Os03g0852200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Der1-like domain containing protein.
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Os03g0852200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Der1-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.99 | 0.205 | 12 | 0.332 | 0.247 | -0.709 | -0.138 | -0.922 | 0.196 | 23.8 | 22.8 | 20 | -- | -- |
| 19.44 | 0.205 | 11.9 | 0.455 | 0.246 | -0.793 | 0.00847 | -- | 0.236 | 23.6 | 23 | 24 | -- | -- |
| 19.04 | 0.203 | 11.9 | 0.361 | 0.245 | -0.717 | -- | -0.757 | 0.202 | 23.7 | 22.97 | 19 | -- | -- |
| 19.41 | 0.205 | 11.9 | 0.475 | 0.234 | -0.784 | -- | -- | 0.236 | 23.6 | 23.1 | 19 | -- | -- |
| 21.96 | 0.219 | 11.9 | 0.423 | -- | -0.902 | -- | -0.575 | 0.238 | -- | 22.83 | 14 | -- | -- |
| 28.83 | 0.252 | 12 | 0.334 | 0.499 | -- | 0.213 | -- | 0.123 | 1.49 | -- | -- | -- | -- |
| 29.01 | 0.252 | 12 | 0.327 | 0.498 | -- | -- | -- | 0.121 | 1.47 | -- | -- | -- | -- |
| 22.18 | 0.22 | 11.9 | 0.504 | -- | -0.94 | -- | -- | 0.26 | -- | 23.1 | 19 | -- | -- |
| 24.98 | 0.233 | 12 | -- | 0.283 | -0.652 | -- | -- | 0.161 | 0.167 | 23.63 | 22 | -- | -- |
| 44.26 | 0.311 | 12 | 0.347 | -- | -- | -- | -- | 0.132 | -- | -- | -- | -- | -- |
| 31.83 | 0.264 | 12 | -- | 0.504 | -- | -- | -- | 0.085 | 1.5 | -- | -- | -- | -- |
| 28.61 | 0.25 | 11.9 | -- | -- | -0.856 | -- | -- | 0.183 | -- | 23.69 | 12 | -- | -- |
| 47.44 | 0.321 | 12 | -- | -- | -- | -- | -- | 0.0936 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.28 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 8 | 3 |
| 3 | 18.33 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 8 | 18.43 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 1 | 10 |
| 10 | 18.45 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 3 | 8 |
| 28 | 18.60 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 29 | 18.61 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 12 | 2 |
| 45 | 18.78 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 11 |
| 51 | 18.79 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 7 |
| 63 | 18.82 | temperature | 25.0 | 720 | > th | dose dependent | sin | 9 | NA |
| 71 | 18.85 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 12 | 2 |
| 87 | 18.87 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 101 | 18.94 | temperature | 30.0 | 1440 | < th | dose independent | sin | 5 | NA |
| 105 | 18.96 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 125 | 18.98 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 143 | 19.04 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 194 | 19.13 | temperature | 30.0 | 1440 | > th | dose independent | sin | 4 | NA |
| 263 | 19.18 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 3 | 21 |
| 270 | 19.20 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 277 | 19.21 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 298 | 19.23 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 6 | 3 |
| 303 | 19.23 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 357 | 19.27 | temperature | 30.0 | 1440 | < th | dose independent | no | NA | NA |
| 382 | 19.27 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 21 |
| 464 | 19.30 | temperature | 20.0 | 30 | > th | dose dependent | no | NA | NA |
| 489 | 19.33 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 5 |
| 490 | 19.33 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 5 |
| 492 | 19.33 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 9 | 9 |
| 493 | 19.33 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 9 | 9 |
| 499 | 19.33 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 5 |
| 500 | 19.33 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 9 | 9 |
| 513 | 19.37 | temperature | 30.0 | 1440 | > th | dose independent | no | NA | NA |
| 650 | 19.40 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 12 | 23 |
| 690 | 19.45 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 24 | 20 |
| 694 | 19.46 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 6 | 14 |
| 699 | 19.46 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 1 | 18 |
| 750 | 19.49 | temperature | 10.0 | 30 | > th | dose dependent | no | NA | NA |
| 811 | 19.53 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 3 | 19 |
| 813 | 19.53 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 7 | 19 |
| 828 | 19.54 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 6 | 12 |
| 831 | 19.54 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 878 | 19.57 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 972 | 19.62 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 984 | 19.63 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 991 | 19.64 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 992 | 19.64 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 7 | 23 |