BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0861100 Os03g0861100|AK100706
(1256 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G43310.1 | chr5:17379735-17385387 REVERSE LENGTH=1238 270 4e-72
AT4G27430.1 | chr4:13718817-13722736 FORWARD LENGTH=1059 216 5e-56
AT1G61100.1 | chr1:22508831-22512122 REVERSE LENGTH=809 209 1e-53
AT3G14172.1 | chr3:4698860-4704773 REVERSE LENGTH=1271 161 3e-39
AT1G17360.1 | chr1:5947441-5951399 FORWARD LENGTH=1062 130 4e-30
AT1G72410.2 | chr1:27251535-27256246 REVERSE LENGTH=1271 125 2e-28
>AT5G43310.1 | chr5:17379735-17385387 REVERSE LENGTH=1238
Length = 1237
Score = 270 bits (690), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 155/383 (40%), Positives = 207/383 (54%), Gaps = 76/383 (19%)
Query: 1 MRPETRLDSAVFQLTPTRTRCDLVVIANGRKEKIASGLLNPFVAHLKVAQQQIAKGGYSI 60
M+ TRLDS FQLTPTRTRCDL+V ANG+ EKIA+GLL+PF+AHLK A+ Q+ KGGYSI
Sbjct: 1 MKSSTRLDSVAFQLTPTRTRCDLLVTANGKTEKIATGLLDPFLAHLKTAKDQLEKGGYSI 60
Query: 61 TLEVDPEIDAPWFTRGTVERFVRFVSTPEVLERVTTIESEILQIEDAITGQGGDNLGLRS 120
L+ + +A WFT+GT+ERFVRFVSTPEV+ERV T+E+EI+QI++AI Q + L
Sbjct: 61 ILKPEASDNAAWFTKGTIERFVRFVSTPEVIERVYTLETEIIQIKEAIGIQNNSEMALTV 120
Query: 121 V--------------------------EDYNEKLAECIGGSKTNYDLDGDKSLILYKPGI 154
V +D+ K A+ GS+ L+ +K+++LY+P
Sbjct: 121 VSILGLLNTFFVVWSEVLNGILYKQVKDDHRAKKADSAEGSRPLLQLNEEKAIVLYEPDS 180
Query: 155 QPPPPVQNDNATQEENSK--------------------------------VQLLRVLETR 182
P N + + +ENSK Q+++VLETR
Sbjct: 181 HPKQ--ANRSTSSDENSKYTPLRELFFGFQCFSTKRVVKYLIGNMWNCIRAQVMKVLETR 238
Query: 183 KIVLRKEQXXXXXXXXXXGFNIDNLGFLITFADRFGASRLMKACTQFTELWRRKHETGQW 242
KI+L+KEQ GF D++ LI+FA FGASRLM AC +F +LW++KHETGQW
Sbjct: 239 KIMLQKEQGMAFARAVAAGFEADDMIPLISFAKTFGASRLMDACVKFMDLWKKKHETGQW 298
Query: 243 IEVEP-EAMSARSEFPPFNASGIMFM-GDNMKQNLETLSISNGDANGEDAAKADQRTAQH 300
+E+E E M+ + N SGIMF NM E N DA T
Sbjct: 299 VEIEATEVMATQPNISTMNDSGIMFANAANMPGTPE-----NSDAKSP--------TDNK 345
Query: 301 SGAPSEYLHGPY-QSAYPPWAIH 322
EY+ G + Q Y PW +H
Sbjct: 346 RNGNQEYVQGQHRQPMYAPWPVH 368
Score = 172 bits (437), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 228/789 (28%), Positives = 345/789 (43%), Gaps = 155/789 (19%)
Query: 467 GDEYSRDEVAHR-QDGDQGNWNVFQSFLLRTEEKTKDNDADLFATE-RGPPPARRKESRT 524
G+ Y+ E A + + D G+W FQ+FLL+ ++ + + + E RG ++++
Sbjct: 480 GECYNGKERATKGTEADTGDWQAFQTFLLQDADRDERSIDHMMEKEIRG----KKRQGTG 535
Query: 525 TDDPLLLVERDSTDFNEGKTIGFNSAHGRIRSRKMLSGDELVISAEGRSFVDGDIKEIEA 584
DPL ER+S + E D +I
Sbjct: 536 KYDPLAHGERESGKYQER-----------------------------------DTADIRN 560
Query: 585 GGGGYR-RGASEDFIVYGQEKPMDSGSYLDPLAEGQYKSPT--LMEKNMHSVADESFMIP 641
G R RG+S+ +V+ +E ++ S DPL + +P L ++NM D+S+++
Sbjct: 561 GSVTRRIRGSSDSLMVHQRENGFENSS--DPLNMNGFDTPRNGLDKRNMD---DDSYIVT 615
Query: 642 VRSNSQDNLGPESCTAIDIDVELPGTVKKTTDAKAGDQLFYEPDEL--MPEREYEDVTYG 699
S+++D G AIDI E+ + TD Q+ YEP +L +PERE E ++ G
Sbjct: 616 RVSSARDEAGRNKRNAIDIGSEISSCYQ--TDGNERKQVNYEPHDLSLIPERETEKLSAG 673
Query: 700 YDPAMDYDSQMQIQPAIMVEDANADDVSLGVEGEVKKLEKDKKLRL-QECLDKKKDASAR 758
YDPA+++ S+ + +++ A G KKL KD K RL ++ DK+K
Sbjct: 674 YDPALEFGSKA------LKKNSQA-------AGGAKKLVKDPKSRLSKDAADKRKAPGPI 720
Query: 759 R--LPSSKTRLTDAQKRAQNLRAYKADXXXXXXXXXXXXXXXXXXXXQERQKRIAARSST 816
R P+ + L +A+ RA LR +KAD ERQKRIA++S++
Sbjct: 721 RKGRPTKMSPLDEARARADKLRNFKADLQKMKKEKEEEDRKRIEALKIERQKRIASKSNS 780
Query: 817 SNSIST-PQQXXXXXXXXXXXXXXXXXXFSDAEPGSFSPLRKLPARTTA--ESDHQ---K 870
+ S P Q FSD+EPGS SPL++LP RTT+ +D Q K
Sbjct: 781 AVGQSQLPAQQTKKQILNKFSPGSRASKFSDSEPGSLSPLQRLPRRTTSLGSNDFQKFPK 840
Query: 871 TGKASKLXXXXXXXXXXXXXXLAAMKKE-------------------KNGRNELSSE--- 908
GK S + L K+E + R L ++
Sbjct: 841 NGKLSTVSKSTGNMLTRSISPLPPAKRESIATGIRLTRSISPLPLSKRETRVSLDTQNKS 900
Query: 909 --RLKKLAEPKSNALTDRPSNSKFASMDHSRRKSMPEDTQTKKISAIMQLDQRKSATLPE 966
+ ++L+EPK T PS+S + RK+ + + KK+SAI+ D K A+LPE
Sbjct: 901 VSQTRRLSEPKMGN-TSAPSSSVRPRRTIASRKA-SDAPEIKKLSAIVNYDIAKIASLPE 958
Query: 967 LKVKSPRAPS-ISVKNKTIAREIRDG-DPGGKSPPTLEVTDGKKADVEVSRISNSDDNVV 1024
LK+K + PS + VK + G +P G +L D D+ V
Sbjct: 959 LKIKPTKGPSNVMVKGVEKTKSSASGIEPSGNKNKSLCQND-------------IDETPV 1005
Query: 1025 VEKTVVILENEVVSTPPLILPPGRTSENETSSND--RTQKPSMELEYTAIRAPPSPAVLP 1082
VEKTVV ++LP S + S D + +K + E + IR V
Sbjct: 1006 VEKTVV-----------MVLP----SSARSISRDQVKNEKSDVVSENSTIRE----GVDK 1046
Query: 1083 EAENPTIHRHNDQGNYEVMT--EHLKDETEE-----LTLSAVEKPYQAPFARVTSLENDS 1135
E + + GN V+ E L D E + S V KPY+AP+ARV+SLE D
Sbjct: 1047 EG---IVETMQECGNDLVLVRLETLSDLVTETPKFLTSQSIVAKPYEAPYARVSSLE-DP 1102
Query: 1136 ATIHAYPHALPVESETPVHAESIRARVLDPVSTVSVEETPEANEKPRNKE--SKGFRKLL 1193
T+++ P S E +VL P +S EA+EK + KE SKG RKLL
Sbjct: 1103 CTVYSDCSQAPPPSLYSNETEQETVKVLVPEKKIS-----EASEKSQTKESASKGLRKLL 1157
Query: 1194 KFGRKSHTS 1202
KFG+KS +S
Sbjct: 1158 KFGKKSQSS 1166
>AT4G27430.1 | chr4:13718817-13722736 FORWARD LENGTH=1059
Length = 1058
Score = 216 bits (551), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 135/328 (41%), Positives = 175/328 (53%), Gaps = 32/328 (9%)
Query: 1 MRPETRLDSAVFQLTPTRTRCDLVVIANGRKEKIASGLLNPFVAHLKVAQQQIAKGGYSI 60
M P TRLD A+FQLTPTRTRCDLV+ + G EK+ASG+ PFV HLK QI+KGGYS+
Sbjct: 1 MDPRTRLDYALFQLTPTRTRCDLVIFSGGENEKLASGIFQPFVTHLKSVSDQISKGGYSV 60
Query: 61 TLEVDPEIDAPWFTRGTVERFVRFVSTPEVLERVTTIESEILQIEDAITGQGGDNLGLRS 120
TL + PWFT+ T++RFVRFV+TPEVLER T+E EI QIED+I G
Sbjct: 61 TLRPS-SVGVPWFTKVTLQRFVRFVTTPEVLERSVTLEKEIEQIEDSIQANAAAIAGEAE 119
Query: 121 VEDYNEKLAECIGGSKTNYDLDGDKSLILYKPGIQPPPPVQNDNATQEENSKVQLLRVLE 180
+ +GG+ T+ KS L K + D T EENSKV L RVLE
Sbjct: 120 GNE--------LGGTWTS-----QKSTALSK------TKGETDGDTVEENSKVGLQRVLE 160
Query: 181 TRKIVLRKEQXXXXXXXXXXGFNIDNLGFLITFADRFGASRLMKACTQFTELWRRKHETG 240
RK L KEQ GF +D + L +FAD FGASRL +AC F +L +RK+E
Sbjct: 161 NRKAALCKEQAMAYARALVVGFELDYMDDLFSFADAFGASRLREACVNFVDLCKRKNEDR 220
Query: 241 QWIEVEPEAMSA--RSEFPPFNASGIMFMGDNMKQNLETLSISNG---DANGEDAAKADQ 295
W++ + AM A R E SGI+ G+ L ++ +G DA+ + + + Q
Sbjct: 221 MWVD-QITAMQAFPRPELTFMGDSGIVLAGEE-NDLLNATNVKHGNSMDASSQGSFETGQ 278
Query: 296 RTAQHSGAPS-----EYLHGPYQSAYPP 318
P +Y+ YPP
Sbjct: 279 EGRAQMAMPWPNQFPQYMQNFQGHGYPP 306
>AT1G61100.1 | chr1:22508831-22512122 REVERSE LENGTH=809
Length = 808
Score = 209 bits (531), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/333 (39%), Positives = 178/333 (53%), Gaps = 46/333 (13%)
Query: 7 LDSAVFQLTPTRTRCDLVVIANGRKEKIASGLLNPFVAHLKVAQQQIAKGGYSITLEVDP 66
LDSA+FQLTPTRTR DLV+ +KEK+ASG+ PFV+HLK A+ QI+KGGYSI+L P
Sbjct: 7 LDSALFQLTPTRTRFDLVLFCGSKKEKLASGIFEPFVSHLKFARDQISKGGYSISL-TPP 65
Query: 67 EIDAPWFTRGTVERFVRFVSTPEVLERVTTIESEILQIEDAI----TGQGGDNLGLRSVE 122
+ WFT+ T +RFVRFV+TP ++ER T+E EILQIE++I D L L+
Sbjct: 66 SSHSSWFTKSTFDRFVRFVNTPAIIERFATLEKEILQIENSIQANEIANAADALQLQD-- 123
Query: 123 DYNEKLAECIGGSKTNYDLDGDKSLILYKPGIQPPPPVQNDN-ATQEENSKVQLLRVLET 181
GS + GD S L K +N N EE SK+QL R+LET
Sbjct: 124 -----------GSNS-----GDSS-NLKKSNESSKKESENGNEVVGEETSKIQLQRLLET 166
Query: 182 RKIVLRKEQXXXXXXXXXXGFNIDNLGFLITFADRFGASRLMKACTQFTELWRRKHETGQ 241
R+ +LR+EQ G+ ID++ LI FAD FGASRL +AC + ELW++KH G
Sbjct: 167 RRTLLRREQAMAYARGVVAGYEIDSIDDLILFADAFGASRLREACIMYKELWKKKHGDGL 226
Query: 242 WI-EVEPEAMSARSEFPPFNASGIMFMGDNMKQNLETLSISNGDANGEDAAKADQRTAQH 300
W+ E+ A + +SGI+ + LS++ D+ + QH
Sbjct: 227 WMAELAAVKACAPVDMSLLGSSGIILTNEGA-----ALSLNGTDSMPSNTDDKSVNLEQH 281
Query: 301 -SGAPS------------EYLH-GPYQSA-YPP 318
SG P+ +Y + PYQ YPP
Sbjct: 282 PSGVPNFQAPMGWPNHMPQYFYPSPYQGYPYPP 314
>AT3G14172.1 | chr3:4698860-4704773 REVERSE LENGTH=1271
Length = 1270
Score = 161 bits (407), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 139/257 (54%), Gaps = 37/257 (14%)
Query: 1 MRPETRLDSAVFQLTPTRTRCDLVVIANGRKEKIASGLLNPFVAHLKVAQQQIAKGGYSI 60
MRP LD AVFQL+P R+RC+L V G EK+ASGL+ PFVAHLKVA++Q+++ SI
Sbjct: 1 MRPAIPLDYAVFQLSPKRSRCELFVSTTGNTEKLASGLVKPFVAHLKVAEEQVSREVQSI 60
Query: 61 TLEVDPEIDA-PWFTRGTVERFVRFVSTPEVLERVTTIESEILQIEDAITGQGGDNLGLR 119
LEV+ +A WFT+GT+ERFVRFVSTPEVLE V+ ++ E+ Q+E A R
Sbjct: 61 RLEVESNKNAGTWFTKGTLERFVRFVSTPEVLELVSALDVEMSQLEAA-----------R 109
Query: 120 SVEDYNEKLAECIGGSKTNYDLDGDKSLILYKPGIQPPPPVQNDNATQEENSKVQLLRVL 179
+ Y E ++ +K + D P V +K +LL+ +
Sbjct: 110 KI--YGEGTSDQRSSAKDSTD-------------TTPAADV----------TKKELLKAI 144
Query: 180 ETRKIVLRKEQXXXXXXXXXXGFNIDNLGFLITFADRFGASRLMKACTQFTELWRRKHET 239
+ R +R++ GFN + L FADRFGA+RL +ACT+F L +R+ E
Sbjct: 145 DLRLAAVRQDLATACNRASAAGFNPITVSELSQFADRFGANRLNEACTKFITLCQRRPEL 204
Query: 240 GQWIEVEPEAMSARSEF 256
V E + RS +
Sbjct: 205 MSSWRVNQEEEAIRSSW 221
>AT1G17360.1 | chr1:5947441-5951399 FORWARD LENGTH=1062
Length = 1061
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 122/238 (51%), Gaps = 51/238 (21%)
Query: 1 MRPETRLDSAVFQLTPTRTRCDLVVIANGRKEKIASGLLNPFVAHLKVAQQQIAK-GGYS 59
M+ +T LD AVF+L+P +RC+L V +N +EK+ASGL+ PFV HL+V + Q +K S
Sbjct: 1 MKADTVLDYAVFELSPKYSRCELFVSSNEEREKLASGLIEPFVNHLRVIESQASKRDQSS 60
Query: 60 ITLEVD-PEIDAPWFTRGTVERFVRFVSTPEVLERVTTIESEILQIEDAITGQGGDNLGL 118
+ LEV+ E WFTR T+ERFV++V++PEVLERV T + E+ Q+E A T D+ G+
Sbjct: 61 VRLEVEQSENGESWFTRRTLERFVQYVNSPEVLERVNTFDLEMSQLEAARTLYSQDDGGV 120
Query: 119 RSVEDYNEKLAECIGGSKTNYDLDGDKSLILYKPGIQPPPPVQNDNATQEENSKVQLLRV 178
+ATQ+E L+R
Sbjct: 121 A--------------------------------------------DATQKE-----LVRA 131
Query: 179 LETRKIVLRKEQXXXXXXXXXXGFNIDNLGFLITFADRFGASRLMKACTQFTELWRRK 236
++ R ++K+ GF+ + L FADRFGA L +AC+++ L +R+
Sbjct: 132 IDLRLEAIKKDLTTAIAHASANGFDPQTVSDLQRFADRFGAHHLNEACSKYISLSQRR 189
>AT1G72410.2 | chr1:27251535-27256246 REVERSE LENGTH=1271
Length = 1270
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 119/237 (50%), Gaps = 42/237 (17%)
Query: 1 MRPETRLDSAVFQLTPTRTRCDLVVIANGRKEKIASGLLNPFVAHLKVAQQQIAK-GGYS 59
MR +T LD VF+L+P ++C+L V +N + EK+ASGL+ PFV HLKV + + + S
Sbjct: 1 MRSDTVLDYVVFELSPKHSKCELFVSSNEQTEKLASGLIQPFVNHLKVLEAKASPVAQSS 60
Query: 60 ITLEVDPEIDAPWFTRGTVERFVRFVSTPEVLERVTTIESEILQIEDAITGQGGDNLGLR 119
I LEV E WFT+ T+ERFV+FV++PE LE+V T SE+LQ+E A T
Sbjct: 61 IRLEV--EKSNTWFTKRTLERFVQFVNSPETLEKVNTYYSEMLQLEAART---------- 108
Query: 120 SVEDYNEKLAECIGGSKTNYDLDGDKSLILYKPGIQPPPPVQNDNATQEENSKVQLLRVL 179
LY + +D+ + +K +LL+ +
Sbjct: 109 -----------------------------LYSQRSEDSKFGASDDGAAADATKKELLKAI 139
Query: 180 ETRKIVLRKEQXXXXXXXXXXGFNIDNLGFLITFADRFGASRLMKACTQFTELWRRK 236
+ R ++K+ GF+ + L FADRF A L +AC+++ LW+++
Sbjct: 140 DLRLEAIKKDLTTSISHASASGFDPHTVSELKQFADRFSAHHLDEACSKYISLWKQR 196
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.311 0.129 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 24,201,485
Number of extensions: 1012673
Number of successful extensions: 2646
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 2630
Number of HSP's successfully gapped: 8
Length of query: 1256
Length of database: 11,106,569
Length adjustment: 110
Effective length of query: 1146
Effective length of database: 8,090,809
Effective search space: 9272067114
Effective search space used: 9272067114
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 118 (50.1 bits)