Os03g0858600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF668 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0858600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF668 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 369.26 | 0.903 | 6.79 | 0.389 | 2.61 | 1.13 | 0.673 | -0.467 | -0.638 | 0.793 | 1000 | 27 | 3.03 | 17.1 |
| 369.27 | 0.895 | 6.79 | 0.388 | 2.59 | 1.11 | 1.08 | -- | -0.646 | 0.803 | 1000 | 16 | 3.2 | 17 |
| 367.93 | 0.9 | 6.79 | 0.381 | 2.68 | 1.18 | -- | -0.897 | -0.637 | 0.762 | 1000 | 13 | 3.5 | 17.1 |
| 372.52 | 0.905 | 6.79 | 0.377 | 2.62 | 1.14 | -- | -- | -0.643 | 0.777 | 1000 | 13 | 3.5 | 17.1 |
| 484.05 | 1.02 | 6.69 | 0.306 | -- | -1.48 | -- | -0.732 | -0.471 | -- | 995.6 | 237 | 4.63 | 16 |
| 435.74 | 0.979 | 6.77 | 0.333 | 1.73 | -- | 1.5 | -- | -0.63 | 1.36 | -- | -- | -- | -- |
| 444.94 | 0.988 | 6.77 | 0.281 | 1.73 | -- | -- | -- | -0.638 | 1.37 | -- | -- | -- | -- |
| 455 | 0.993 | 6.79 | 0.644 | -- | -1.43 | -- | -- | -0.435 | -- | 996.4 | 339 | 3.97 | 11.8 |
| 376.24 | 0.908 | 6.8 | -- | 2.62 | 1.13 | -- | -- | -0.685 | 0.788 | 1000 | 13 | 3.5 | 17.1 |
| 628.9 | 1.17 | 6.75 | 0.349 | -- | -- | -- | -- | -0.602 | -- | -- | -- | -- | -- |
| 447.03 | 0.989 | 6.78 | -- | 1.73 | -- | -- | -- | -0.669 | 1.37 | -- | -- | -- | -- |
| 428.29 | 0.964 | 6.81 | -- | -- | -1.48 | -- | -- | -0.592 | -- | 995.4 | 287 | 5.13 | 10.2 |
| 632.12 | 1.17 | 6.76 | -- | -- | -- | -- | -- | -0.641 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 370.17 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 3 | 17 |
| 3 | 371.73 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 17 |
| 5 | 373.11 | temperature | 20.0 | 30 | > th | dose independent | rect. | 3 | 17 |
| 6 | 375.71 | wind | 5.0 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 7 | 376.06 | wind | 5.0 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 8 | 376.73 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 12 | 377.34 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 3 | 17 |
| 17 | 378.39 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 26 | 379.39 | wind | 5.0 | 14400 | > th | dose independent | rect. | 11 | 5 |
| 29 | 379.83 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 32 | 380.11 | wind | 5.0 | 14400 | < th | dose independent | rect. | 11 | 5 |
| 33 | 380.15 | wind | 5.0 | 14400 | > th | dose independent | rect. | 11 | 7 |
| 44 | 380.86 | wind | 5.0 | 14400 | < th | dose independent | rect. | 10 | 8 |
| 45 | 380.86 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 2 |
| 67 | 381.88 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 11 |
| 74 | 382.16 | temperature | 15.0 | 30 | > th | dose independent | rect. | 20 | 7 |
| 86 | 382.85 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 92 | 383.02 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 110 | 383.18 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 3 | 17 |
| 113 | 383.25 | radiation | 1.0 | 90 | < th | dose independent | rect. | 3 | 17 |
| 133 | 384.03 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 146 | 384.28 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 17 |
| 159 | 384.64 | wind | 5.0 | 14400 | > th | dose independent | rect. | 5 | 13 |
| 164 | 384.70 | wind | 5.0 | 14400 | < th | dose independent | rect. | 5 | 13 |
| 172 | 384.76 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 20 |
| 173 | 384.78 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 193 | 385.07 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 7 |
| 194 | 385.07 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 7 |
| 197 | 385.07 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 20 | 7 |
| 198 | 385.07 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 7 |
| 203 | 385.07 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 17 |
| 208 | 385.07 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 20 | 7 |
| 216 | 385.12 | wind | 5.0 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 238 | 385.43 | wind | 9.0 | 30 | < th | dose independent | rect. | 20 | 7 |
| 243 | 385.47 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 244 | 385.49 | radiation | 40.0 | 10 | < th | dose independent | rect. | 3 | 17 |
| 269 | 385.78 | wind | 5.0 | 14400 | < th | dose independent | sin | 23 | NA |
| 270 | 385.82 | wind | 5.0 | 14400 | > th | dose independent | sin | 23 | NA |
| 279 | 385.95 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 21 | 3 |
| 304 | 386.02 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 7 |
| 305 | 386.02 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 7 |
| 314 | 386.23 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 8 |
| 317 | 386.25 | wind | 5.0 | 43200 | > th | dose independent | rect. | 13 | 11 |
| 318 | 386.25 | wind | 5.0 | 43200 | < th | dose independent | rect. | 13 | 11 |
| 385 | 386.92 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 395 | 387.01 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 407 | 387.12 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 7 |
| 420 | 387.22 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 17 |
| 421 | 387.22 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 17 |
| 423 | 387.25 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 20 | 7 |
| 439 | 387.44 | radiation | 10.0 | 43200 | > th | dose dependent | rect. | 6 | 2 |
| 482 | 387.81 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 545 | 388.23 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 604 | 388.68 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 10 | 2 |
| 611 | 388.76 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 6 |
| 671 | 388.92 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 5 | 12 |
| 676 | 388.95 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 686 | 389.02 | radiation | 30.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 699 | 389.16 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 718 | 389.23 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 728 | 389.29 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 732 | 389.33 | radiation | 40.0 | 43200 | > th | dose independent | sin | 11 | NA |
| 763 | 389.46 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 805 | 389.62 | radiation | 20.0 | 43200 | > th | dose independent | sin | 11 | NA |
| 872 | 389.83 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 19 | 13 |
| 901 | 389.91 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 922 | 389.96 | wind | 5.0 | 43200 | < th | dose independent | sin | 18 | NA |
| 928 | 389.97 | radiation | 10.0 | 43200 | > th | dose dependent | sin | 11 | NA |
| 930 | 389.98 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 941 | 390.01 | temperature | 20.0 | 720 | > th | dose independent | rect. | 17 | 3 |
| 947 | 390.01 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 20 | 19 |
| 968 | 390.08 | radiation | 20.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 997 | 390.12 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |