Os03g0851800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Pantoate--beta-alanine ligase (EC 6.3.2.1) (Pantothenate synthetase) (Pantoate activating enzyme).
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Os03g0851800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Pantoate--beta-alanine ligase (EC 6.3.2.1) (Pantothenate synthetase) (Pantoate activating enzyme).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.42 | 0.302 | 12.9 | -0.499 | 0.371 | -1.1 | 0.077 | 0.85 | -0.405 | 3.98 | 78.97 | 1072 | -- | -- |
| 42.13 | 0.302 | 12.9 | -0.567 | 0.368 | -1.04 | 0.209 | -- | -0.409 | 3.96 | 80.36 | 1099 | -- | -- |
| 41.42 | 0.3 | 12.9 | -0.496 | 0.373 | -1.1 | -- | 0.863 | -0.404 | 4.08 | 79 | 1078 | -- | -- |
| 42.12 | 0.302 | 12.9 | -0.569 | 0.392 | -0.997 | -- | -- | -0.409 | 4.53 | 80.02 | 1125 | -- | -- |
| 47.85 | 0.322 | 12.9 | -0.508 | -- | -1.05 | -- | 0.873 | -0.398 | -- | 78.06 | 952 | -- | -- |
| 61.62 | 0.368 | 12.9 | -0.719 | 0.372 | -- | -0.554 | -- | -0.373 | 7.22 | -- | -- | -- | -- |
| 62.38 | 0.37 | 12.9 | -0.732 | 0.375 | -- | -- | -- | -0.372 | 6.89 | -- | -- | -- | -- |
| 48.62 | 0.325 | 12.9 | -0.582 | -- | -0.958 | -- | -- | -0.411 | -- | 79 | 939 | -- | -- |
| 50.33 | 0.33 | 12.9 | -- | 0.396 | -1.07 | -- | -- | -0.354 | 4.48 | 79 | 1141 | -- | -- |
| 69.74 | 0.39 | 12.9 | -0.724 | -- | -- | -- | -- | -0.365 | -- | -- | -- | -- | -- |
| 76.49 | 0.409 | 12.9 | -- | 0.366 | -- | -- | -- | -0.291 | 7.01 | -- | -- | -- | -- |
| 57.12 | 0.352 | 12.9 | -- | -- | -1.08 | -- | -- | -0.357 | -- | 77.48 | 996 | -- | -- |
| 83.55 | 0.427 | 12.9 | -- | -- | -- | -- | -- | -0.285 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.72 | humidity | 80 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 2 | 41.73 | radiation | 30 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 5 | 42.01 | radiation | 20 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 9 | 42.12 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 19 |
| 14 | 42.35 | humidity | 80 | 720 | < th | dose dependent | rect. | 17 | 5 |
| 16 | 42.37 | humidity | 80 | 720 | < th | dose dependent | rect. | 17 | 7 |
| 48 | 42.98 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 49 | 43.01 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 74 | 43.19 | humidity | 50 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 81 | 43.26 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 22 |
| 86 | 43.33 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 94 | 43.38 | humidity | 50 | 1440 | > th | dose dependent | rect. | 17 | 3 |
| 95 | 43.38 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 99 | 43.43 | humidity | 50 | 1440 | > th | dose independent | sin | 11 | NA |
| 101 | 43.45 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 20 |
| 107 | 43.48 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 19 |
| 117 | 43.56 | humidity | 50 | 1440 | > th | dose independent | rect. | 15 | 9 |
| 122 | 43.58 | humidity | 50 | 1440 | < th | dose independent | sin | 11 | NA |
| 181 | 43.69 | humidity | 50 | 1440 | > th | dose independent | rect. | 17 | 10 |
| 201 | 43.73 | humidity | 80 | 720 | < th | dose dependent | sin | 12 | NA |
| 224 | 43.75 | humidity | 50 | 1440 | > th | dose independent | rect. | 7 | 10 |
| 236 | 43.78 | humidity | 50 | 1440 | > th | dose independent | rect. | 19 | 22 |
| 252 | 43.81 | radiation | 40 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 293 | 43.89 | radiation | 40 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 370 | 43.98 | humidity | 50 | 1440 | > th | dose dependent | rect. | 6 | 16 |
| 371 | 43.99 | humidity | 70 | 720 | > th | dose independent | sin | 11 | NA |
| 417 | 44.11 | humidity | 90 | 1440 | < th | dose dependent | rect. | 6 | 16 |
| 420 | 44.12 | radiation | 10 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 430 | 44.15 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 8 |
| 442 | 44.18 | humidity | 70 | 720 | < th | dose independent | sin | 12 | NA |
| 455 | 44.22 | humidity | 50 | 1440 | < th | dose independent | rect. | 10 | 7 |
| 483 | 44.26 | radiation | 30 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 507 | 44.28 | radiation | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 550 | 44.34 | humidity | 50 | 1440 | > th | dose independent | rect. | 8 | 16 |
| 689 | 44.41 | humidity | 60 | 1440 | < th | dose dependent | sin | 11 | NA |
| 751 | 44.44 | humidity | 50 | 1440 | > th | dose independent | no | NA | NA |
| 799 | 44.45 | humidity | 50 | 1440 | > th | dose independent | rect. | 10 | 23 |
| 803 | 44.45 | humidity | 50 | 1440 | > th | dose independent | rect. | 23 | 23 |
| 827 | 44.46 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 864 | 44.48 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 20 |
| 880 | 44.49 | temperature | 10 | 90 | > th | dose dependent | rect. | 2 | 17 |
| 910 | 44.51 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 911 | 44.51 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 982 | 44.55 | wind | 3 | 43200 | < th | dose independent | rect. | 2 | 2 |