Os03g0854000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function UPF0131 family protein.
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Os03g0854000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function UPF0131 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70.23 | 0.394 | 13.9 | 1.81 | 1.42 | -1.01 | 0.189 | -0.114 | 0.766 | 1.9 | 21.99 | 79 | -- | -- |
| 70.2 | 0.39 | 13.9 | 1.83 | 1.42 | -1.01 | 0.221 | -- | 0.772 | 1.87 | 21.91 | 91 | -- | -- |
| 70.33 | 0.391 | 13.9 | 1.8 | 1.42 | -1.01 | -- | -0.183 | 0.767 | 1.86 | 21.99 | 89 | -- | -- |
| 70.38 | 0.391 | 13.9 | 1.82 | 1.42 | -1.03 | -- | -- | 0.773 | 1.86 | 21.96 | 91 | -- | -- |
| 147.61 | 0.566 | 13.8 | 2.16 | -- | -2.36 | -- | 0.868 | 0.967 | -- | 23.35 | 9 | -- | -- |
| 87.31 | 0.438 | 13.9 | 1.62 | 1.8 | -- | 0.475 | -- | 0.607 | 2.2 | -- | -- | -- | -- |
| 88.15 | 0.44 | 13.9 | 1.6 | 1.8 | -- | -- | -- | 0.604 | 2.2 | -- | -- | -- | -- |
| 147.71 | 0.566 | 13.8 | 2.08 | -- | -2.33 | -- | -- | 0.966 | -- | 23.14 | 9 | -- | -- |
| 150.89 | 0.575 | 14 | -- | 1.62 | -0.561 | -- | -- | 0.459 | 2.14 | 25.1 | 94 | -- | -- |
| 282.18 | 0.785 | 13.9 | 1.68 | -- | -- | -- | -- | 0.647 | -- | -- | -- | -- | -- |
| 155.89 | 0.584 | 14 | -- | 1.83 | -- | -- | -- | 0.426 | 2.22 | -- | -- | -- | -- |
| 253.87 | 0.745 | 13.9 | -- | -- | -2.05 | -- | -- | 0.618 | -- | 24.47 | 8 | -- | -- |
| 356.53 | 0.881 | 13.9 | -- | -- | -- | -- | -- | 0.461 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.43 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 3 |
| 2 | 66.55 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 12 | 67.21 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 14 | 67.25 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 15 | 67.25 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 20 | 67.41 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 13 |
| 22 | 67.51 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 5 | 21 |
| 29 | 67.81 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 6 | 19 |
| 37 | 67.99 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 40 | 68.03 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 16 |
| 64 | 68.44 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 88 | 68.90 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 96 | 68.95 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 15 |
| 99 | 68.97 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 22 |
| 110 | 69.06 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 118 | 69.06 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 15 |
| 127 | 69.08 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 171 | 69.12 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 195 | 69.19 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 197 | 69.20 | temperature | 30.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 200 | 69.21 | temperature | 30.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 251 | 69.33 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 259 | 69.35 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 22 |
| 289 | 69.40 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 291 | 69.40 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 296 | 69.41 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 298 | 69.41 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 8 | 17 |
| 317 | 69.43 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 16 | 17 |
| 359 | 69.48 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 360 | 69.48 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 366 | 69.51 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 375 | 69.53 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 411 | 69.59 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 16 | 21 |
| 466 | 69.64 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 19 |
| 507 | 69.69 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 12 |
| 508 | 69.69 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 511 | 69.70 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 13 | NA |
| 517 | 69.72 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 22 | 20 |
| 527 | 69.75 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 611 | 69.79 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 693 | 69.85 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 18 | 5 |
| 698 | 69.86 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 22 | NA |
| 707 | 69.87 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 18 | 5 |
| 709 | 69.87 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 19 |
| 712 | 69.88 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 750 | 69.91 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 6 | 13 |
| 801 | 69.91 | temperature | 25.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 804 | 69.92 | temperature | 30.0 | 14400 | < th | dose independent | no | NA | NA |
| 872 | 69.94 | temperature | 30.0 | 14400 | > th | dose independent | no | NA | NA |