Os03g0853600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0853600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.73 | 0.425 | 7.89 | 0.717 | 2.44 | -0.781 | -0.3 | 0.996 | 0.455 | 21.7 | 16.47 | 710 | -- | -- |
| 82.69 | 0.424 | 7.91 | 0.616 | 2.43 | -0.742 | 0.000337 | -- | 0.427 | 21.7 | 17.26 | 633 | -- | -- |
| 82.01 | 0.422 | 7.89 | 0.687 | 2.44 | -0.791 | -- | 0.807 | 0.452 | 21.7 | 16.58 | 663 | -- | -- |
| 82.38 | 0.423 | 7.91 | 0.529 | 2.44 | -0.779 | -- | -- | 0.405 | 21.7 | 16.34 | 647 | -- | -- |
| 349.05 | 0.875 | 7.81 | 0.783 | -- | -1.6 | -- | 0.791 | 0.542 | -- | 16.58 | 663 | -- | -- |
| 90.9 | 0.447 | 7.94 | 0.324 | 2.25 | -- | -0.164 | -- | 0.276 | 21.8 | -- | -- | -- | -- |
| 91 | 0.447 | 7.94 | 0.33 | 2.25 | -- | -- | -- | 0.276 | 21.8 | -- | -- | -- | -- |
| 349.67 | 0.875 | 7.82 | 0.662 | -- | -1.58 | -- | -- | 0.508 | -- | 16.58 | 663 | -- | -- |
| 89.01 | 0.439 | 7.93 | -- | 2.38 | -0.506 | -- | -- | 0.316 | 21.7 | 18.8 | 597 | -- | -- |
| 393.95 | 0.927 | 7.87 | 0.354 | -- | -- | -- | -- | 0.275 | -- | -- | -- | -- | -- |
| 93.88 | 0.453 | 7.94 | -- | 2.25 | -- | -- | -- | 0.239 | 21.9 | -- | -- | -- | -- |
| 360.13 | 0.887 | 7.84 | -- | -- | -1.27 | -- | -- | 0.412 | -- | 18.8 | 597 | -- | -- |
| 397.26 | 0.93 | 7.88 | -- | -- | -- | -- | -- | 0.236 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.80 | humidity | 80.0 | 270 | > th | dose independent | rect. | 3 | 6 |
| 3 | 71.97 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 3 | 5 |
| 11 | 72.86 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 3 | 6 |
| 12 | 72.97 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 6 |
| 13 | 72.99 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 3 | 6 |
| 21 | 73.34 | radiation | 1.0 | 90 | < th | dose dependent | sin | 10 | NA |
| 23 | 73.43 | radiation | 1.0 | 90 | < th | dose independent | sin | 11 | NA |
| 27 | 73.58 | radiation | 1.0 | 90 | > th | dose independent | sin | 11 | NA |
| 39 | 74.10 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 15 | 17 |
| 50 | 74.45 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 64 | 74.72 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 5 |
| 71 | 74.80 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 73 | 74.86 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 87 | 75.15 | radiation | 10.0 | 270 | < th | dose independent | rect. | 4 | 3 |
| 88 | 75.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 4 |
| 89 | 75.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 90 | 75.16 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 9 |
| 95 | 75.19 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 3 |
| 112 | 75.35 | radiation | 1.0 | 90 | < th | dose independent | rect. | 21 | 9 |
| 119 | 75.38 | radiation | 1.0 | 90 | > th | dose independent | rect. | 18 | 14 |
| 121 | 75.41 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 20 |
| 122 | 75.41 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 134 | 75.56 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 136 | 75.57 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 138 | 75.57 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 139 | 75.57 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 141 | 75.57 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 142 | 75.57 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 145 | 75.57 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 163 | 75.70 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 13 |
| 168 | 75.71 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 19 |
| 169 | 75.72 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 18 |
| 175 | 75.75 | temperature | 20.0 | 30 | > th | dose independent | rect. | 5 | 17 |
| 195 | 75.81 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 198 | 75.84 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 210 | 75.85 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 17 | 16 |
| 225 | 75.98 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 239 | 76.08 | temperature | 25.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 272 | 76.21 | radiation | 1.0 | 90 | < th | dose independent | rect. | 21 | 13 |
| 280 | 76.23 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 18 |
| 288 | 76.27 | radiation | 1.0 | 90 | < th | dose independent | rect. | 21 | 18 |
| 302 | 76.34 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 9 |
| 324 | 76.45 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 16 |
| 325 | 76.45 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 16 |
| 339 | 76.50 | radiation | 20.0 | 270 | < th | dose independent | rect. | 15 | 17 |
| 361 | 76.62 | wind | 7.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 362 | 76.62 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 8 |
| 364 | 76.62 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 8 |
| 371 | 76.65 | temperature | 20.0 | 270 | > th | dose independent | rect. | 14 | 18 |
| 372 | 76.65 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 22 | 8 |
| 385 | 76.72 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 400 | 76.76 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 22 | 8 |
| 411 | 76.79 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 19 | 8 |
| 413 | 76.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 414 | 76.80 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 415 | 76.80 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 416 | 76.80 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 417 | 76.80 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 423 | 76.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 16 |
| 424 | 76.80 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 16 |
| 429 | 76.80 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 17 |
| 430 | 76.81 | humidity | 70.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 452 | 76.91 | wind | 7.0 | 270 | < th | dose independent | rect. | 22 | 15 |
| 479 | 76.95 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 8 | 19 |
| 488 | 76.96 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 8 |
| 490 | 76.96 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 494 | 76.98 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 495 | 76.98 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 500 | 77.00 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 517 | 77.05 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 21 | 6 |
| 524 | 77.08 | radiation | 30.0 | 90 | < th | dose independent | rect. | 5 | 6 |
| 525 | 77.08 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 16 |
| 527 | 77.08 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 535 | 77.10 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 554 | 77.17 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 9 |
| 572 | 77.24 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 17 |
| 580 | 77.28 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 21 | 8 |
| 582 | 77.28 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 12 |
| 613 | 77.37 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 18 | 13 |
| 616 | 77.38 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 634 | 77.39 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 20 | 10 |
| 684 | 77.49 | wind | 5.0 | 10 | < th | dose dependent | rect. | 6 | 3 |
| 685 | 77.49 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 13 | 14 |
| 688 | 77.50 | temperature | 20.0 | 10 | > th | dose independent | rect. | 17 | 16 |
| 711 | 77.56 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 737 | 77.59 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 6 |
| 739 | 77.60 | wind | 3.0 | 10 | < th | dose independent | rect. | 6 | 3 |
| 740 | 77.60 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 760 | 77.65 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 22 |
| 790 | 77.68 | wind | 1.0 | 270 | > th | dose independent | rect. | 8 | 19 |
| 823 | 77.73 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 16 |
| 824 | 77.73 | temperature | 25.0 | 10 | > th | dose independent | rect. | 15 | 18 |
| 827 | 77.74 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 849 | 77.77 | wind | 9.0 | 270 | < th | dose dependent | rect. | 8 | 6 |
| 916 | 77.86 | radiation | 30.0 | 270 | < th | dose independent | rect. | 12 | 21 |
| 919 | 77.87 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 8 |
| 930 | 77.89 | temperature | 10.0 | 270 | > th | dose independent | rect. | 22 | 15 |
| 931 | 77.89 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 22 | 15 |
| 998 | 78.02 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 8 |