent | rect. | 16 | 19 |
| 28 | 128.22 | temperature | 30 | 720 | < th | dose dependent | sin | 15 | NA |
| 31 | 128.45 | humidity | 60 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 32 | 128.52 | humidity | 60 | 14400 | < th | dose dependent | rect. | 17 | 15 |
| 40 | 128.74 | humidity | 60 | 14400 | < th | dose dependent | rect. | 17 | 4 |
| 51 | 128.81 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 52 | 128.82 | temperature | 15 | 720 | > th | dose dependent | sin | 14 | NA |
| 56 | 128.88 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 62 | 129.04 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 65 | 129.13 | humidity | 50 | 14400 | < th | dose dependent | rect. | 17 | 17 |
| 67 | 129.16 | humidity | 50 | 14400 | < th | dose independent | rect. | 17 | 17 |
| 75 | 129.27 | humidity | 60 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 123 | 129.61 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 22 |
| 125 | 129.62 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 19 |
| 130 | 129.65 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 140 | 129.78 | temperature | 25 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 142 | 129.81 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 7 |
| 145 | 129.82 | temperature | 25 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 159 | 129.87 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 17 |
| 169 | 129.92 | temperature | 15 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 192 | 130.05 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 5 |
| 195 | 130.08 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 18 |
| 203 | 130.11 | temperature | 25 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 205 | 130.12 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 208 | 130.12 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 210 | 130.13 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 231 | 130.26 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 238 | 130.28 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 240 | 130.29 | temperature | 25 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 247 | 130.32 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 15 |
| 248 | 130.32 | temperature | 25 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 266 | 130.33 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 267 | 130.33 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 271 | 130.35 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 274 | 130.36 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 14 |
| 297 | 130.41 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 298 | 130.42 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 314 | 130.45 | temperature | 25 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 383 | 130.72 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 571 | 131.31 | temperature | 15 | 1440 | > th | dose dependent | sin | 21 | NA |
| 971 | 132.31 | temperature | 30 | 1440 | < th | dose dependent | rect. | 10 | 10 |