Os03g0854400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ribonuclease III domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0854400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Ribonuclease III domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.75 | 0.344 | 8.61 | 1.19 | 0.281 | -1.88 | -0.0317 | -1.55 | 0.31 | 19 | 30.5 | 308 | -- | -- |
| 57.03 | 0.352 | 8.63 | 0.935 | 0.309 | -1.96 | 0.124 | -- | 0.302 | 16.4 | 50.15 | 458 | -- | -- |
| 53.65 | 0.341 | 8.6 | 1.21 | 0.275 | -1.87 | -- | -1.58 | 0.314 | 18.5 | 30.54 | 335 | -- | -- |
| 55.92 | 0.348 | 8.63 | 0.915 | 0.27 | -1.95 | -- | -- | 0.255 | 16.9 | 31.5 | 406 | -- | -- |
| 56.41 | 0.35 | 8.6 | 1.15 | -- | -2.1 | -- | -1.62 | 0.286 | -- | 31 | 346 | -- | -- |
| 99.44 | 0.467 | 8.57 | 1.38 | 0.824 | -- | 0.555 | -- | 0.592 | 17.6 | -- | -- | -- | -- |
| 100.2 | 0.469 | 8.57 | 1.38 | 0.827 | -- | -- | -- | 0.595 | 17.6 | -- | -- | -- | -- |
| 58.61 | 0.357 | 8.64 | 0.868 | -- | -2.17 | -- | -- | 0.214 | -- | 31.65 | 356 | -- | -- |
| 76.09 | 0.406 | 8.67 | -- | 0.203 | -2.33 | -- | -- | 0.0825 | 15.5 | 31.3 | 458 | -- | -- |
| 135.76 | 0.544 | 8.56 | 1.36 | -- | -- | -- | -- | 0.575 | -- | -- | -- | -- | -- |
| 150.54 | 0.574 | 8.6 | -- | 0.805 | -- | -- | -- | 0.441 | 17.7 | -- | -- | -- | -- |
| 76.82 | 0.408 | 8.67 | -- | -- | -2.43 | -- | -- | 0.069 | -- | 31.22 | 361 | -- | -- |
| 184.21 | 0.634 | 8.59 | -- | -- | -- | -- | -- | 0.424 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.10 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 23 |
| 11 | 54.05 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 23 |
| 12 | 54.06 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 16 | 54.26 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 19 | 54.42 | temperature | 30 | 720 | < th | dose dependent | rect. | 8 | 21 |
| 35 | 54.99 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 36 | 55.01 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 38 | 55.04 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 55 | 55.29 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 65 | 55.36 | temperature | 15 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 85 | 55.50 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 8 |
| 99 | 55.60 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 17 |
| 133 | 55.75 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 23 |
| 171 | 55.88 | temperature | 30 | 1440 | < th | dose dependent | sin | 13 | NA |
| 181 | 55.91 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 188 | 55.92 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 203 | 55.97 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 16 |
| 207 | 55.98 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 315 | 56.25 | temperature | 10 | 1440 | > th | dose dependent | sin | 11 | NA |
| 406 | 56.38 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 553 | 56.65 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 619 | 56.75 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 636 | 56.78 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |